RNA–Protein interactions for RNA: ENST00000633835.1

BNIP3-204, Transcript of BCL2 interacting protein 3, humanhuman

TSL 3

Gene BNIP3, Length 1,062 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BNIP3-204ENST00000633835 U2AF1Q01081 240 aaKnown RBP eCLIP28.28■■■□□ 2.12
BNIP3-204ENST00000633835 USPL1Q5W0Q7 1092 aa28.28■■■□□ 2.12
BNIP3-204ENST00000633835 ZNF496Q96IT1 587 aaPredicted RBP28.28■■■□□ 2.12
BNIP3-204ENST00000633835 DPEP1P16444 411 aa28.27■■■□□ 2.12
BNIP3-204ENST00000633835 ZNF790Q6PG37 636 aa28.27■■■□□ 2.12
BNIP3-204ENST00000633835 TTC5Q8N0Z6 440 aa28.27■■■□□ 2.12
BNIP3-204ENST00000633835 ADCY9O60503 1353 aa28.26■■■□□ 2.12
BNIP3-204ENST00000633835 TM4SF1P30408 202 aa28.26■■■□□ 2.11
BNIP3-204ENST00000633835 ATP10DQ9P241 1426 aa28.26■■■□□ 2.11
BNIP3-204ENST00000633835 HEG1Q9ULI3 1381 aa28.25■■■□□ 2.11
BNIP3-204ENST00000633835 POLRMTO00411 1230 aaKnown RBP28.24■■■□□ 2.11
BNIP3-204ENST00000633835 KCNQ3O43525 872 aa28.24■■■□□ 2.11
BNIP3-204ENST00000633835 ZPR1O75312 459 aa28.24■■■□□ 2.11
BNIP3-204ENST00000633835 NARFQ9UHQ1 456 aa28.24■■■□□ 2.11
BNIP3-204ENST00000633835 KCNA3P22001 575 aa28.23■■■□□ 2.11
BNIP3-204ENST00000633835 CANXP27824 592 aaKnown RBP28.23■■■□□ 2.11
BNIP3-204ENST00000633835 BCL2L12Q9HB09 334 aa28.23■■■□□ 2.11
BNIP3-204ENST00000633835 SCN7AQ01118 1682 aa28.23■■■□□ 2.11
BNIP3-204ENST00000633835 FCHSD2O94868 740 aa28.22■■■□□ 2.11
BNIP3-204ENST00000633835 BCS1LQ9Y276 419 aa28.22■■■□□ 2.11
BNIP3-204ENST00000633835 SBF1O95248 1867 aa28.21■■■□□ 2.11
BNIP3-204ENST00000633835 DLEC1Q9Y238 1755 aa28.21■■■□□ 2.11
BNIP3-204ENST00000633835 EIF5P55010 431 aaKnown RBP28.2■■■□□ 2.1
BNIP3-204ENST00000633835 C1QTNF8P60827 252 aa28.2■■■□□ 2.1
BNIP3-204ENST00000633835 ANKRD31Q8N7Z5 1873 aa28.19■■■□□ 2.1
BNIP3-204ENST00000633835 STARD3NLO95772 234 aa28.19■■■□□ 2.1
BNIP3-204ENST00000633835 NFIXQ14938 502 aa28.19■■■□□ 2.1
BNIP3-204ENST00000633835 MCM10Q7L590 875 aa28.19■■■□□ 2.1
BNIP3-204ENST00000633835 BTBD11A6QL63 1104 aa28.18■■■□□ 2.1
BNIP3-204ENST00000633835 GIGYF1O75420 1035 aaPredicted RBP28.18■■■□□ 2.1
BNIP3-204ENST00000633835 FMNL2Q96PY5 1086 aa28.18■■■□□ 2.1
BNIP3-204ENST00000633835 BCORQ6W2J9 1755 aa28.18■■■□□ 2.1
BNIP3-204ENST00000633835 DCTN1Q14203 1278 aa28.17■■■□□ 2.1
BNIP3-204ENST00000633835 CCDC88AQ3V6T2 1871 aa28.16■■■□□ 2.1
BNIP3-204ENST00000633835 CHRNA5P30532 468 aa28.15■■■□□ 2.1
BNIP3-204ENST00000633835 TEX13AQ9BXU3 409 aaPredicted RBP28.15■■■□□ 2.1
BNIP3-204ENST00000633835 KDM3BQ7LBC6 1761 aa28.14■■■□□ 2.1
BNIP3-204ENST00000633835 A1BGP04217 495 aa28.14■■■□□ 2.1
BNIP3-204ENST00000633835 RTF1Q92541 710 aaKnown RBP28.13■■■□□ 2.09
BNIP3-204ENST00000633835 PRAMEF22A3QJZ6 481 aa28.12■■■□□ 2.09
BNIP3-204ENST00000633835 ZNF526Q8TF50 670 aaPredicted RBP28.12■■■□□ 2.09
BNIP3-204ENST00000633835 PIM2Q9P1W9 311 aa28.12■■■□□ 2.09
BNIP3-204ENST00000633835 LAMB4A4D0S4 1761 aa28.11■■■□□ 2.09
BNIP3-204ENST00000633835 SERPINB2P05120 415 aa28.11■■■□□ 2.09
BNIP3-204ENST00000633835 ARHGAP27Q6ZUM4 889 aa28.11■■■□□ 2.09
BNIP3-204ENST00000633835 USP16Q9Y5T5 823 aa28.11■■■□□ 2.09
BNIP3-204ENST00000633835 IL6STP40189 918 aaPredicted RBP28.1■■■□□ 2.09
BNIP3-204ENST00000633835 GPBP1L1Q9HC44 474 aaPredicted RBP28.1■■■□□ 2.09
BNIP3-204ENST00000633835 TBC1D2BQ9UPU7 963 aa28.1■■■□□ 2.09
BNIP3-204ENST00000633835 ZNF330Q9Y3S2 320 aaPredicted RBP28.1■■■□□ 2.09
BNIP3-204ENST00000633835 CARMIL3Q8ND23 1372 aa28.1■■■□□ 2.09
BNIP3-204ENST00000633835 CACNA1SQ13698 1873 aa28.09■■■□□ 2.09
BNIP3-204ENST00000633835 A0A087WZG4 1122 aa28.09■■■□□ 2.09
BNIP3-204ENST00000633835 HTATSF1O43719 755 aaKnown RBP28.09■■■□□ 2.09
BNIP3-204ENST00000633835 PLEKHF1Q96S99 279 aa28.09■■■□□ 2.09
BNIP3-204ENST00000633835 CEP350Q5VT06 3117 aa28.08■■■□□ 2.09
BNIP3-204ENST00000633835 TBC1D9BQ66K14 1250 aa28.08■■■□□ 2.09
BNIP3-204ENST00000633835 BICDL1Q6ZP65 573 aa28.08■■■□□ 2.09
BNIP3-204ENST00000633835 COL11A2P13942 1736 aaPredicted RBP28.08■■■□□ 2.09
BNIP3-204ENST00000633835 PIP4K2AP48426 406 aaPredicted RBP28.07■■■□□ 2.08
BNIP3-204ENST00000633835 DALRD3Q5D0E6 543 aaKnown RBP28.07■■■□□ 2.08
BNIP3-204ENST00000633835 SENP3-EIF4A1A0A087X0R7 540 aa28.06■■■□□ 2.08
BNIP3-204ENST00000633835 CAMTA2O94983 1202 aa28.04■■■□□ 2.08
BNIP3-204ENST00000633835 MIS18AQ9NYP9 233 aa28.04■■■□□ 2.08
BNIP3-204ENST00000633835 SNRPA1P09661 255 aaKnown RBP28.03■■■□□ 2.08
BNIP3-204ENST00000633835 TAF7Q15545 349 aaPredicted RBP28.03■■■□□ 2.08
BNIP3-204ENST00000633835 DDX10Q13206 875 aaKnown RBP28.02■■■□□ 2.08
BNIP3-204ENST00000633835 NUP98P52948 1817 aa28.02■■■□□ 2.08
BNIP3-204ENST00000633835 NFE2L2Q16236 605 aa28■■■□□ 2.07
BNIP3-204ENST00000633835 DZIP3Q86Y13 1208 aaKnown RBP28■■■□□ 2.07
BNIP3-204ENST00000633835 THUMPD2Q9BTF0 503 aaKnown RBP28■■■□□ 2.07
BNIP3-204ENST00000633835 NBPF26B4DH59 902 aa27.99■■■□□ 2.07
BNIP3-204ENST00000633835 NEFMP07197 916 aa27.99■■■□□ 2.07
BNIP3-204ENST00000633835 RALBP1Q15311 655 aa27.99■■■□□ 2.07
BNIP3-204ENST00000633835 NBPF10Q6P3W6 841 aaKnown RBP27.99■■■□□ 2.07
BNIP3-204ENST00000633835 CCDC24Q8N4L8 307 aa27.99■■■□□ 2.07
BNIP3-204ENST00000633835 NBPF15Q8N660 670 aa27.99■■■□□ 2.07
BNIP3-204ENST00000633835 KIF3CO14782 793 aa27.98■■■□□ 2.07
BNIP3-204ENST00000633835 C9orf131Q5VYM1 1079 aa27.98■■■□□ 2.07
BNIP3-204ENST00000633835 PRR5LQ6MZQ0 368 aa27.98■■■□□ 2.07
BNIP3-204ENST00000633835 C2CD5Q86YS7 1000 aa27.98■■■□□ 2.07
BNIP3-204ENST00000633835 FER1L6Q2WGJ9 1857 aa27.98■■■□□ 2.07
BNIP3-204ENST00000633835 SLX4Q8IY92 1834 aa27.97■■■□□ 2.07
BNIP3-204ENST00000633835 ARFGEF2Q9Y6D5 1785 aa27.97■■■□□ 2.07
BNIP3-204ENST00000633835 DICER1Q9UPY3 1922 aaKnown RBP27.96■■■□□ 2.07
BNIP3-204ENST00000633835 NPM2Q86SE8 214 aaKnown RBP27.96■■■□□ 2.07
BNIP3-204ENST00000633835 H0YIN7 160 aa27.94■■■□□ 2.06
BNIP3-204ENST00000633835 SETDB2Q96T68 719 aa27.94■■■□□ 2.06
BNIP3-204ENST00000633835 MAPK8IP3Q9UPT6 1336 aa27.93■■■□□ 2.06
BNIP3-204ENST00000633835 RASSF7Q02833 373 aa27.93■■■□□ 2.06
BNIP3-204ENST00000633835 TTLL6Q8N841 843 aa27.93■■■□□ 2.06
BNIP3-204ENST00000633835 TIAM2Q8IVF5 1701 aa27.92■■■□□ 2.06
BNIP3-204ENST00000633835 BRIP1Q9BX63 1249 aa27.92■■■□□ 2.06
BNIP3-204ENST00000633835 PNNQ9H307 717 aaKnown RBP27.92■■■□□ 2.06
BNIP3-204ENST00000633835 RNF181Q9P0P0 153 aa27.92■■■□□ 2.06
BNIP3-204ENST00000633835 PRELPP51888 382 aa27.91■■■□□ 2.06
BNIP3-204ENST00000633835 EIF4A1P60842 406 aaKnown RBP27.91■■■□□ 2.06
BNIP3-204ENST00000633835 PNISRQ8TF01 805 aaKnown RBP27.91■■■□□ 2.06
BNIP3-204ENST00000633835 NMRK2Q9NPI5 230 aa27.9■■■□□ 2.06
BNIP3-204ENST00000633835 MYBBP1AQ9BQG0 1328 aaKnown RBP27.9■■■□□ 2.06
Retrieved 100 of 20,778 RNA–protein pairs in 168.5 ms