RNA–Protein interactions for RNA: ENST00000634889.1

CDC42BPB-209, Transcript of CDC42 binding protein kinase beta, humanhuman

TSL 3

Gene CDC42BPB, Length 507 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPB-209ENST00000634889 AMIGO3Q86WK7 504 aa19.3■□□□□ 0.68
CDC42BPB-209ENST00000634889 TSPYL4Q9UJ04 414 aa19.3■□□□□ 0.68
CDC42BPB-209ENST00000634889 PHF14O94880 888 aa19.29■□□□□ 0.68
CDC42BPB-209ENST00000634889 ZBTB7AO95365 584 aa19.29■□□□□ 0.68
CDC42BPB-209ENST00000634889 C4AP0C0L4 1744 aa19.28■□□□□ 0.68
CDC42BPB-209ENST00000634889 MSH5O43196 834 aa19.28■□□□□ 0.68
CDC42BPB-209ENST00000634889 EIF4A1P60842 406 aaKnown RBP19.28■□□□□ 0.68
CDC42BPB-209ENST00000634889 NGEFQ8N5V2 710 aa19.28■□□□□ 0.68
CDC42BPB-209ENST00000634889 CHL1O00533 1208 aa19.27■□□□□ 0.68
CDC42BPB-209ENST00000634889 TRAPPC3LQ5T215 181 aa19.27■□□□□ 0.68
CDC42BPB-209ENST00000634889 CFAP44Q96MT7 982 aa19.27■□□□□ 0.68
CDC42BPB-209ENST00000634889 SOS1Q07889 1333 aaPredicted RBP19.25■□□□□ 0.67
CDC42BPB-209ENST00000634889 GIGYF1O75420 1035 aaPredicted RBP19.25■□□□□ 0.67
CDC42BPB-209ENST00000634889 MIER1Q8N108 512 aa19.25■□□□□ 0.67
CDC42BPB-209ENST00000634889 IFT57Q9NWB7 429 aa19.25■□□□□ 0.67
CDC42BPB-209ENST00000634889 ZBTB1Q9Y2K1 713 aa19.25■□□□□ 0.67
CDC42BPB-209ENST00000634889 PTGER2P43116 358 aa19.24■□□□□ 0.67
CDC42BPB-209ENST00000634889 SMIM5Q71RC9 77 aa19.24■□□□□ 0.67
CDC42BPB-209ENST00000634889 WWC1Q8IX03 1113 aa19.24■□□□□ 0.67
CDC42BPB-209ENST00000634889 ARHGEF1Q92888 912 aaKnown RBP19.24■□□□□ 0.67
CDC42BPB-209ENST00000634889 SGIP1Q9BQI5 828 aa19.24■□□□□ 0.67
CDC42BPB-209ENST00000634889 ATF5Q9Y2D1 282 aaPredicted RBP19.24■□□□□ 0.67
CDC42BPB-209ENST00000634889 USP16Q9Y5T5 823 aa19.24■□□□□ 0.67
CDC42BPB-209ENST00000634889 COL15A1P39059 1388 aa19.23■□□□□ 0.67
CDC42BPB-209ENST00000634889 PRAMEF22A3QJZ6 481 aa19.23■□□□□ 0.67
CDC42BPB-209ENST00000634889 ZNF853P0CG23 659 aa19.23■□□□□ 0.67
CDC42BPB-209ENST00000634889 RFC4P35249 363 aa19.23■□□□□ 0.67
CDC42BPB-209ENST00000634889 GNAI1P63096 354 aa19.23■□□□□ 0.67
CDC42BPB-209ENST00000634889 LAS1LQ9Y4W2 734 aaKnown RBP19.23■□□□□ 0.67
CDC42BPB-209ENST00000634889 CANXP27824 592 aaKnown RBP19.21■□□□□ 0.67
CDC42BPB-209ENST00000634889 POLD1P28340 1107 aa19.21■□□□□ 0.67
CDC42BPB-209ENST00000634889 IL6STP40189 918 aaPredicted RBP19.21■□□□□ 0.67
CDC42BPB-209ENST00000634889 EIF5P55010 431 aaKnown RBP19.21■□□□□ 0.67
CDC42BPB-209ENST00000634889 MBIPQ9NS73 344 aa19.21■□□□□ 0.67
CDC42BPB-209ENST00000634889 IL16Q14005 1332 aa19.21■□□□□ 0.67
CDC42BPB-209ENST00000634889 USP42Q9H9J4 1324 aaKnown RBP19.21■□□□□ 0.67
CDC42BPB-209ENST00000634889 A1BGP04217 495 aa19.2■□□□□ 0.66
CDC42BPB-209ENST00000634889 A0A087WZG4 1122 aa19.19■□□□□ 0.66
CDC42BPB-209ENST00000634889 WDR63Q8IWG1 891 aa19.19■□□□□ 0.66
CDC42BPB-209ENST00000634889 PPP1R1BQ9UD71 204 aaPredicted RBP19.19■□□□□ 0.66
CDC42BPB-209ENST00000634889 SCN7AQ01118 1682 aa19.18■□□□□ 0.66
CDC42BPB-209ENST00000634889 SENP3-EIF4A1A0A087X0R7 540 aa19.18■□□□□ 0.66
CDC42BPB-209ENST00000634889 HOXB7P09629 217 aa19.18■□□□□ 0.66
CDC42BPB-209ENST00000634889 GYS1P13807 737 aa19.18■□□□□ 0.66
CDC42BPB-209ENST00000634889 MSL1Q68DK7 614 aa19.18■□□□□ 0.66
CDC42BPB-209ENST00000634889 NPM2Q86SE8 214 aaKnown RBP19.18■□□□□ 0.66
CDC42BPB-209ENST00000634889 NLGN1Q8N2Q7 840 aa19.18■□□□□ 0.66
CDC42BPB-209ENST00000634889 ERBB4Q15303 1308 aa19.18■□□□□ 0.66
CDC42BPB-209ENST00000634889 ZPR1O75312 459 aa19.17■□□□□ 0.66
CDC42BPB-209ENST00000634889 NARFQ9UHQ1 456 aa19.17■□□□□ 0.66
CDC42BPB-209ENST00000634889 ARXQ96QS3 562 aa19.16■□□□□ 0.66
CDC42BPB-209ENST00000634889 BCORQ6W2J9 1755 aa19.16■□□□□ 0.66
CDC42BPB-209ENST00000634889 NBPF26B4DH59 902 aa19.15■□□□□ 0.66
CDC42BPB-209ENST00000634889 NBPF10Q6P3W6 841 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-209ENST00000634889 NBPF15Q8N660 670 aa19.15■□□□□ 0.66
CDC42BPB-209ENST00000634889 SRP68Q9UHB9 627 aaKnown RBP19.15■□□□□ 0.66
CDC42BPB-209ENST00000634889 ZNF330Q9Y3S2 320 aaPredicted RBP19.15■□□□□ 0.66
CDC42BPB-209ENST00000634889 SALL2Q9Y467 1007 aaPredicted RBP19.15■□□□□ 0.66
CDC42BPB-209ENST00000634889 KRT24Q2M2I5 525 aa19.14■□□□□ 0.65
CDC42BPB-209ENST00000634889 USPL1Q5W0Q7 1092 aa19.14■□□□□ 0.65
CDC42BPB-209ENST00000634889 PIP4K2AP48426 406 aaPredicted RBP19.13■□□□□ 0.65
CDC42BPB-209ENST00000634889 ZNF521Q96K83 1311 aa19.13■□□□□ 0.65
CDC42BPB-209ENST00000634889 RGL2O15211 777 aa19.12■□□□□ 0.65
CDC42BPB-209ENST00000634889 DUSP27Q5VZP5 1158 aa19.12■□□□□ 0.65
CDC42BPB-209ENST00000634889 DZIP3Q86Y13 1208 aaKnown RBP19.12■□□□□ 0.65
CDC42BPB-209ENST00000634889 MMP10P09238 476 aa19.11■□□□□ 0.65
CDC42BPB-209ENST00000634889 EIF2S2P20042 333 aaKnown RBP19.11■□□□□ 0.65
CDC42BPB-209ENST00000634889 FKBP8Q14318 412 aa19.11■□□□□ 0.65
CDC42BPB-209ENST00000634889 TSR2Q969E8 191 aaKnown RBP19.11■□□□□ 0.65
CDC42BPB-209ENST00000634889 CHMP4AQ9BY43 222 aa19.11■□□□□ 0.65
CDC42BPB-209ENST00000634889 TBC1D2BQ9UPU7 963 aa19.11■□□□□ 0.65
CDC42BPB-209ENST00000634889 FANCIQ9NVI1 1328 aa19.1■□□□□ 0.65
CDC42BPB-209ENST00000634889 HDGFL1Q5TGJ6 251 aa19.1■□□□□ 0.65
CDC42BPB-209ENST00000634889 BCL2L12Q9HB09 334 aa19.1■□□□□ 0.65
CDC42BPB-209ENST00000634889 CAMTA2O94983 1202 aa19.09■□□□□ 0.65
CDC42BPB-209ENST00000634889 MYL6BP14649 208 aa19.09■□□□□ 0.65
CDC42BPB-209ENST00000634889 PDIA6Q15084 440 aa19.09■□□□□ 0.65
CDC42BPB-209ENST00000634889 FHDC1Q9C0D6 1143 aaPredicted RBP19.09■□□□□ 0.65
CDC42BPB-209ENST00000634889 MYH16Q9H6N6 1097 aa19.09■□□□□ 0.65
CDC42BPB-209ENST00000634889 TM4SF1P30408 202 aa19.08■□□□□ 0.64
CDC42BPB-209ENST00000634889 CLEC4GQ6UXB4 293 aa19.08■□□□□ 0.64
CDC42BPB-209ENST00000634889 LRP10Q7Z4F1 713 aa19.08■□□□□ 0.64
CDC42BPB-209ENST00000634889 C8orf58Q8NAV2 365 aa19.08■□□□□ 0.64
CDC42BPB-209ENST00000634889 DDX21Q9NR30 783 aaKnown RBP eCLIP19.08■□□□□ 0.64
CDC42BPB-209ENST00000634889 PARP3Q9Y6F1 533 aa19.08■□□□□ 0.64
CDC42BPB-209ENST00000634889 GOLGA2Q08379 1002 aa19.07■□□□□ 0.64
CDC42BPB-209ENST00000634889 DBF4Q9UBU7 674 aaPredicted RBP19.07■□□□□ 0.64
CDC42BPB-209ENST00000634889 ZNF652Q9Y2D9 606 aa19.07■□□□□ 0.64
CDC42BPB-209ENST00000634889 KIF13BQ9NQT8 1826 aa19.07■□□□□ 0.64
CDC42BPB-209ENST00000634889 NRXN2Q9P2S2 1712 aa19.06■□□□□ 0.64
CDC42BPB-209ENST00000634889 ERVV-1B6SEH8 477 aa19.06■□□□□ 0.64
CDC42BPB-209ENST00000634889 NFIXQ14938 502 aa19.06■□□□□ 0.64
CDC42BPB-209ENST00000634889 KIF6Q6ZMV9 814 aa19.06■□□□□ 0.64
CDC42BPB-209ENST00000634889 NECTIN2Q92692 538 aa19.06■□□□□ 0.64
CDC42BPB-209ENST00000634889 SYT17Q9BSW7 474 aa19.06■□□□□ 0.64
CDC42BPB-209ENST00000634889 CHPF2Q9P2E5 772 aa19.06■□□□□ 0.64
CDC42BPB-209ENST00000634889 CD2APQ9Y5K6 639 aa19.06■□□□□ 0.64
CDC42BPB-209ENST00000634889 MAP3K15Q6ZN16 1313 aa19.05■□□□□ 0.64
CDC42BPB-209ENST00000634889 POLRMTO00411 1230 aaKnown RBP19.05■□□□□ 0.64
CDC42BPB-209ENST00000634889 ELL2O00472 640 aaPredicted RBP19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 164.4 ms