RNA–Protein interactions for RNA: ENST00000626782.2

CHD2-207, Transcript of chromodomain helicase DNA binding protein 2, humanhuman

TSL 2 BASIC

Gene CHD2, Length 2,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD2-207ENST00000626782 PI4KAP1Q8N8J0 262 aa12.94□□□□□ -0.34
CHD2-207ENST00000626782 DDX54Q8TDD1 881 aaKnown RBP12.94□□□□□ -0.34
CHD2-207ENST00000626782 GCC1Q96CN9 775 aa12.94□□□□□ -0.34
CHD2-207ENST00000626782 USP44Q9H0E7 712 aa12.94□□□□□ -0.34
CHD2-207ENST00000626782 SLIT2O94813 1529 aa12.93□□□□□ -0.34
CHD2-207ENST00000626782 SEC24BO95487 1268 aa12.93□□□□□ -0.34
CHD2-207ENST00000626782 CABP4P57796 275 aa12.93□□□□□ -0.34
CHD2-207ENST00000626782 DCTPP1Q9H773 170 aa12.93□□□□□ -0.34
CHD2-207ENST00000626782 BEND3Q5T5X7 828 aa12.92□□□□□ -0.34
CHD2-207ENST00000626782 LRP10Q7Z4F1 713 aa12.92□□□□□ -0.34
CHD2-207ENST00000626782 RPAP2Q8IXW5 612 aaPredicted RBP12.92□□□□□ -0.34
CHD2-207ENST00000626782 CCDC9Q9Y3X0 531 aaKnown RBP12.92□□□□□ -0.34
CHD2-207ENST00000626782 BCL9LQ86UU0 1499 aa12.92□□□□□ -0.34
CHD2-207ENST00000626782 ANKRD45Q5TZF3 282 aa12.92□□□□□ -0.34
CHD2-207ENST00000626782 USP16Q9Y5T5 823 aa12.92□□□□□ -0.34
CHD2-207ENST00000626782 DNAAF4Q8WXU2 420 aa12.91□□□□□ -0.34
CHD2-207ENST00000626782 DDX21Q9NR30 783 aaKnown RBP eCLIP12.91□□□□□ -0.34
CHD2-207ENST00000626782 ITGB4P16144 1822 aa12.91□□□□□ -0.34
CHD2-207ENST00000626782 ERVV-2B6SEH9 535 aa12.91□□□□□ -0.34
CHD2-207ENST00000626782 NPM2Q86SE8 214 aaKnown RBP12.91□□□□□ -0.34
CHD2-207ENST00000626782 TNS2Q63HR2 1409 aa12.91□□□□□ -0.34
CHD2-207ENST00000626782 SPATA31A1Q5TZJ5 1347 aa12.9□□□□□ -0.34
CHD2-207ENST00000626782 SPATA31A6Q5VVP1 1343 aa12.9□□□□□ -0.34
CHD2-207ENST00000626782 GNAI2P04899 355 aa12.9□□□□□ -0.34
CHD2-207ENST00000626782 PIP4K2AP48426 406 aaPredicted RBP12.9□□□□□ -0.34
CHD2-207ENST00000626782 UNC5CLQ8IV45 518 aa12.9□□□□□ -0.34
CHD2-207ENST00000626782 LRRFIP2Q9Y608 721 aaKnown RBP12.9□□□□□ -0.34
CHD2-207ENST00000626782 PNMA6EA0A0J9YXQ4 647 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 NBPF7P0C2Y1 421 aaPredicted RBP12.89□□□□□ -0.35
CHD2-207ENST00000626782 MEX3CQ5U5Q3 659 aaKnown RBP12.89□□□□□ -0.35
CHD2-207ENST00000626782 TTC5Q8N0Z6 440 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 FMNL2Q96PY5 1086 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 CHMP4AQ9BY43 222 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 SRCIN1Q9C0H9 1055 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 MAP3K2Q9Y2U5 619 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 GNAI3P08754 354 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 SNRPA1P09661 255 aaKnown RBP12.89□□□□□ -0.35
CHD2-207ENST00000626782 HYPKQ9NX55 129 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 SPATA31A5Q5VU36 1347 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 SPATA31A7Q8IWB4 1347 aa12.89□□□□□ -0.35
CHD2-207ENST00000626782 KSR2Q6VAB6 950 aa12.88□□□□□ -0.35
CHD2-207ENST00000626782 NWD2Q9ULI1 1742 aa12.88□□□□□ -0.35
CHD2-207ENST00000626782 ARFGEF2Q9Y6D5 1785 aa12.88□□□□□ -0.35
CHD2-207ENST00000626782 MYL6BP14649 208 aa12.88□□□□□ -0.35
CHD2-207ENST00000626782 FNBP4Q8N3X1 1017 aaPredicted RBP12.88□□□□□ -0.35
CHD2-207ENST00000626782 USP21Q9UK80 565 aa12.88□□□□□ -0.35
CHD2-207ENST00000626782 ANP32AP39687 249 aaKnown RBP12.87□□□□□ -0.35
CHD2-207ENST00000626782 FAM98CQ17RN3 349 aaKnown RBP12.87□□□□□ -0.35
CHD2-207ENST00000626782 CWF19L2Q2TBE0 894 aaKnown RBP12.87□□□□□ -0.35
CHD2-207ENST00000626782 C16orf71Q8IYS4 520 aaPredicted RBP12.87□□□□□ -0.35
CHD2-207ENST00000626782 OTUD7AQ8TE49 926 aaPredicted RBP12.87□□□□□ -0.35
CHD2-207ENST00000626782 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.87□□□□□ -0.35
CHD2-207ENST00000626782 SMARCA5O60264 1052 aaPredicted RBP12.86□□□□□ -0.35
CHD2-207ENST00000626782 AIMP1Q12904 312 aaKnown RBP12.86□□□□□ -0.35
CHD2-207ENST00000626782 AFF2P51816 1311 aa12.86□□□□□ -0.35
CHD2-207ENST00000626782 NBPF26B4DH59 902 aa12.86□□□□□ -0.35
CHD2-207ENST00000626782 UBTFL1P0CB47 393 aaPredicted RBP12.86□□□□□ -0.35
CHD2-207ENST00000626782 ATP8B2P98198 1209 aa12.86□□□□□ -0.35
CHD2-207ENST00000626782 NBPF14Q5TI25 921 aa12.86□□□□□ -0.35
CHD2-207ENST00000626782 NBPF10Q6P3W6 841 aaKnown RBP12.86□□□□□ -0.35
CHD2-207ENST00000626782 NBPF15Q8N660 670 aa12.86□□□□□ -0.35
CHD2-207ENST00000626782 XAGE3Q8WTP9 111 aa12.86□□□□□ -0.35
CHD2-207ENST00000626782 DOT1LQ8TEK3 1739 aa12.86□□□□□ -0.35
CHD2-207ENST00000626782 IGKV5-2P06315 115 aa12.85□□□□□ -0.35
CHD2-207ENST00000626782 NUP188Q5SRE5 1749 aa12.85□□□□□ -0.35
CHD2-207ENST00000626782 COPS6Q7L5N1 327 aa12.85□□□□□ -0.35
CHD2-207ENST00000626782 IPO9Q96P70 1041 aaKnown RBP12.85□□□□□ -0.35
CHD2-207ENST00000626782 APBB1O00213 710 aa12.85□□□□□ -0.35
CHD2-207ENST00000626782 PTCD1O75127 700 aaKnown RBP12.85□□□□□ -0.35
CHD2-207ENST00000626782 VPS72Q15906 364 aa12.85□□□□□ -0.35
CHD2-207ENST00000626782 PLEKHM2Q8IWE5 1019 aa12.85□□□□□ -0.35
CHD2-207ENST00000626782 PIGBQ92521 554 aa12.85□□□□□ -0.35
CHD2-207ENST00000626782 EXOC6BQ9Y2D4 811 aa12.85□□□□□ -0.35
CHD2-207ENST00000626782 HMMRO75330 724 aa12.84□□□□□ -0.35
CHD2-207ENST00000626782 ASAP1Q9ULH1 1129 aa12.84□□□□□ -0.35
CHD2-207ENST00000626782 AFDNP55196 1824 aaKnown RBP12.84□□□□□ -0.35
CHD2-207ENST00000626782 TUBGCP6Q96RT7 1819 aa12.84□□□□□ -0.35
CHD2-207ENST00000626782 EXOC5O00471 708 aa12.83□□□□□ -0.35
CHD2-207ENST00000626782 GSPT1P15170 499 aaKnown RBP12.83□□□□□ -0.35
CHD2-207ENST00000626782 BMP2KLQ5H9B9 411 aa12.83□□□□□ -0.35
CHD2-207ENST00000626782 SSH3Q8TE77 659 aa12.83□□□□□ -0.35
CHD2-207ENST00000626782 BCL9O00512 1426 aa12.83□□□□□ -0.36
CHD2-207ENST00000626782 IBTKQ9P2D0 1353 aaPredicted RBP12.83□□□□□ -0.36
CHD2-207ENST00000626782 ALDH1L1O75891 902 aa12.83□□□□□ -0.36
CHD2-207ENST00000626782 POLA2Q14181 598 aa12.83□□□□□ -0.36
CHD2-207ENST00000626782 MARCH10Q8NA82 808 aaPredicted RBP12.83□□□□□ -0.36
CHD2-207ENST00000626782 LINS1Q8NG48 757 aa12.83□□□□□ -0.36
CHD2-207ENST00000626782 KAZALD1Q96I82 304 aa12.83□□□□□ -0.36
CHD2-207ENST00000626782 TMOD3Q9NYL9 352 aa12.83□□□□□ -0.36
CHD2-207ENST00000626782 UTYO14607 1347 aa12.82□□□□□ -0.36
CHD2-207ENST00000626782 FAM182BQ5T319 152 aa12.82□□□□□ -0.36
CHD2-207ENST00000626782 PPP1R42Q7Z4L9 355 aa12.82□□□□□ -0.36
CHD2-207ENST00000626782 BCL11AQ9H165 835 aa12.82□□□□□ -0.36
CHD2-207ENST00000626782 SALL3Q9BXA9 1300 aa12.82□□□□□ -0.36
CHD2-207ENST00000626782 DDX58O95786 925 aaKnown RBP12.82□□□□□ -0.36
CHD2-207ENST00000626782 A1BGP04217 495 aa12.82□□□□□ -0.36
CHD2-207ENST00000626782 DDB1Q16531 1140 aa12.82□□□□□ -0.36
CHD2-207ENST00000626782 ATG3Q9NT62 314 aa12.82□□□□□ -0.36
CHD2-207ENST00000626782 A0A0G2JS52 829 aa12.81□□□□□ -0.36
CHD2-207ENST00000626782 NEURL1BA8MQ27 555 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms