RNA–Protein interactions for RNA: ENST00000621748.1

SCAMP4-213, Transcript of secretory carrier membrane protein 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SCAMP4, Length 1,172 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP4-213ENST00000621748 STARD3NLO95772 234 aa23.85■■□□□ 1.41
SCAMP4-213ENST00000621748 FMNL2Q96PY5 1086 aa23.85■■□□□ 1.41
SCAMP4-213ENST00000621748 ZPR1O75312 459 aa23.84■■□□□ 1.41
SCAMP4-213ENST00000621748 CANXP27824 592 aaKnown RBP23.84■■□□□ 1.41
SCAMP4-213ENST00000621748 USPL1Q5W0Q7 1092 aa23.84■■□□□ 1.41
SCAMP4-213ENST00000621748 PARP3Q9Y6F1 533 aa23.84■■□□□ 1.41
SCAMP4-213ENST00000621748 COL15A1P39059 1388 aa23.83■■□□□ 1.41
SCAMP4-213ENST00000621748 GRIN3BO60391 1043 aa23.83■■□□□ 1.41
SCAMP4-213ENST00000621748 NEFMP07197 916 aa23.83■■□□□ 1.41
SCAMP4-213ENST00000621748 TEX13AQ9BXU3 409 aaPredicted RBP23.83■■□□□ 1.41
SCAMP4-213ENST00000621748 WWC3Q9ULE0 1092 aa23.83■■□□□ 1.41
SCAMP4-213ENST00000621748 DDR1Q08345 913 aa23.82■■□□□ 1.4
SCAMP4-213ENST00000621748 NARFQ9UHQ1 456 aa23.82■■□□□ 1.4
SCAMP4-213ENST00000621748 MYBBP1AQ9BQG0 1328 aaKnown RBP23.82■■□□□ 1.4
SCAMP4-213ENST00000621748 TM4SF1P30408 202 aa23.81■■□□□ 1.4
SCAMP4-213ENST00000621748 EIF5P55010 431 aaKnown RBP23.81■■□□□ 1.4
SCAMP4-213ENST00000621748 C10orf71Q711Q0 1435 aa23.81■■□□□ 1.4
SCAMP4-213ENST00000621748 NFE2L2Q16236 605 aa23.8■■□□□ 1.4
SCAMP4-213ENST00000621748 KIAA1551Q9HCM1 1747 aa23.8■■□□□ 1.4
SCAMP4-213ENST00000621748 N4BP2Q86UW6 1770 aaPredicted RBP23.8■■□□□ 1.4
SCAMP4-213ENST00000621748 ZNF316A6NFI3 1004 aaPredicted RBP23.79■■□□□ 1.4
SCAMP4-213ENST00000621748 TGFB2P61812 414 aa23.79■■□□□ 1.4
SCAMP4-213ENST00000621748 TAF7Q15545 349 aaPredicted RBP23.79■■□□□ 1.4
SCAMP4-213ENST00000621748 PNNQ9H307 717 aaKnown RBP23.79■■□□□ 1.4
SCAMP4-213ENST00000621748 BCL2L12Q9HB09 334 aa23.79■■□□□ 1.4
SCAMP4-213ENST00000621748 PXDNLA1KZ92 1463 aa23.79■■□□□ 1.4
SCAMP4-213ENST00000621748 A0A0G2JLW4 131 aa23.78■■□□□ 1.4
SCAMP4-213ENST00000621748 PRAMEF22A3QJZ6 481 aa23.78■■□□□ 1.4
SCAMP4-213ENST00000621748 A1BGP04217 495 aa23.78■■□□□ 1.4
SCAMP4-213ENST00000621748 ZNF784Q8NCA9 323 aaPredicted RBP23.78■■□□□ 1.4
SCAMP4-213ENST00000621748 MIS18AQ9NYP9 233 aa23.78■■□□□ 1.4
SCAMP4-213ENST00000621748 USP16Q9Y5T5 823 aa23.78■■□□□ 1.4
SCAMP4-213ENST00000621748 POLRMTO00411 1230 aaKnown RBP23.77■■□□□ 1.4
SCAMP4-213ENST00000621748 MAPK8IP3Q9UPT6 1336 aa23.77■■□□□ 1.4
SCAMP4-213ENST00000621748 NFIXQ14938 502 aa23.76■■□□□ 1.39
SCAMP4-213ENST00000621748 THUMPD2Q9BTF0 503 aaKnown RBP23.76■■□□□ 1.39
SCAMP4-213ENST00000621748 SNRPA1P09661 255 aaKnown RBP23.75■■□□□ 1.39
SCAMP4-213ENST00000621748 IL6STP40189 918 aaPredicted RBP23.75■■□□□ 1.39
SCAMP4-213ENST00000621748 A0A087WZG4 1122 aa23.74■■□□□ 1.39
SCAMP4-213ENST00000621748 DPEP1P16444 411 aa23.74■■□□□ 1.39
SCAMP4-213ENST00000621748 PRKRIP1Q9H875 184 aaPredicted RBP23.74■■□□□ 1.39
SCAMP4-213ENST00000621748 ZNF330Q9Y3S2 320 aaPredicted RBP23.74■■□□□ 1.39
SCAMP4-213ENST00000621748 AFDNP55196 1824 aaKnown RBP23.73■■□□□ 1.39
SCAMP4-213ENST00000621748 TBC1D2BQ9UPU7 963 aa23.73■■□□□ 1.39
SCAMP4-213ENST00000621748 KCNA3P22001 575 aa23.72■■□□□ 1.39
SCAMP4-213ENST00000621748 PIP4K2AP48426 406 aaPredicted RBP23.72■■□□□ 1.39
SCAMP4-213ENST00000621748 BRCA1P38398 1863 aaKnown RBP23.7■■□□□ 1.39
SCAMP4-213ENST00000621748 RIPK4P57078 832 aa23.7■■□□□ 1.38
SCAMP4-213ENST00000621748 PNISRQ8TF01 805 aaKnown RBP23.7■■□□□ 1.38
SCAMP4-213ENST00000621748 KDM3BQ7LBC6 1761 aa23.7■■□□□ 1.38
SCAMP4-213ENST00000621748 SERPINB2P05120 415 aa23.69■■□□□ 1.38
SCAMP4-213ENST00000621748 BICDL1Q6ZP65 573 aa23.69■■□□□ 1.38
SCAMP4-213ENST00000621748 BCS1LQ9Y276 419 aa23.69■■□□□ 1.38
SCAMP4-213ENST00000621748 NRXN2Q9P2S2 1712 aa23.68■■□□□ 1.38
SCAMP4-213ENST00000621748 CAMTA2O94983 1202 aa23.68■■□□□ 1.38
SCAMP4-213ENST00000621748 TMPOP42166 694 aaKnown RBP23.68■■□□□ 1.38
SCAMP4-213ENST00000621748 TBC1D9BQ66K14 1250 aa23.68■■□□□ 1.38
SCAMP4-213ENST00000621748 CCDC146Q8IYE0 955 aa23.68■■□□□ 1.38
SCAMP4-213ENST00000621748 SCN7AQ01118 1682 aa23.67■■□□□ 1.38
SCAMP4-213ENST00000621748 NBPF26B4DH59 902 aa23.67■■□□□ 1.38
SCAMP4-213ENST00000621748 CHRNA5P30532 468 aa23.67■■□□□ 1.38
SCAMP4-213ENST00000621748 NBPF10Q6P3W6 841 aaKnown RBP23.67■■□□□ 1.38
SCAMP4-213ENST00000621748 NPM2Q86SE8 214 aaKnown RBP23.67■■□□□ 1.38
SCAMP4-213ENST00000621748 NBPF15Q8N660 670 aa23.67■■□□□ 1.38
SCAMP4-213ENST00000621748 ADAMTS8Q9UP79 889 aa23.67■■□□□ 1.38
SCAMP4-213ENST00000621748 EIF4A1P60842 406 aaKnown RBP23.66■■□□□ 1.38
SCAMP4-213ENST00000621748 WDR43Q15061 677 aaKnown RBP eCLIP23.66■■□□□ 1.38
SCAMP4-213ENST00000621748 DZIP3Q86Y13 1208 aaKnown RBP23.66■■□□□ 1.38
SCAMP4-213ENST00000621748 RRP7AQ9Y3A4 280 aaKnown RBP23.66■■□□□ 1.38
SCAMP4-213ENST00000621748 GIGYF1O75420 1035 aaPredicted RBP23.65■■□□□ 1.38
SCAMP4-213ENST00000621748 PIM2Q9P1W9 311 aa23.65■■□□□ 1.38
SCAMP4-213ENST00000621748 RUNDC1Q96C34 613 aa23.63■■□□□ 1.37
SCAMP4-213ENST00000621748 LAMB4A4D0S4 1761 aa23.63■■□□□ 1.37
SCAMP4-213ENST00000621748 BCORQ6W2J9 1755 aa23.63■■□□□ 1.37
SCAMP4-213ENST00000621748 NEUROD2Q15784 382 aa23.62■■□□□ 1.37
SCAMP4-213ENST00000621748 CARMIL3Q8ND23 1372 aa23.62■■□□□ 1.37
SCAMP4-213ENST00000621748 ARFGEF1Q9Y6D6 1849 aa23.61■■□□□ 1.37
SCAMP4-213ENST00000621748 TSPYL4Q9UJ04 414 aa23.61■■□□□ 1.37
SCAMP4-213ENST00000621748 LMOD3Q0VAK6 560 aa23.6■■□□□ 1.37
SCAMP4-213ENST00000621748 DALRD3Q5D0E6 543 aaKnown RBP23.6■■□□□ 1.37
SCAMP4-213ENST00000621748 ARHGAP27Q6ZUM4 889 aa23.6■■□□□ 1.37
SCAMP4-213ENST00000621748 SETDB2Q96T68 719 aa23.59■■□□□ 1.37
SCAMP4-213ENST00000621748 TRIM35Q9UPQ4 493 aa23.59■■□□□ 1.37
SCAMP4-213ENST00000621748 ADCY9O60503 1353 aa23.59■■□□□ 1.37
SCAMP4-213ENST00000621748 PRR5LQ6MZQ0 368 aa23.58■■□□□ 1.37
SCAMP4-213ENST00000621748 CLEC4GQ6UXB4 293 aa23.58■■□□□ 1.37
SCAMP4-213ENST00000621748 CCDC24Q8N4L8 307 aa23.58■■□□□ 1.37
SCAMP4-213ENST00000621748 ATP10DQ9P241 1426 aa23.58■■□□□ 1.36
SCAMP4-213ENST00000621748 ANKRD31Q8N7Z5 1873 aa23.58■■□□□ 1.36
SCAMP4-213ENST00000621748 BABAM1Q9NWV8 329 aa23.57■■□□□ 1.36
SCAMP4-213ENST00000621748 C2CD5Q86YS7 1000 aa23.56■■□□□ 1.36
SCAMP4-213ENST00000621748 NGEFQ8N5V2 710 aa23.56■■□□□ 1.36
SCAMP4-213ENST00000621748 DLEC1Q9Y238 1755 aa23.55■■□□□ 1.36
SCAMP4-213ENST00000621748 BRIP1Q9BX63 1249 aa23.55■■□□□ 1.36
SCAMP4-213ENST00000621748 ZNF652Q9Y2D9 606 aa23.55■■□□□ 1.36
SCAMP4-213ENST00000621748 H0YIN7 160 aa23.54■■□□□ 1.36
SCAMP4-213ENST00000621748 HLFQ16534 295 aa23.54■■□□□ 1.36
SCAMP4-213ENST00000621748 MYL6BP14649 208 aa23.53■■□□□ 1.36
SCAMP4-213ENST00000621748 CCDC184Q52MB2 194 aa23.53■■□□□ 1.36
SCAMP4-213ENST00000621748 CNBD1Q8NA66 436 aa23.53■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms