RNA–Protein interactions for RNA: ENST00000635747.1

CLN6-210, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 1,181 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-210ENST00000635747 TGFB2P61812 414 aa24.2■■□□□ 1.46
CLN6-210ENST00000635747 UBR2Q8IWV8 1755 aa24.2■■□□□ 1.46
CLN6-210ENST00000635747 FKBP8Q14318 412 aa24.19■■□□□ 1.46
CLN6-210ENST00000635747 NARFQ9UHQ1 456 aa24.19■■□□□ 1.46
CLN6-210ENST00000635747 COL15A1P39059 1388 aa24.18■■□□□ 1.46
CLN6-210ENST00000635747 A0A087WZG4 1122 aa24.18■■□□□ 1.46
CLN6-210ENST00000635747 YBX3P16989 372 aaKnown RBP eCLIP24.18■■□□□ 1.461e-7■■□□□ 13.8
CLN6-210ENST00000635747 CANXP27824 592 aaKnown RBP24.18■■□□□ 1.46
CLN6-210ENST00000635747 TAF7Q15545 349 aaPredicted RBP24.18■■□□□ 1.46
CLN6-210ENST00000635747 NFE2L2Q16236 605 aa24.18■■□□□ 1.46
CLN6-210ENST00000635747 SIPA1L3O60292 1781 aaPredicted RBP24.18■■□□□ 1.46
CLN6-210ENST00000635747 EIF5P55010 431 aaKnown RBP24.17■■□□□ 1.46
CLN6-210ENST00000635747 DCTN1Q14203 1278 aa24.17■■□□□ 1.46
CLN6-210ENST00000635747 USPL1Q5W0Q7 1092 aa24.17■■□□□ 1.46
CLN6-210ENST00000635747 NPM2Q86SE8 214 aaKnown RBP24.17■■□□□ 1.46
CLN6-210ENST00000635747 C4AP0C0L4 1744 aa24.16■■□□□ 1.46
CLN6-210ENST00000635747 KCNQ3O43525 872 aa24.15■■□□□ 1.46
CLN6-210ENST00000635747 TM4SF1P30408 202 aa24.15■■□□□ 1.46
CLN6-210ENST00000635747 PNISRQ8TF01 805 aaKnown RBP24.15■■□□□ 1.46
CLN6-210ENST00000635747 CHD4Q14839 1912 aa24.14■■□□□ 1.46
CLN6-210ENST00000635747 SNRPA1P09661 255 aaKnown RBP24.14■■□□□ 1.45
CLN6-210ENST00000635747 IL6STP40189 918 aaPredicted RBP24.14■■□□□ 1.45
CLN6-210ENST00000635747 C10orf71Q711Q0 1435 aa24.14■■□□□ 1.45
CLN6-210ENST00000635747 POLRMTO00411 1230 aaKnown RBP24.11■■□□□ 1.45
CLN6-210ENST00000635747 DDR1Q08345 913 aa24.11■■□□□ 1.45
CLN6-210ENST00000635747 A1BGP04217 495 aa24.1■■□□□ 1.45
CLN6-210ENST00000635747 ZNF784Q8NCA9 323 aaPredicted RBP24.1■■□□□ 1.45
CLN6-210ENST00000635747 PRKRIP1Q9H875 184 aaPredicted RBP24.1■■□□□ 1.45
CLN6-210ENST00000635747 PXDNLA1KZ92 1463 aa24.09■■□□□ 1.45
CLN6-210ENST00000635747 WDR43Q15061 677 aaKnown RBP eCLIP24.09■■□□□ 1.45
CLN6-210ENST00000635747 USP16Q9Y5T5 823 aa24.09■■□□□ 1.45
CLN6-210ENST00000635747 KIF13BQ9NQT8 1826 aa24.08■■□□□ 1.45
CLN6-210ENST00000635747 A0A0G2JLW4 131 aa24.08■■□□□ 1.45
CLN6-210ENST00000635747 LMOD3Q0VAK6 560 aa24.08■■□□□ 1.45
CLN6-210ENST00000635747 NFIXQ14938 502 aa24.08■■□□□ 1.45
CLN6-210ENST00000635747 BCL2L12Q9HB09 334 aa24.08■■□□□ 1.45
CLN6-210ENST00000635747 ZNF330Q9Y3S2 320 aaPredicted RBP24.08■■□□□ 1.45
CLN6-210ENST00000635747 DPEP1P16444 411 aa24.07■■□□□ 1.44
CLN6-210ENST00000635747 RIPK4P57078 832 aa24.07■■□□□ 1.44
CLN6-210ENST00000635747 MIS18AQ9NYP9 233 aa24.06■■□□□ 1.44
CLN6-210ENST00000635747 TBC1D2BQ9UPU7 963 aa24.05■■□□□ 1.44
CLN6-210ENST00000635747 SERPINB2P05120 415 aa24.04■■□□□ 1.44
CLN6-210ENST00000635747 TMPOP42166 694 aaKnown RBP24.04■■□□□ 1.44
CLN6-210ENST00000635747 PIM2Q9P1W9 311 aa24.04■■□□□ 1.44
CLN6-210ENST00000635747 WWC3Q9ULE0 1092 aa24.04■■□□□ 1.44
CLN6-210ENST00000635747 BCS1LQ9Y276 419 aa24.04■■□□□ 1.44
CLN6-210ENST00000635747 PRAMEF22A3QJZ6 481 aa24.03■■□□□ 1.44
CLN6-210ENST00000635747 BABAM1Q9NWV8 329 aa24.03■■□□□ 1.44
CLN6-210ENST00000635747 KCNA3P22001 575 aa24.02■■□□□ 1.44
CLN6-210ENST00000635747 DZIP3Q86Y13 1208 aaKnown RBP24.02■■□□□ 1.44
CLN6-210ENST00000635747 RUNDC1Q96C34 613 aa24.02■■□□□ 1.44
CLN6-210ENST00000635747 THUMPD2Q9BTF0 503 aaKnown RBP24.02■■□□□ 1.44
CLN6-210ENST00000635747 DLG5Q8TDM6 1919 aa24.02■■□□□ 1.44
CLN6-210ENST00000635747 EIF4A1P60842 406 aaKnown RBP24.01■■□□□ 1.43
CLN6-210ENST00000635747 BICDL1Q6ZP65 573 aa24.01■■□□□ 1.43
CLN6-210ENST00000635747 GIGYF1O75420 1035 aaPredicted RBP24■■□□□ 1.43
CLN6-210ENST00000635747 CAMTA2O94983 1202 aa24■■□□□ 1.43
CLN6-210ENST00000635747 TBC1D9BQ66K14 1250 aa24■■□□□ 1.43
CLN6-210ENST00000635747 CLEC4GQ6UXB4 293 aa24■■□□□ 1.43
CLN6-210ENST00000635747 ADAMTS8Q9UP79 889 aa24■■□□□ 1.43
CLN6-210ENST00000635747 RGL2O15211 777 aa23.99■■□□□ 1.43
CLN6-210ENST00000635747 DALRD3Q5D0E6 543 aaKnown RBP23.99■■□□□ 1.43
CLN6-210ENST00000635747 SETDB2Q96T68 719 aa23.99■■□□□ 1.43
CLN6-210ENST00000635747 TSPYL4Q9UJ04 414 aa23.99■■□□□ 1.43
CLN6-210ENST00000635747 ZNF652Q9Y2D9 606 aa23.99■■□□□ 1.43
CLN6-210ENST00000635747 CCDC146Q8IYE0 955 aa23.98■■□□□ 1.43
CLN6-210ENST00000635747 PDZRN3Q9UPQ7 1066 aa23.98■■□□□ 1.43
CLN6-210ENST00000635747 CARMIL3Q8ND23 1372 aa23.98■■□□□ 1.43
CLN6-210ENST00000635747 KIAA1551Q9HCM1 1747 aa23.98■■□□□ 1.43
CLN6-210ENST00000635747 N4BP2Q86UW6 1770 aaPredicted RBP23.98■■□□□ 1.43
CLN6-210ENST00000635747 PIP4K2AP48426 406 aaPredicted RBP23.97■■□□□ 1.43
CLN6-210ENST00000635747 NBPF26B4DH59 902 aa23.96■■□□□ 1.43
CLN6-210ENST00000635747 NEUROD2Q15784 382 aa23.96■■□□□ 1.43
CLN6-210ENST00000635747 NBPF10Q6P3W6 841 aaKnown RBP23.96■■□□□ 1.43
CLN6-210ENST00000635747 NBPF15Q8N660 670 aa23.96■■□□□ 1.43
CLN6-210ENST00000635747 ZNF316A6NFI3 1004 aaPredicted RBP23.95■■□□□ 1.42
CLN6-210ENST00000635747 CHRNA5P30532 468 aa23.95■■□□□ 1.42
CLN6-210ENST00000635747 ARHGAP27Q6ZUM4 889 aa23.95■■□□□ 1.42
CLN6-210ENST00000635747 NRXN2Q9P2S2 1712 aa23.94■■□□□ 1.42
CLN6-210ENST00000635747 H0YIN7 160 aa23.94■■□□□ 1.42
CLN6-210ENST00000635747 NPHP1O15259 732 aa23.94■■□□□ 1.42
CLN6-210ENST00000635747 BRIP1Q9BX63 1249 aa23.94■■□□□ 1.42
CLN6-210ENST00000635747 RRP7AQ9Y3A4 280 aaKnown RBP23.94■■□□□ 1.42
CLN6-210ENST00000635747 SCN7AQ01118 1682 aa23.94■■□□□ 1.42
CLN6-210ENST00000635747 KDM3BQ7LBC6 1761 aa23.93■■□□□ 1.42
CLN6-210ENST00000635747 PDE6BP35913 854 aa23.93■■□□□ 1.42
CLN6-210ENST00000635747 ERBB4Q15303 1308 aa23.92■■□□□ 1.42
CLN6-210ENST00000635747 CNBD1Q8NA66 436 aa23.92■■□□□ 1.42
CLN6-210ENST00000635747 AFDNP55196 1824 aaKnown RBP23.91■■□□□ 1.42
CLN6-210ENST00000635747 ST5P78524 1137 aa23.91■■□□□ 1.42
CLN6-210ENST00000635747 PRR5LQ6MZQ0 368 aa23.91■■□□□ 1.42
CLN6-210ENST00000635747 C2CD5Q86YS7 1000 aa23.91■■□□□ 1.42
CLN6-210ENST00000635747 TTLL6Q8N841 843 aa23.9■■□□□ 1.42
CLN6-210ENST00000635747 TRIM35Q9UPQ4 493 aa23.9■■□□□ 1.42
CLN6-210ENST00000635747 ADCY9O60503 1353 aa23.9■■□□□ 1.42
CLN6-210ENST00000635747 ERVV-1B6SEH8 477 aa23.89■■□□□ 1.41
CLN6-210ENST00000635747 ATP10DQ9P241 1426 aa23.89■■□□□ 1.41
CLN6-210ENST00000635747 BRCA1P38398 1863 aaKnown RBP23.89■■□□□ 1.41
CLN6-210ENST00000635747 CHL1O00533 1208 aa23.88■■□□□ 1.41
CLN6-210ENST00000635747 KIF6Q6ZMV9 814 aa23.88■■□□□ 1.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms