RNA–Protein interactions for RNA: ENST00000638160.1

CHML-205, Transcript of CHM like, Rab escort protein 2, humanhuman

TSL 3 BASIC

Gene CHML, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHML-205ENST00000638160 USP42Q9H9J4 1324 aaKnown RBP35.45■■■■□ 3.27
CHML-205ENST00000638160 ZPR1O75312 459 aa35.43■■■■□ 3.26
CHML-205ENST00000638160 SRP68Q9UHB9 627 aaKnown RBP35.43■■■■□ 3.26
CHML-205ENST00000638160 CANXP27824 592 aaKnown RBP35.42■■■■□ 3.26
CHML-205ENST00000638160 RIPK4P57078 832 aa35.42■■■■□ 3.26
CHML-205ENST00000638160 SNRPA1P09661 255 aaKnown RBP35.41■■■■□ 3.26
CHML-205ENST00000638160 ADAMTS8Q9UP79 889 aa35.41■■■■□ 3.26
CHML-205ENST00000638160 TMPOP42166 694 aaKnown RBP35.4■■■■□ 3.26
CHML-205ENST00000638160 RUNDC1Q96C34 613 aa35.4■■■■□ 3.26
CHML-205ENST00000638160 EIF5P55010 431 aaKnown RBP35.39■■■■□ 3.26
CHML-205ENST00000638160 GPR162Q16538 588 aa35.39■■■■□ 3.26
CHML-205ENST00000638160 NARFQ9UHQ1 456 aa35.39■■■■□ 3.26
CHML-205ENST00000638160 DLG5Q8TDM6 1919 aa35.39■■■■□ 3.26
CHML-205ENST00000638160 COL15A1P39059 1388 aa35.38■■■■□ 3.26
CHML-205ENST00000638160 LMOD3Q0VAK6 560 aa35.38■■■■□ 3.25
CHML-205ENST00000638160 MIS18AQ9NYP9 233 aa35.38■■■■□ 3.25
CHML-205ENST00000638160 PARP3Q9Y6F1 533 aa35.38■■■■□ 3.25
CHML-205ENST00000638160 C4AP0C0L4 1744 aa35.37■■■■□ 3.25
CHML-205ENST00000638160 A0A087WZG4 1122 aa35.37■■■■□ 3.25
CHML-205ENST00000638160 FKBP8Q14318 412 aa35.37■■■■□ 3.25
CHML-205ENST00000638160 CCDC146Q8IYE0 955 aa35.37■■■■□ 3.25
CHML-205ENST00000638160 THUMPD2Q9BTF0 503 aaKnown RBP35.37■■■■□ 3.25
CHML-205ENST00000638160 USPL1Q5W0Q7 1092 aa35.36■■■■□ 3.25
CHML-205ENST00000638160 USP16Q9Y5T5 823 aa35.36■■■■□ 3.25
CHML-205ENST00000638160 A1BGP04217 495 aa35.35■■■■□ 3.25
CHML-205ENST00000638160 IL6STP40189 918 aaPredicted RBP35.35■■■■□ 3.25
CHML-205ENST00000638160 NPM2Q86SE8 214 aaKnown RBP35.32■■■■□ 3.24
CHML-205ENST00000638160 TM4SF1P30408 202 aa35.31■■■■□ 3.24
CHML-205ENST00000638160 PELP1Q8IZL8 1130 aaKnown RBP35.31■■■■□ 3.24
CHML-205ENST00000638160 PRAMEF22A3QJZ6 481 aa35.3■■■■□ 3.24
CHML-205ENST00000638160 RRP7AQ9Y3A4 280 aaKnown RBP35.3■■■■□ 3.24
CHML-205ENST00000638160 ANP32CO43423 234 aa35.29■■■■□ 3.24
CHML-205ENST00000638160 NEUROD2Q15784 382 aa35.29■■■■□ 3.24
CHML-205ENST00000638160 BABAM1Q9NWV8 329 aa35.29■■■■□ 3.24
CHML-205ENST00000638160 EIF4A1P60842 406 aaKnown RBP35.28■■■■□ 3.24
CHML-205ENST00000638160 ZNF330Q9Y3S2 320 aaPredicted RBP35.28■■■■□ 3.24
CHML-205ENST00000638160 TGFB2P61812 414 aa35.27■■■■□ 3.24
CHML-205ENST00000638160 BCL2L12Q9HB09 334 aa35.27■■■■□ 3.24
CHML-205ENST00000638160 YY1P25490 414 aa35.26■■■■□ 3.24
CHML-205ENST00000638160 DDR1Q08345 913 aa35.26■■■■□ 3.24
CHML-205ENST00000638160 GRIN3BO60391 1043 aa35.25■■■■□ 3.23
CHML-205ENST00000638160 GIGYF1O75420 1035 aaPredicted RBP35.25■■■■□ 3.23
CHML-205ENST00000638160 TSPYL4Q9UJ04 414 aa35.25■■■■□ 3.23
CHML-205ENST00000638160 POLRMTO00411 1230 aaKnown RBP35.24■■■■□ 3.23
CHML-205ENST00000638160 TBC1D2BQ9UPU7 963 aa35.24■■■■□ 3.23
CHML-205ENST00000638160 NFIXQ14938 502 aa35.23■■■■□ 3.23
CHML-205ENST00000638160 C10orf71Q711Q0 1435 aa35.23■■■■□ 3.23
CHML-205ENST00000638160 YBX3P16989 372 aaKnown RBP eCLIP35.22■■■■□ 3.23
CHML-205ENST00000638160 TRIM35Q9UPQ4 493 aa35.22■■■■□ 3.23
CHML-205ENST00000638160 KDM3BQ7LBC6 1761 aa35.2■■■■□ 3.23
CHML-205ENST00000638160 CCDC184Q52MB2 194 aa35.2■■■■□ 3.23
CHML-205ENST00000638160 UTRNP46939 3433 aa35.2■■■■□ 3.23
CHML-205ENST00000638160 PIP4K2AP48426 406 aaPredicted RBP35.19■■■■□ 3.22
CHML-205ENST00000638160 NBPF26B4DH59 902 aa35.18■■■■□ 3.22
CHML-205ENST00000638160 NBPF10Q6P3W6 841 aaKnown RBP35.18■■■■□ 3.22
CHML-205ENST00000638160 DZIP3Q86Y13 1208 aaKnown RBP35.18■■■■□ 3.22
CHML-205ENST00000638160 NBPF15Q8N660 670 aa35.18■■■■□ 3.22
CHML-205ENST00000638160 KIF13BQ9NQT8 1826 aa35.16■■■■□ 3.22
CHML-205ENST00000638160 APAF1O14727 1248 aa35.16■■■■□ 3.22
CHML-205ENST00000638160 CAMTA2O94983 1202 aa35.16■■■■□ 3.22
CHML-205ENST00000638160 A0A0G2JLW4 131 aa35.15■■■■□ 3.22
CHML-205ENST00000638160 SERPINB2P05120 415 aa35.15■■■■□ 3.22
CHML-205ENST00000638160 PXDNLA1KZ92 1463 aa35.15■■■■□ 3.22
CHML-205ENST00000638160 CHL1O00533 1208 aa35.14■■■■□ 3.22
CHML-205ENST00000638160 DPEP1P16444 411 aa35.13■■■■□ 3.21
CHML-205ENST00000638160 TBC1D9BQ66K14 1250 aa35.13■■■■□ 3.21
CHML-205ENST00000638160 BICDL1Q6ZP65 573 aa35.13■■■■□ 3.21
CHML-205ENST00000638160 CLEC4GQ6UXB4 293 aa35.12■■■■□ 3.21
CHML-205ENST00000638160 MRS2Q9HD23 443 aa35.12■■■■□ 3.21
CHML-205ENST00000638160 GOLGB1Q14789 3259 aaKnown RBP35.12■■■■□ 3.21
CHML-205ENST00000638160 RGL2O15211 777 aa35.11■■■■□ 3.21
CHML-205ENST00000638160 WWC3Q9ULE0 1092 aa35.1■■■■□ 3.21
CHML-205ENST00000638160 ZNF652Q9Y2D9 606 aa35.1■■■■□ 3.21
CHML-205ENST00000638160 LAS1LQ9Y4W2 734 aaKnown RBP35.1■■■■□ 3.21
CHML-205ENST00000638160 SETDB2Q96T68 719 aa35.09■■■■□ 3.21
CHML-205ENST00000638160 ERBB4Q15303 1308 aa35.08■■■■□ 3.21
CHML-205ENST00000638160 CHD4Q14839 1912 aa35.07■■■■□ 3.2
CHML-205ENST00000638160 CFAP44Q96MT7 982 aa35.07■■■■□ 3.2
CHML-205ENST00000638160 LAMB4A4D0S4 1761 aa35.06■■■■□ 3.2
CHML-205ENST00000638160 SCN7AQ01118 1682 aa35.06■■■■□ 3.2
CHML-205ENST00000638160 CARMIL3Q8ND23 1372 aa35.06■■■■□ 3.2
CHML-205ENST00000638160 KCNA3P22001 575 aa35.06■■■■□ 3.2
CHML-205ENST00000638160 CALD1Q05682 793 aaKnown RBP35.06■■■■□ 3.2
CHML-205ENST00000638160 PIM2Q9P1W9 311 aa35.05■■■■□ 3.2
CHML-205ENST00000638160 KIAA1551Q9HCM1 1747 aa35.03■■■■□ 3.2
CHML-205ENST00000638160 BCS1LQ9Y276 419 aa35.03■■■■□ 3.2
CHML-205ENST00000638160 NRXN2Q9P2S2 1712 aa35.03■■■■□ 3.2
CHML-205ENST00000638160 EIF2S2P20042 333 aaKnown RBP35.02■■■■□ 3.2
CHML-205ENST00000638160 NGEFQ8N5V2 710 aa35.02■■■■□ 3.2
CHML-205ENST00000638160 N4BP2Q86UW6 1770 aaPredicted RBP35.02■■■■□ 3.2
CHML-205ENST00000638160 MYL6BP14649 208 aa35.01■■■■□ 3.2
CHML-205ENST00000638160 AFDNP55196 1824 aaKnown RBP35.01■■■■□ 3.19
CHML-205ENST00000638160 ERVV-1B6SEH8 477 aa35■■■■□ 3.19
CHML-205ENST00000638160 CHRNA5P30532 468 aa35■■■■□ 3.19
CHML-205ENST00000638160 ZNF853P0CG23 659 aa34.99■■■■□ 3.19
CHML-205ENST00000638160 IFT57Q9NWB7 429 aa34.99■■■■□ 3.19
CHML-205ENST00000638160 DALRD3Q5D0E6 543 aaKnown RBP34.98■■■■□ 3.19
CHML-205ENST00000638160 PRR5LQ6MZQ0 368 aa34.98■■■■□ 3.19
CHML-205ENST00000638160 KIF6Q6ZMV9 814 aa34.98■■■■□ 3.19
CHML-205ENST00000638160 BRIP1Q9BX63 1249 aa34.98■■■■□ 3.19
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms