RNA–Protein interactions for RNA: ENST00000622362.1

FAM200B-223, Transcript of family with sequence similarity 200 member B, human

APPRIS P1 TSL 1 (best) BASIC

Gene FAM200B, Length 4,377 nt, Biotype protein coding, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FAM200B-223	ENST00000622362	SAMD1	Q6SPF0	538 aa	Predicted RBP	13.73	□□□□□ -0.21
FAM200B-223	ENST00000622362	SRCIN1	Q9C0H9	1055 aa		13.73	□□□□□ -0.21
FAM200B-223	ENST00000622362	SCAND2P	Q9GZW5	306 aa	Predicted RBP	13.73	□□□□□ -0.21
FAM200B-223	ENST00000622362	VIRMA	Q69YN4	1812 aa	Known RBP	13.73	□□□□□ -0.21
FAM200B-223	ENST00000622362	SSH1	Q8WYL5	1049 aa		13.73	□□□□□ -0.21
FAM200B-223	ENST00000622362	LUC7L	Q9NQ29	371 aa	Known RBP	13.73	□□□□□ -0.21
FAM200B-223	ENST00000622362	ZSCAN12	O43309	604 aa		13.73	□□□□□ -0.21
FAM200B-223	ENST00000622362	NUTM2G	Q5VZR2	741 aa		13.73	□□□□□ -0.21
FAM200B-223	ENST00000622362	LARP6	Q9BRS8	491 aa	Known RBP	13.73	□□□□□ -0.21
FAM200B-223	ENST00000622362	SMARCA5	O60264	1052 aa	Predicted RBP	13.72	□□□□□ -0.21
FAM200B-223	ENST00000622362	ERC1	Q8IUD2	1116 aa		13.72	□□□□□ -0.21
FAM200B-223	ENST00000622362	ANO10	Q9NW15	660 aa		13.72	□□□□□ -0.21
FAM200B-223	ENST00000622362	PPRC1	Q5VV67	1664 aa	Known RBP	13.72	□□□□□ -0.21
FAM200B-223	ENST00000622362	MYOM2	P54296	1465 aa		13.72	□□□□□ -0.21
FAM200B-223	ENST00000622362	NOLC1	Q14978	699 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
FAM200B-223	ENST00000622362	SULT6B1	Q6IMI4	303 aa		13.72	□□□□□ -0.21
FAM200B-223	ENST00000622362	TFIP11	Q9UBB9	837 aa	Known RBP	13.72	□□□□□ -0.21
FAM200B-223	ENST00000622362	KDM5A	P29375	1690 aa	Known RBP	13.72	□□□□□ -0.21
FAM200B-223	ENST00000622362	ZNF165	P49910	485 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	BMS1	Q14692	1282 aa	Known RBP	13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	CCAR1	Q8IX12	1150 aa	Known RBP	13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	TRIM22	Q8IYM9	498 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	KRT222	Q8N1A0	295 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	TTC12	Q9H892	705 aa	Predicted RBP	13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	ZSCAN23	Q3MJ62	389 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	TMX1	Q9H3N1	280 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	TBC1D2B	Q9UPU7	963 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	PPL	O60437	1756 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	STIM1	Q13586	685 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	KIAA1328	Q86T90	577 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	TANGO6	Q9C0B7	1094 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	ZSWIM4	Q9H7M6	989 aa		13.71	□□□□□ -0.21
FAM200B-223	ENST00000622362	ANKRD62	A6NC57	917 aa		13.71	□□□□□ -0.22
FAM200B-223	ENST00000622362	IGHD	P01880	384 aa		13.71	□□□□□ -0.22
FAM200B-223	ENST00000622362	USP32	Q8NFA0	1604 aa		13.71	□□□□□ -0.22
FAM200B-223	ENST00000622362	IQCE	Q6IPM2	695 aa		13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	CDK5RAP3	Q96JB5	506 aa		13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	ZKSCAN5	Q9Y2L8	839 aa		13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	TOP1	P11387	765 aa	Known RBP	13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	NUTM1	Q86Y26	1132 aa		13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	SMARCC1	Q92922	1105 aa	Predicted RBP	13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	SYTL4	Q96C24	671 aa	Predicted RBP	13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	THUMPD2	Q9BTF0	503 aa	Known RBP	13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	MNAT1	P51948	309 aa		13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	EIF5	P55010	431 aa	Known RBP	13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	NLRP6	P59044	892 aa		13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	AACS	Q86V21	672 aa		13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	EFCAB6	Q5THR3	1501 aa		13.7	□□□□□ -0.22
FAM200B-223	ENST00000622362	KIF5C	O60282	957 aa		13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	KLHL10	Q6JEL2	608 aa		13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	RAPGEF4	Q8WZA2	1011 aa		13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	ATP7A	Q04656	1500 aa		13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	PDIA4	P13667	645 aa	Known RBP	13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	SETBP1	Q9Y6X0	1596 aa		13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	RNF187	Q5TA31	235 aa	Predicted RBP	13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	PRPF40B	Q6NWY9	871 aa	Known RBP	13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	ZNF521	Q96K83	1311 aa		13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	KIF1B	O60333	1816 aa		13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	SEPT7	Q16181	437 aa	Known RBP	13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	TICAM2	Q86XR7	235 aa		13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	CCDC148	Q8NFR7	591 aa		13.69	□□□□□ -0.22
FAM200B-223	ENST00000622362	GAS2L2	Q8NHY3	880 aa		13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	NOL12	Q9UGY1	213 aa	Known RBP eCLIP	13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362		V9GYY5	206 aa	Predicted RBP	13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	DUSP27	Q5VZP5	1158 aa		13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	GIMAP6	Q6P9H5	292 aa		13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	RRAGD	Q9NQL2	400 aa	Predicted RBP	13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	INCENP	Q9NQS7	918 aa		13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	TMPO	P42166	694 aa	Known RBP	13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	TBC1D9	Q6ZT07	1266 aa		13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	CPLX3	Q8WVH0	158 aa		13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	ZHX3	Q9H4I2	956 aa		13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	RAI14	Q9P0K7	980 aa		13.68	□□□□□ -0.22
FAM200B-223	ENST00000622362	KRT18	P05783	430 aa	Known RBP	13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	CASQ1	P31415	396 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	SNW1	Q13573	536 aa	Known RBP	13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	MAP9	Q49MG5	647 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	CEP135	Q66GS9	1140 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	NUP133	Q8WUM0	1156 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	FRMPD1	Q5SYB0	1578 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	NPC1L1	Q9UHC9	1359 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	RAB11FIP3	O75154	756 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	MX1	P20591	662 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	GUCY1B3	Q02153	619 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	ADGRB3	O60242	1522 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	BIN1	O00499	593 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	NEMF	O60524	1076 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	KRT32	Q14532	448 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	LRSAM1	Q6UWE0	723 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	PSME1	Q06323	249 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	SYCP1	Q15431	976 aa		13.67	□□□□□ -0.22
FAM200B-223	ENST00000622362	PIK3C2B	O00750	1634 aa		13.66	□□□□□ -0.22
FAM200B-223	ENST00000622362	UTP3	Q9NQZ2	479 aa	Known RBP eCLIP	13.66	□□□□□ -0.22
FAM200B-223	ENST00000622362	ZNF518A	Q6AHZ1	1483 aa		13.66	□□□□□ -0.22
FAM200B-223	ENST00000622362	CCDC186	Q7Z3E2	898 aa		13.66	□□□□□ -0.22
FAM200B-223	ENST00000622362	PLCD3	Q8N3E9	789 aa		13.66	□□□□□ -0.22
FAM200B-223	ENST00000622362	LIMCH1	Q9UPQ0	1083 aa		13.66	□□□□□ -0.22
FAM200B-223	ENST00000622362	TRH	P20396	242 aa	Predicted RBP	13.66	□□□□□ -0.22
FAM200B-223	ENST00000622362	TMC6	Q7Z403	805 aa		13.66	□□□□□ -0.22
FAM200B-223	ENST00000622362	NLRP2	Q9NX02	1062 aa		13.66	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 138.1 ms