RNA–Protein interactions for RNA: ENST00000628729.2

PDCD6-214, Transcript of programmed cell death 6, humanhuman

TSL 5 BASIC

Gene PDCD6, Length 1,073 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6-214ENST00000628729 POLRMTO00411 1230 aaKnown RBP22.31■■□□□ 1.16
PDCD6-214ENST00000628729 USPL1Q5W0Q7 1092 aa22.31■■□□□ 1.16
PDCD6-214ENST00000628729 BCS1LQ9Y276 419 aa22.31■■□□□ 1.16
PDCD6-214ENST00000628729 TM4SF1P30408 202 aa22.3■■□□□ 1.16
PDCD6-214ENST00000628729 VSIG10Q8N0Z9 540 aa22.3■■□□□ 1.16
PDCD6-214ENST00000628729 ZNF526Q8TF50 670 aaPredicted RBP22.3■■□□□ 1.16
PDCD6-214ENST00000628729 BCL2L12Q9HB09 334 aa22.3■■□□□ 1.16
PDCD6-214ENST00000628729 DLEC1Q9Y238 1755 aa22.3■■□□□ 1.16
PDCD6-214ENST00000628729 GNAT3A8MTJ3 354 aa22.29■■□□□ 1.16
PDCD6-214ENST00000628729 PPP2R1AP30153 589 aa22.29■■□□□ 1.16
PDCD6-214ENST00000628729 PRKAR2BP31323 418 aa22.29■■□□□ 1.16
PDCD6-214ENST00000628729 GAS2L2Q8NHY3 880 aa22.29■■□□□ 1.16
PDCD6-214ENST00000628729 ZNF496Q96IT1 587 aaPredicted RBP22.29■■□□□ 1.16
PDCD6-214ENST00000628729 HEG1Q9ULI3 1381 aa22.27■■□□□ 1.16
PDCD6-214ENST00000628729 ZNF790Q6PG37 636 aa22.27■■□□□ 1.16
PDCD6-214ENST00000628729 GPBP1L1Q9HC44 474 aaPredicted RBP22.27■■□□□ 1.16
PDCD6-214ENST00000628729 NARFQ9UHQ1 456 aa22.27■■□□□ 1.16
PDCD6-214ENST00000628729 CHRNA5P30532 468 aa22.26■■□□□ 1.15
PDCD6-214ENST00000628729 NFIXQ14938 502 aa22.26■■□□□ 1.15
PDCD6-214ENST00000628729 CARMIL3Q8ND23 1372 aa22.25■■□□□ 1.15
PDCD6-214ENST00000628729 BCORQ6W2J9 1755 aa22.25■■□□□ 1.15
PDCD6-214ENST00000628729 ZPR1O75312 459 aa22.25■■□□□ 1.15
PDCD6-214ENST00000628729 FCHSD2O94868 740 aa22.25■■□□□ 1.15
PDCD6-214ENST00000628729 TEFQ10587 303 aa22.25■■□□□ 1.15
PDCD6-214ENST00000628729 TTC5Q8N0Z6 440 aa22.25■■□□□ 1.15
PDCD6-214ENST00000628729 ANKRD31Q8N7Z5 1873 aa22.24■■□□□ 1.15
PDCD6-214ENST00000628729 KCNQ3O43525 872 aa22.24■■□□□ 1.15
PDCD6-214ENST00000628729 CANXP27824 592 aaKnown RBP22.24■■□□□ 1.15
PDCD6-214ENST00000628729 CFAP53Q96M91 514 aa22.24■■□□□ 1.15
PDCD6-214ENST00000628729 EIF5P55010 431 aaKnown RBP22.23■■□□□ 1.15
PDCD6-214ENST00000628729 COL11A2P13942 1736 aaPredicted RBP22.23■■□□□ 1.15
PDCD6-214ENST00000628729 ARHGAP27Q6ZUM4 889 aa22.21■■□□□ 1.15
PDCD6-214ENST00000628729 PIM2Q9P1W9 311 aa22.21■■□□□ 1.15
PDCD6-214ENST00000628729 DLG5Q8TDM6 1919 aa22.21■■□□□ 1.15
PDCD6-214ENST00000628729 SBF1O95248 1867 aa22.2■■□□□ 1.14
PDCD6-214ENST00000628729 KIF3CO14782 793 aa22.2■■□□□ 1.14
PDCD6-214ENST00000628729 U2AF1L5P0DN76 240 aaPredicted RBP22.2■■□□□ 1.14
PDCD6-214ENST00000628729 U2AF1Q01081 240 aaKnown RBP eCLIP22.2■■□□□ 1.14
PDCD6-214ENST00000628729 STARD3NLO95772 234 aa22.19■■□□□ 1.14
PDCD6-214ENST00000628729 MCM10Q7L590 875 aa22.18■■□□□ 1.14
PDCD6-214ENST00000628729 FMNL2Q96PY5 1086 aa22.18■■□□□ 1.14
PDCD6-214ENST00000628729 PRAMEF22A3QJZ6 481 aa22.17■■□□□ 1.14
PDCD6-214ENST00000628729 BTBD11A6QL63 1104 aa22.17■■□□□ 1.14
PDCD6-214ENST00000628729 A1BGP04217 495 aa22.17■■□□□ 1.14
PDCD6-214ENST00000628729 SERPINB2P05120 415 aa22.17■■□□□ 1.14
PDCD6-214ENST00000628729 DALRD3Q5D0E6 543 aaKnown RBP22.17■■□□□ 1.14
PDCD6-214ENST00000628729 NUDCQ9Y266 331 aa22.17■■□□□ 1.14
PDCD6-214ENST00000628729 DCTN1Q14203 1278 aa22.16■■□□□ 1.14
PDCD6-214ENST00000628729 TBC1D9BQ66K14 1250 aa22.16■■□□□ 1.14
PDCD6-214ENST00000628729 LAMB4A4D0S4 1761 aa22.16■■□□□ 1.14
PDCD6-214ENST00000628729 KDM3BQ7LBC6 1761 aa22.16■■□□□ 1.14
PDCD6-214ENST00000628729 IL6STP40189 918 aaPredicted RBP22.14■■□□□ 1.13
PDCD6-214ENST00000628729 PIP4K2AP48426 406 aaPredicted RBP22.14■■□□□ 1.13
PDCD6-214ENST00000628729 C9orf131Q5VYM1 1079 aa22.14■■□□□ 1.13
PDCD6-214ENST00000628729 BICDL1Q6ZP65 573 aa22.14■■□□□ 1.13
PDCD6-214ENST00000628729 TBC1D2BQ9UPU7 963 aa22.14■■□□□ 1.13
PDCD6-214ENST00000628729 ZNF330Q9Y3S2 320 aaPredicted RBP22.14■■□□□ 1.13
PDCD6-214ENST00000628729 TEX13AQ9BXU3 409 aaPredicted RBP22.13■■□□□ 1.13
PDCD6-214ENST00000628729 USP16Q9Y5T5 823 aa22.13■■□□□ 1.13
PDCD6-214ENST00000628729 TIAM2Q8IVF5 1701 aa22.13■■□□□ 1.13
PDCD6-214ENST00000628729 A0A087WZG4 1122 aa22.12■■□□□ 1.13
PDCD6-214ENST00000628729 CAMTA2O94983 1202 aa22.12■■□□□ 1.13
PDCD6-214ENST00000628729 NMRK2Q9NPI5 230 aa22.12■■□□□ 1.13
PDCD6-214ENST00000628729 PRELPP51888 382 aa22.11■■□□□ 1.13
PDCD6-214ENST00000628729 RASSF7Q02833 373 aa22.11■■□□□ 1.13
PDCD6-214ENST00000628729 CACNA1SQ13698 1873 aa22.1■■□□□ 1.13
PDCD6-214ENST00000628729 CCDC24Q8N4L8 307 aa22.1■■□□□ 1.13
PDCD6-214ENST00000628729 HSPA6P17066 643 aa22.09■■□□□ 1.13
PDCD6-214ENST00000628729 PRR5LQ6MZQ0 368 aa22.09■■□□□ 1.13
PDCD6-214ENST00000628729 RTF1Q92541 710 aaKnown RBP22.09■■□□□ 1.13
PDCD6-214ENST00000628729 RNF181Q9P0P0 153 aa22.09■■□□□ 1.13
PDCD6-214ENST00000628729 TNRC6CQ9HCJ0 1690 aaKnown RBP22.09■■□□□ 1.13
PDCD6-214ENST00000628729 ARFGEF2Q9Y6D5 1785 aa22.08■■□□□ 1.13
PDCD6-214ENST00000628729 C2CD5Q86YS7 1000 aa22.08■■□□□ 1.13
PDCD6-214ENST00000628729 PLEKHF1Q96S99 279 aa22.08■■□□□ 1.13
PDCD6-214ENST00000628729 CCDC88AQ3V6T2 1871 aa22.07■■□□□ 1.12
PDCD6-214ENST00000628729 HTATSF1O43719 755 aaKnown RBP22.07■■□□□ 1.12
PDCD6-214ENST00000628729 NBPF26B4DH59 902 aa22.06■■□□□ 1.12
PDCD6-214ENST00000628729 NBPF10Q6P3W6 841 aaKnown RBP22.06■■□□□ 1.12
PDCD6-214ENST00000628729 DZIP3Q86Y13 1208 aaKnown RBP22.06■■□□□ 1.12
PDCD6-214ENST00000628729 NBPF15Q8N660 670 aa22.06■■□□□ 1.12
PDCD6-214ENST00000628729 FER1L6Q2WGJ9 1857 aa22.06■■□□□ 1.12
PDCD6-214ENST00000628729 NFKBIEO00221 500 aa22.05■■□□□ 1.12
PDCD6-214ENST00000628729 SNRPA1P09661 255 aaKnown RBP22.05■■□□□ 1.12
PDCD6-214ENST00000628729 TTLL6Q8N841 843 aa22.05■■□□□ 1.12
PDCD6-214ENST00000628729 MIS18AQ9NYP9 233 aa22.05■■□□□ 1.12
PDCD6-214ENST00000628729 H0YIN7 160 aa22.03■■□□□ 1.12
PDCD6-214ENST00000628729 THUMPD2Q9BTF0 503 aaKnown RBP22.03■■□□□ 1.12
PDCD6-214ENST00000628729 BRIP1Q9BX63 1249 aa22.03■■□□□ 1.12
PDCD6-214ENST00000628729 SLX4Q8IY92 1834 aa22.03■■□□□ 1.12
PDCD6-214ENST00000628729 TAF7Q15545 349 aaPredicted RBP22.02■■□□□ 1.12
PDCD6-214ENST00000628729 TOMM70O94826 608 aa22.01■■□□□ 1.11
PDCD6-214ENST00000628729 CNBD1Q8NA66 436 aa22.01■■□□□ 1.11
PDCD6-214ENST00000628729 SETDB2Q96T68 719 aa22.01■■□□□ 1.11
PDCD6-214ENST00000628729 WDR90Q96KV7 1748 aa22■■□□□ 1.11
PDCD6-214ENST00000628729 NFE2L2Q16236 605 aa22■■□□□ 1.11
PDCD6-214ENST00000628729 DICER1Q9UPY3 1922 aaKnown RBP22■■□□□ 1.11
PDCD6-214ENST00000628729 LMNB1P20700 586 aa21.98■■□□□ 1.11
PDCD6-214ENST00000628729 PDE6BP35913 854 aa21.98■■□□□ 1.11
PDCD6-214ENST00000628729 ZNF622Q969S3 477 aaKnown RBP eCLIP21.98■■□□□ 1.111e-6■■□□□ 14.2
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms