RNA–Protein interactions for RNA: ENST00000628904.2

PKP4-217, Transcript of plakophilin 4, humanhuman

TSL 5 BASIC

Gene PKP4, Length 3,856 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-217ENST00000628904 ABCC4O15439 1325 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 MCM4P33991 863 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 FAM182BQ5T319 152 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 CADPS2Q86UW7 1296 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 TNPO1Q92973 898 aaKnown RBP9.12□□□□□ -0.95
PKP4-217ENST00000628904 FBXW7Q969H0 707 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 MYO3AQ8NEV4 1616 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 PRPF40BQ6NWY9 871 aaKnown RBP9.12□□□□□ -0.95
PKP4-217ENST00000628904 FERMT3Q86UX7 667 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 RAB11FIP4Q86YS3 637 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 CPSF1Q10570 1443 aaKnown RBP9.12□□□□□ -0.95
PKP4-217ENST00000628904 SOS1Q07889 1333 aaPredicted RBP9.12□□□□□ -0.95
PKP4-217ENST00000628904 IGSF1Q8N6C5 1336 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 IFNL2Q8IZJ0 200 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 GPATCH3Q96I76 525 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 ZNF594Q96JF6 807 aaPredicted RBP9.12□□□□□ -0.95
PKP4-217ENST00000628904 ARID3AQ99856 593 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 LRRC2Q9BYS8 371 aa9.12□□□□□ -0.95
PKP4-217ENST00000628904 BICC1Q9H694 974 aaKnown RBP9.12□□□□□ -0.95
PKP4-217ENST00000628904 CEBPZQ03701 1054 aaKnown RBP9.11□□□□□ -0.95
PKP4-217ENST00000628904 AMOTQ4VCS5 1084 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 ZNF790Q6PG37 636 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 PANK2Q9BZ23 570 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 RTL1A6NKG5 1358 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 WASHC4Q2M389 1173 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 ANKRD13DQ6ZTN6 518 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 DDX46Q7L014 1031 aaKnown RBP9.11□□□□□ -0.95
PKP4-217ENST00000628904 ARHGEF25Q86VW2 580 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 TMEM131LA2VDJ0 1609 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 APPP05067 770 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 CCDC24Q8N4L8 307 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 BTG4Q9NY30 223 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 TBC1D2BQ9UPU7 963 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 ATP7BP35670 1465 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 PREX1Q8TCU6 1659 aa9.11□□□□□ -0.95
PKP4-217ENST00000628904 ATP8B2P98198 1209 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 LARP1Q6PKG0 1096 aaKnown RBP9.1□□□□□ -0.95
PKP4-217ENST00000628904 CNTROBQ8N137 903 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 PALD1Q9ULE6 856 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 PIK3R4Q99570 1358 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 MYOM1P52179 1685 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 GOLGB1Q14789 3259 aaKnown RBP9.1□□□□□ -0.95
PKP4-217ENST00000628904 SETBP1Q9Y6X0 1596 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 SLFNL1Q499Z3 407 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 BCL11BQ9C0K0 894 aaPredicted RBP9.1□□□□□ -0.95
PKP4-217ENST00000628904 CHGBP05060 677 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 CASTP20810 708 aaKnown RBP9.1□□□□□ -0.95
PKP4-217ENST00000628904 LMBR1LQ6UX01 489 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 SMIM5Q71RC9 77 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 JAKMIP1Q96N16 626 aaKnown RBP9.1□□□□□ -0.95
PKP4-217ENST00000628904 PPLO60437 1756 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 AATKQ6ZMQ8 1374 aa9.1□□□□□ -0.95
PKP4-217ENST00000628904 FIBPO43427 364 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 GIGYF1O75420 1035 aaPredicted RBP9.09□□□□□ -0.95
PKP4-217ENST00000628904 TIMM10P62072 90 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 HELBQ8NG08 1087 aaPredicted RBP9.09□□□□□ -0.95
PKP4-217ENST00000628904 SIRT1Q96EB6 747 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 KIF1BPQ96EK5 621 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 SUCLG2Q96I99 432 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 IQSEC3Q9UPP2 1182 aaPredicted RBP9.09□□□□□ -0.95
PKP4-217ENST00000628904 KIAA0232Q92628 1395 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 PTMAP06454 111 aaKnown RBP9.09□□□□□ -0.95
PKP4-217ENST00000628904 NECAB1Q8N987 351 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 RBM27Q9P2N5 1060 aaKnown RBP9.09□□□□□ -0.95
PKP4-217ENST00000628904 LAMC1P11047 1609 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 GRM8O00222 908 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 TTLL7Q6ZT98 887 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 ZCRB1Q8TBF4 217 aaKnown RBP9.09□□□□□ -0.95
PKP4-217ENST00000628904 FAM89AQ96GI7 184 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 SLAIN2Q9P270 581 aa9.09□□□□□ -0.95
PKP4-217ENST00000628904 DDX11Q96FC9 970 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 TLR7Q9NYK1 1049 aaKnown RBP9.08□□□□□ -0.96
PKP4-217ENST00000628904 TMOD3Q9NYL9 352 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 NPHP3Q7Z494 1330 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 ZC3H13Q5T200 1668 aaKnown RBP9.08□□□□□ -0.96
PKP4-217ENST00000628904 KSR2Q6VAB6 950 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 CHST3Q7LGC8 479 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 CCDC83Q8IWF9 413 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 RABEP1Q15276 862 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 CCDC129Q6ZRS4 1044 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 FMNL2Q96PY5 1086 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 RICTORQ6R327 1708 aa9.08□□□□□ -0.96
PKP4-217ENST00000628904 SLC4A8Q2Y0W8 1093 aa9.07□□□□□ -0.96
PKP4-217ENST00000628904 FAM227BQ96M60 508 aa9.07□□□□□ -0.96
PKP4-217ENST00000628904 MTMR7Q9Y216 660 aa9.07□□□□□ -0.96
PKP4-217ENST00000628904 GOLGA6L4A6NEF3 574 aa9.07□□□□□ -0.96
PKP4-217ENST00000628904 SNRPA1P09661 255 aaKnown RBP9.07□□□□□ -0.96
PKP4-217ENST00000628904 HAND2P61296 217 aa9.07□□□□□ -0.96
PKP4-217ENST00000628904 NAP1L5Q96NT1 182 aaPredicted RBP9.07□□□□□ -0.96
PKP4-217ENST00000628904 USP26Q9BXU7 913 aa9.07□□□□□ -0.96
PKP4-217ENST00000628904 GOLIM4O00461 696 aa9.07□□□□□ -0.96
PKP4-217ENST00000628904 ZKSCAN1P17029 563 aaPredicted RBP9.07□□□□□ -0.96
PKP4-217ENST00000628904 SYNE4Q8N205 404 aa9.07□□□□□ -0.96
PKP4-217ENST00000628904 IQSEC2Q5JU85 1478 aa9.07□□□□□ -0.96
PKP4-217ENST00000628904 CYP27B1O15528 508 aa9.06□□□□□ -0.96
PKP4-217ENST00000628904 ARHGEF28Q8N1W1 1705 aaKnown RBP9.06□□□□□ -0.96
PKP4-217ENST00000628904 ESYT1Q9BSJ8 1104 aa9.06□□□□□ -0.96
PKP4-217ENST00000628904 HYPKQ9NX55 129 aa9.06□□□□□ -0.96
PKP4-217ENST00000628904 SRCAPQ6ZRS2 3230 aa9.06□□□□□ -0.96
PKP4-217ENST00000628904 ERBB3P21860 1342 aa9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 203.3 ms