RNA–Protein interactions for RNA: ENST00000621271.4

CLTCL1-211, Transcript of clathrin heavy chain like 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLTCL1, Length 5,313 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLTCL1-211ENST00000621271 PLCH2O75038 1416 aa11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 CCDC196A0A1B0GTZ2 297 aa11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 RAB11FIP3O75154 756 aa11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 NUTM1Q86Y26 1132 aa11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 JAKMIP1Q96N16 626 aaKnown RBP11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 RNF41Q9H4P4 317 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 CWC25Q9NXE8 425 aaPredicted RBP11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 ACEP12821 1306 aa11.49□□□□□ -0.57
CLTCL1-211ENST00000621271 PPP1R12BO60237 982 aaPredicted RBP11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 GLRX3O76003 335 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 JDP2Q8WYK2 163 aa11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 DEF6Q9H4E7 631 aa11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 PDRG1Q9NUG6 133 aa11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 PARP3Q9Y6F1 533 aa11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 SNRPA1P09661 255 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 SETQ01105 290 aaPredicted RBP11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 LARP1BQ659C4 914 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 ADGRF5Q8IZF2 1346 aa11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 ACBD3Q9H3P7 528 aa11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 EXOC6BQ9Y2D4 811 aa11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 PPM1FP49593 454 aaPredicted RBP11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 CCDC152Q4G0S7 254 aa11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 SEPT11Q9NVA2 429 aaKnown RBP11.48□□□□□ -0.57
CLTCL1-211ENST00000621271 MBD3O95983 291 aa11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 TRIM5Q9C035 493 aa11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 RAPGEF6Q8TEU7 1601 aa11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 C19orf44Q9H6X5 657 aa11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 POTEJP0CG39 1038 aa11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 TXLNBQ8N3L3 684 aa11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 ZSCAN31Q96LW9 406 aaPredicted RBP11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 DHX29Q7Z478 1369 aaKnown RBP11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 NLRP3Q96P20 1036 aa11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 CEP131Q9UPN4 1083 aa11.47□□□□□ -0.57
CLTCL1-211ENST00000621271 CHD1LQ86WJ1 897 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 BOLA2Q9H3K6 86 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 CAMSAP2Q08AD1 1489 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 CEP57L1Q8IYX8 460 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 GRPEL1Q9HAV7 217 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 DISP1Q96F81 1524 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 RIMBP3CA6NJZ7 1639 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 RIMBP3BA6NNM3 1639 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 RIMBP3Q9UFD9 1639 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 KRT85P78386 507 aa11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 NOM1Q5C9Z4 860 aaKnown RBP11.46□□□□□ -0.57
CLTCL1-211ENST00000621271 SERPINC1P01008 464 aa11.46□□□□□ -0.58
CLTCL1-211ENST00000621271 RAB34Q9BZG1 259 aa11.46□□□□□ -0.58
CLTCL1-211ENST00000621271 RRP9O43818 475 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 GSTO1P78417 241 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 CAVIN1Q6NZI2 390 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 ARGLU1Q9NWB6 273 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 STK32BQ9NY57 414 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 ABCC10Q5T3U5 1492 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 VTI1AQ96AJ9 217 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 RTCBQ9Y3I0 505 aaKnown RBP11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 LMOD1P29536 600 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 TTF1Q15361 905 aaPredicted RBP11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 PPFIBP1Q86W92 1011 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 WWC3Q9ULE0 1092 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 NEO1Q92859 1461 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 ANKRD18AQ8IVF6 992 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 ATP5J2-PTCD1G3V325 749 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 DRC1Q96MC2 740 aa11.45□□□□□ -0.58
CLTCL1-211ENST00000621271 NOS1P29475 1434 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 WDR33Q9C0J8 1336 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 HSP90B2PQ58FF3 399 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 ABCC11Q96J66 1382 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 ZNF213O14771 459 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 MCM4P33991 863 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 PDE4BQ07343 736 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 CFAP45Q9UL16 551 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 ESPNB1AK53 854 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 IL2RBP14784 551 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 MX1P20591 662 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 HMGN5P82970 282 aaKnown RBP11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 TMEM266Q2M3C6 531 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 CCDC181Q5TID7 509 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 ZNF518AQ6AHZ1 1483 aa11.44□□□□□ -0.58
CLTCL1-211ENST00000621271 TTC21AQ8NDW8 1320 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 ERLIN2O94905 339 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 NEFHP12036 1026 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 RNF214Q8ND24 703 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 MAP3K2Q9Y2U5 619 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 NCKAP5LQ9HCH0 1330 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 TEX35Q5T0J7 233 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 NYXQ9GZU5 481 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 C14orf93Q9H972 538 aaKnown RBP11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 TPTE2Q6XPS3 522 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 UBE3BQ7Z3V4 1068 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 CCDC97Q96F63 343 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 CCDC8Q9H0W5 538 aaPredicted RBP11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 SLC12A7Q9Y666 1083 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 CATIPQ7Z7H3 387 aa11.43□□□□□ -0.58
CLTCL1-211ENST00000621271 CLASP1Q7Z460 1538 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 CTTNBP2Q8WZ74 1663 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 CCP110O43303 1012 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 TMEM57Q8N5G2 664 aa11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 NUP153P49790 1475 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 ZGPATQ8N5A5 531 aaKnown RBP11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 NIP7Q9Y221 180 aaKnown RBP eCLIP11.42□□□□□ -0.58
CLTCL1-211ENST00000621271 CCDC194A0A1B0GVG4 234 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms