RNA–Protein interactions for RNA: ENST00000637937.1

CTSD-214, Transcript of cathepsin D, humanhuman

TSL 5

Gene CTSD, Length 1,262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSD-214ENST00000637937 CICQ96RK0 1608 aaPredicted RBP22.5■■□□□ 1.19
CTSD-214ENST00000637937 KCNQ3O43525 872 aa22.5■■□□□ 1.19
CTSD-214ENST00000637937 USPL1Q5W0Q7 1092 aa22.5■■□□□ 1.19
CTSD-214ENST00000637937 ZEB1P37275 1124 aaPredicted RBP22.49■■□□□ 1.19
CTSD-214ENST00000637937 MAPK8IP3Q9UPT6 1336 aa22.49■■□□□ 1.19
CTSD-214ENST00000637937 PLEKHF1Q96S99 279 aa22.48■■□□□ 1.19
CTSD-214ENST00000637937 MYBBP1AQ9BQG0 1328 aaKnown RBP22.48■■□□□ 1.19
CTSD-214ENST00000637937 COL15A1P39059 1388 aa22.48■■□□□ 1.19
CTSD-214ENST00000637937 NARFQ9UHQ1 456 aa22.46■■□□□ 1.19
CTSD-214ENST00000637937 ZNF330Q9Y3S2 320 aaPredicted RBP22.46■■□□□ 1.19
CTSD-214ENST00000637937 TGFB2P61812 414 aa22.45■■□□□ 1.18
CTSD-214ENST00000637937 TAF7Q15545 349 aaPredicted RBP22.45■■□□□ 1.18
CTSD-214ENST00000637937 NFE2L2Q16236 605 aa22.45■■□□□ 1.18
CTSD-214ENST00000637937 NPM2Q86SE8 214 aaKnown RBP22.45■■□□□ 1.18
CTSD-214ENST00000637937 UBR2Q8IWV8 1755 aa22.45■■□□□ 1.18
CTSD-214ENST00000637937 A0A087WZG4 1122 aa22.44■■□□□ 1.18
CTSD-214ENST00000637937 C4AP0C0L4 1744 aa22.44■■□□□ 1.18
CTSD-214ENST00000637937 DDR1Q08345 913 aa22.44■■□□□ 1.18
CTSD-214ENST00000637937 A0A0G2JLW4 131 aa22.43■■□□□ 1.18
CTSD-214ENST00000637937 A1BGP04217 495 aa22.43■■□□□ 1.18
CTSD-214ENST00000637937 EIF5P55010 431 aaKnown RBP22.43■■□□□ 1.18
CTSD-214ENST00000637937 ZNF784Q8NCA9 323 aaPredicted RBP22.43■■□□□ 1.18
CTSD-214ENST00000637937 MIS18AQ9NYP9 233 aa22.43■■□□□ 1.18
CTSD-214ENST00000637937 SIPA1L3O60292 1781 aaPredicted RBP22.43■■□□□ 1.18
CTSD-214ENST00000637937 C10orf71Q711Q0 1435 aa22.42■■□□□ 1.18
CTSD-214ENST00000637937 SNRPA1P09661 255 aaKnown RBP22.42■■□□□ 1.18
CTSD-214ENST00000637937 TM4SF1P30408 202 aa22.42■■□□□ 1.18
CTSD-214ENST00000637937 POLRMTO00411 1230 aaKnown RBP22.41■■□□□ 1.18
CTSD-214ENST00000637937 IL6STP40189 918 aaPredicted RBP22.41■■□□□ 1.18
CTSD-214ENST00000637937 USP16Q9Y5T5 823 aa22.41■■□□□ 1.18
CTSD-214ENST00000637937 PRAMEF22A3QJZ6 481 aa22.4■■□□□ 1.18
CTSD-214ENST00000637937 DPEP1P16444 411 aa22.4■■□□□ 1.18
CTSD-214ENST00000637937 NFIXQ14938 502 aa22.4■■□□□ 1.18
CTSD-214ENST00000637937 THUMPD2Q9BTF0 503 aaKnown RBP22.4■■□□□ 1.18
CTSD-214ENST00000637937 TBC1D2BQ9UPU7 963 aa22.4■■□□□ 1.18
CTSD-214ENST00000637937 PXDNLA1KZ92 1463 aa22.4■■□□□ 1.18
CTSD-214ENST00000637937 WDR43Q15061 677 aaKnown RBP eCLIP22.39■■□□□ 1.17
CTSD-214ENST00000637937 PNISRQ8TF01 805 aaKnown RBP22.39■■□□□ 1.17
CTSD-214ENST00000637937 BCL2L12Q9HB09 334 aa22.39■■□□□ 1.17
CTSD-214ENST00000637937 BCS1LQ9Y276 419 aa22.39■■□□□ 1.17
CTSD-214ENST00000637937 RIPK4P57078 832 aa22.38■■□□□ 1.17
CTSD-214ENST00000637937 BICDL1Q6ZP65 573 aa22.38■■□□□ 1.17
CTSD-214ENST00000637937 PRKRIP1Q9H875 184 aaPredicted RBP22.38■■□□□ 1.17
CTSD-214ENST00000637937 PIP4K2AP48426 406 aaPredicted RBP22.37■■□□□ 1.17
CTSD-214ENST00000637937 CHD4Q14839 1912 aa22.37■■□□□ 1.17
CTSD-214ENST00000637937 CCDC146Q8IYE0 955 aa22.36■■□□□ 1.17
CTSD-214ENST00000637937 SERPINB2P05120 415 aa22.35■■□□□ 1.17
CTSD-214ENST00000637937 KCNA3P22001 575 aa22.33■■□□□ 1.17
CTSD-214ENST00000637937 TMPOP42166 694 aaKnown RBP22.33■■□□□ 1.17
CTSD-214ENST00000637937 NEUROD2Q15784 382 aa22.33■■□□□ 1.17
CTSD-214ENST00000637937 TBC1D9BQ66K14 1250 aa22.33■■□□□ 1.17
CTSD-214ENST00000637937 DZIP3Q86Y13 1208 aaKnown RBP22.33■■□□□ 1.17
CTSD-214ENST00000637937 PIM2Q9P1W9 311 aa22.33■■□□□ 1.17
CTSD-214ENST00000637937 RRP7AQ9Y3A4 280 aaKnown RBP22.33■■□□□ 1.17
CTSD-214ENST00000637937 CHRNA5P30532 468 aa22.32■■□□□ 1.16
CTSD-214ENST00000637937 LMOD3Q0VAK6 560 aa22.32■■□□□ 1.16
CTSD-214ENST00000637937 KIF13BQ9NQT8 1826 aa22.31■■□□□ 1.16
CTSD-214ENST00000637937 CAMTA2O94983 1202 aa22.31■■□□□ 1.16
CTSD-214ENST00000637937 EIF4A1P60842 406 aaKnown RBP22.31■■□□□ 1.16
CTSD-214ENST00000637937 RUNDC1Q96C34 613 aa22.31■■□□□ 1.16
CTSD-214ENST00000637937 TSPYL4Q9UJ04 414 aa22.31■■□□□ 1.16
CTSD-214ENST00000637937 ADAMTS8Q9UP79 889 aa22.31■■□□□ 1.16
CTSD-214ENST00000637937 N4BP2Q86UW6 1770 aaPredicted RBP22.3■■□□□ 1.16
CTSD-214ENST00000637937 DALRD3Q5D0E6 543 aaKnown RBP22.3■■□□□ 1.16
CTSD-214ENST00000637937 NBPF26B4DH59 902 aa22.29■■□□□ 1.16
CTSD-214ENST00000637937 GIGYF1O75420 1035 aaPredicted RBP22.29■■□□□ 1.16
CTSD-214ENST00000637937 NBPF10Q6P3W6 841 aaKnown RBP22.29■■□□□ 1.16
CTSD-214ENST00000637937 ARHGAP27Q6ZUM4 889 aa22.29■■□□□ 1.16
CTSD-214ENST00000637937 NBPF15Q8N660 670 aa22.29■■□□□ 1.16
CTSD-214ENST00000637937 SETDB2Q96T68 719 aa22.29■■□□□ 1.16
CTSD-214ENST00000637937 DLG5Q8TDM6 1919 aa22.29■■□□□ 1.16
CTSD-214ENST00000637937 NPHP1O15259 732 aa22.28■■□□□ 1.16
CTSD-214ENST00000637937 KIAA1551Q9HCM1 1747 aa22.27■■□□□ 1.16
CTSD-214ENST00000637937 ZNF652Q9Y2D9 606 aa22.27■■□□□ 1.16
CTSD-214ENST00000637937 CARMIL3Q8ND23 1372 aa22.26■■□□□ 1.15
CTSD-214ENST00000637937 NGEFQ8N5V2 710 aa22.26■■□□□ 1.15
CTSD-214ENST00000637937 ZNF316A6NFI3 1004 aaPredicted RBP22.25■■□□□ 1.15
CTSD-214ENST00000637937 C2CD5Q86YS7 1000 aa22.25■■□□□ 1.15
CTSD-214ENST00000637937 CCDC24Q8N4L8 307 aa22.25■■□□□ 1.15
CTSD-214ENST00000637937 H0YIN7 160 aa22.24■■□□□ 1.15
CTSD-214ENST00000637937 PRR5LQ6MZQ0 368 aa22.24■■□□□ 1.15
CTSD-214ENST00000637937 CLEC4GQ6UXB4 293 aa22.24■■□□□ 1.15
CTSD-214ENST00000637937 ATP10DQ9P241 1426 aa22.23■■□□□ 1.15
CTSD-214ENST00000637937 CNBD1Q8NA66 436 aa22.23■■□□□ 1.15
CTSD-214ENST00000637937 BABAM1Q9NWV8 329 aa22.23■■□□□ 1.15
CTSD-214ENST00000637937 LAS1LQ9Y4W2 734 aaKnown RBP22.23■■□□□ 1.15
CTSD-214ENST00000637937 MYL6BP14649 208 aa22.22■■□□□ 1.15
CTSD-214ENST00000637937 ZNF526Q8TF50 670 aaPredicted RBP22.22■■□□□ 1.15
CTSD-214ENST00000637937 BRIP1Q9BX63 1249 aa22.22■■□□□ 1.15
CTSD-214ENST00000637937 SCN7AQ01118 1682 aa22.22■■□□□ 1.15
CTSD-214ENST00000637937 KDM3BQ7LBC6 1761 aa22.21■■□□□ 1.15
CTSD-214ENST00000637937 EIF2S2P20042 333 aaKnown RBP22.21■■□□□ 1.15
CTSD-214ENST00000637937 PDE6BP35913 854 aa22.21■■□□□ 1.15
CTSD-214ENST00000637937 ST5P78524 1137 aa22.21■■□□□ 1.15
CTSD-214ENST00000637937 TRIM35Q9UPQ4 493 aa22.21■■□□□ 1.15
CTSD-214ENST00000637937 AFDNP55196 1824 aaKnown RBP22.2■■□□□ 1.14
CTSD-214ENST00000637937 NBPF5PQ86XG9 351 aaPredicted RBP22.2■■□□□ 1.14
CTSD-214ENST00000637937 TTLL6Q8N841 843 aa22.2■■□□□ 1.14
CTSD-214ENST00000637937 GPBP1L1Q9HC44 474 aaPredicted RBP22.2■■□□□ 1.14
CTSD-214ENST00000637937 NIP7Q9Y221 180 aaKnown RBP eCLIP22.2■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms