RNA–Protein interactions for RNA: ENST00000621453.4

FMR1-219, Transcript of fragile X mental retardation 1, humanhuman

TSL 1 (best) BASIC

Gene FMR1, Length 1,864 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FMR1-219ENST00000621453 PIP4K2BP78356 416 aa34.72■■■■□ 3.15
FMR1-219ENST00000621453 MSH5O43196 834 aa34.71■■■■□ 3.15
FMR1-219ENST00000621453 GLI3P10071 1580 aa34.71■■■■□ 3.15
FMR1-219ENST00000621453 KSR2Q6VAB6 950 aa34.71■■■■□ 3.15
FMR1-219ENST00000621453 DISP2A7MBM2 1401 aa34.7■■■■□ 3.15
FMR1-219ENST00000621453 LAMB4A4D0S4 1761 aa34.7■■■■□ 3.15
FMR1-219ENST00000621453 UBR2Q8IWV8 1755 aa34.7■■■■□ 3.15
FMR1-219ENST00000621453 PAPPAQ13219 1627 aa34.7■■■■□ 3.14
FMR1-219ENST00000621453 UBTFL1P0CB47 393 aaPredicted RBP34.69■■■■□ 3.14
FMR1-219ENST00000621453 IPO9Q96P70 1041 aaKnown RBP34.69■■■■□ 3.14
FMR1-219ENST00000621453 MAP3K2Q9Y2U5 619 aa34.69■■■■□ 3.14
FMR1-219ENST00000621453 DDX58O95786 925 aaKnown RBP34.68■■■■□ 3.14
FMR1-219ENST00000621453 TOGARAM1Q9Y4F4 1720 aa34.68■■■■□ 3.14
FMR1-219ENST00000621453 USP16Q9Y5T5 823 aa34.68■■■■□ 3.14
FMR1-219ENST00000621453 LRRFIP2Q9Y608 721 aaKnown RBP34.67■■■■□ 3.14
FMR1-219ENST00000621453 ATP8B2P98198 1209 aa34.66■■■■□ 3.14
FMR1-219ENST00000621453 WNK3Q9BYP7 1800 aa34.66■■■■□ 3.14
FMR1-219ENST00000621453 ADAMTS2O95450 1211 aa34.65■■■■□ 3.14
FMR1-219ENST00000621453 ZBTB47Q9UFB7 747 aaPredicted RBP34.65■■■■□ 3.14
FMR1-219ENST00000621453 NRAPQ86VF7 1730 aa34.64■■■■□ 3.14
FMR1-219ENST00000621453 MYL6BP14649 208 aa34.63■■■■□ 3.13
FMR1-219ENST00000621453 AIMP1Q12904 312 aaKnown RBP34.63■■■■□ 3.13
FMR1-219ENST00000621453 KCPQ6ZWJ8 1503 aa34.62■■■■□ 3.13
FMR1-219ENST00000621453 ALDH1L1O75891 902 aa34.62■■■■□ 3.13
FMR1-219ENST00000621453 SEC24BO95487 1268 aa34.61■■■■□ 3.13
FMR1-219ENST00000621453 PNMA6EA0A0J9YXQ4 647 aa34.6■■■■□ 3.13
FMR1-219ENST00000621453 UBAP1LF5GYI3 381 aa34.59■■■■□ 3.13
FMR1-219ENST00000621453 NBPF7P0C2Y1 421 aaPredicted RBP34.59■■■■□ 3.13
FMR1-219ENST00000621453 TNS2Q63HR2 1409 aa34.59■■■■□ 3.13
FMR1-219ENST00000621453 BMP2KLQ5H9B9 411 aa34.58■■■■□ 3.13
FMR1-219ENST00000621453 LRP10Q7Z4F1 713 aa34.58■■■■□ 3.13
FMR1-219ENST00000621453 XAGE3Q8WTP9 111 aa34.58■■■■□ 3.13
FMR1-219ENST00000621453 TMOD3Q9NYL9 352 aa34.58■■■■□ 3.13
FMR1-219ENST00000621453 COPS6Q7L5N1 327 aa34.57■■■■□ 3.12
FMR1-219ENST00000621453 RIC3Q7Z5B4 369 aa34.57■■■■□ 3.12
FMR1-219ENST00000621453 LINS1Q8NG48 757 aa34.57■■■■□ 3.12
FMR1-219ENST00000621453 NUTM2BA6NNL0 878 aaPredicted RBP34.56■■■■□ 3.12
FMR1-219ENST00000621453 NUTM2EB1AL46 878 aaPredicted RBP34.56■■■■□ 3.12
FMR1-219ENST00000621453 NUTM2AQ8IVF1 878 aaPredicted RBP34.56■■■■□ 3.12
FMR1-219ENST00000621453 ERBB4Q15303 1308 aa34.56■■■■□ 3.12
FMR1-219ENST00000621453 ITGB4P16144 1822 aa34.55■■■■□ 3.12
FMR1-219ENST00000621453 EXOC5O00471 708 aa34.55■■■■□ 3.12
FMR1-219ENST00000621453 PLEKHM2Q8IWE5 1019 aa34.55■■■■□ 3.12
FMR1-219ENST00000621453 NWD2Q9ULI1 1742 aa34.55■■■■□ 3.12
FMR1-219ENST00000621453 APBB1O00213 710 aa34.54■■■■□ 3.12
FMR1-219ENST00000621453 CWF19L2Q2TBE0 894 aaKnown RBP34.54■■■■□ 3.12
FMR1-219ENST00000621453 LRP6O75581 1613 aa34.53■■■■□ 3.12
FMR1-219ENST00000621453 SMARCA5O60264 1052 aaPredicted RBP34.53■■■■□ 3.12
FMR1-219ENST00000621453 SSH3Q8TE77 659 aa34.53■■■■□ 3.12
FMR1-219ENST00000621453 C9orf78Q9NZ63 289 aaPredicted RBP34.53■■■■□ 3.12
FMR1-219ENST00000621453 EXOC6BQ9Y2D4 811 aa34.53■■■■□ 3.12
FMR1-219ENST00000621453 SPATA31A1Q5TZJ5 1347 aa34.53■■■■□ 3.12
FMR1-219ENST00000621453 PIP4K2AP48426 406 aaPredicted RBP34.52■■■■□ 3.12
FMR1-219ENST00000621453 CDCA7Q9BWT1 371 aaPredicted RBP34.52■■■■□ 3.12
FMR1-219ENST00000621453 THRAP3Q9Y2W1 955 aaKnown RBP34.52■■■■□ 3.12
FMR1-219ENST00000621453 PTCD1O75127 700 aaKnown RBP34.52■■■■□ 3.12
FMR1-219ENST00000621453 C16orf71Q8IYS4 520 aaPredicted RBP34.52■■■■□ 3.12
FMR1-219ENST00000621453 DDRGK1Q96HY6 314 aa34.52■■■■□ 3.12
FMR1-219ENST00000621453 UPF2Q9HAU5 1272 aaKnown RBP34.51■■■■□ 3.12
FMR1-219ENST00000621453 NEXNQ0ZGT2 675 aa34.5■■■■□ 3.11
FMR1-219ENST00000621453 ANKRD13DQ6ZTN6 518 aa34.5■■■■□ 3.11
FMR1-219ENST00000621453 PPP1R42Q7Z4L9 355 aa34.5■■■■□ 3.11
FMR1-219ENST00000621453 HDAC5Q9UQL6 1122 aa34.5■■■■□ 3.11
FMR1-219ENST00000621453 IBTKQ9P2D0 1353 aaPredicted RBP34.5■■■■□ 3.11
FMR1-219ENST00000621453 SLIT2O94813 1529 aa34.49■■■■□ 3.11
FMR1-219ENST00000621453 POLA2Q14181 598 aa34.49■■■■□ 3.11
FMR1-219ENST00000621453 PIGBQ92521 554 aa34.49■■■■□ 3.11
FMR1-219ENST00000621453 METTL22Q9BUU2 404 aaPredicted RBP34.49■■■■□ 3.11
FMR1-219ENST00000621453 NOP58Q9Y2X3 529 aaKnown RBP34.49■■■■□ 3.11
FMR1-219ENST00000621453 BCL11AQ9H165 835 aa34.48■■■■□ 3.11
FMR1-219ENST00000621453 ARFGEF2Q9Y6D5 1785 aa34.48■■■■□ 3.11
FMR1-219ENST00000621453 UTYO14607 1347 aa34.47■■■■□ 3.11
FMR1-219ENST00000621453 IGKV5-2P06315 115 aa34.47■■■■□ 3.11
FMR1-219ENST00000621453 LRRCC1Q9C099 1032 aa34.47■■■■□ 3.11
FMR1-219ENST00000621453 GRM8O00222 908 aa34.46■■■■□ 3.11
FMR1-219ENST00000621453 NBPF26B4DH59 902 aa34.46■■■■□ 3.11
FMR1-219ENST00000621453 SRGAP3O43295 1099 aa34.46■■■■□ 3.11
FMR1-219ENST00000621453 NBPF14Q5TI25 921 aa34.46■■■■□ 3.11
FMR1-219ENST00000621453 NBPF10Q6P3W6 841 aaKnown RBP34.46■■■■□ 3.11
FMR1-219ENST00000621453 NBPF15Q8N660 670 aa34.46■■■■□ 3.11
FMR1-219ENST00000621453 OTUD7AQ8TE49 926 aaPredicted RBP34.46■■■■□ 3.11
FMR1-219ENST00000621453 MYD88Q99836 296 aa34.45■■■■□ 3.11
FMR1-219ENST00000621453 NEURL1BA8MQ27 555 aa34.44■■■■□ 3.1
FMR1-219ENST00000621453 ASAP1Q9ULH1 1129 aa34.44■■■■□ 3.1
FMR1-219ENST00000621453 SPATA31A5Q5VU36 1347 aa34.44■■■■□ 3.1
FMR1-219ENST00000621453 SPATA31A7Q8IWB4 1347 aa34.44■■■■□ 3.1
FMR1-219ENST00000621453 GSPT1P15170 499 aaKnown RBP34.44■■■■□ 3.1
FMR1-219ENST00000621453 MTX1Q13505 466 aa34.44■■■■□ 3.1
FMR1-219ENST00000621453 TTC22Q5TAA0 569 aa34.44■■■■□ 3.1
FMR1-219ENST00000621453 BCL9O00512 1426 aa34.43■■■■□ 3.1
FMR1-219ENST00000621453 KAT6BQ8WYB5 2073 aa34.43■■■■□ 3.1
FMR1-219ENST00000621453 ERICH6Q7L0X2 663 aa34.42■■■■□ 3.1
FMR1-219ENST00000621453 PLBD2Q8NHP8 589 aa34.42■■■■□ 3.1
FMR1-219ENST00000621453 ATG3Q9NT62 314 aa34.42■■■■□ 3.1
FMR1-219ENST00000621453 AFDNP55196 1824 aaKnown RBP34.42■■■■□ 3.1
FMR1-219ENST00000621453 JCADQ9P266 1359 aa34.42■■■■□ 3.1
FMR1-219ENST00000621453 VSIG10Q8N0Z9 540 aa34.41■■■■□ 3.1
FMR1-219ENST00000621453 A1BGP04217 495 aa34.41■■■■□ 3.1
FMR1-219ENST00000621453 DDB1Q16531 1140 aa34.41■■■■□ 3.1
FMR1-219ENST00000621453 RAB11FIP3O75154 756 aa34.4■■■■□ 3.1
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms