RNA–Protein interactions for RNA: ENST00000621152.4

SMC6-210, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 3

Gene SMC6, Length 500 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-210ENST00000621152 HEG1Q9ULI3 1381 aa27.29■■□□□ 1.96
SMC6-210ENST00000621152 CICQ96RK0 1608 aaPredicted RBP27.28■■□□□ 1.96
SMC6-210ENST00000621152 NEFMP07197 916 aa27.28■■□□□ 1.96
SMC6-210ENST00000621152 DDR1Q08345 913 aa27.28■■□□□ 1.96
SMC6-210ENST00000621152 DCTN1Q14203 1278 aa27.28■■□□□ 1.96
SMC6-210ENST00000621152 UTRNP46939 3433 aa27.28■■□□□ 1.96
SMC6-210ENST00000621152 HTATSF1O43719 755 aaKnown RBP27.27■■□□□ 1.96
SMC6-210ENST00000621152 DPEP1P16444 411 aa27.27■■□□□ 1.96
SMC6-210ENST00000621152 COL15A1P39059 1388 aa27.25■■□□□ 1.95
SMC6-210ENST00000621152 EIF5P55010 431 aaKnown RBP27.25■■□□□ 1.95
SMC6-210ENST00000621152 RALBP1Q15311 655 aa27.25■■□□□ 1.95
SMC6-210ENST00000621152 C4AP0C0L4 1744 aa27.24■■□□□ 1.95
SMC6-210ENST00000621152 BCS1LQ9Y276 419 aa27.24■■□□□ 1.95
SMC6-210ENST00000621152 C10orf71Q711Q0 1435 aa27.24■■□□□ 1.95
SMC6-210ENST00000621152 A0A087WZG4 1122 aa27.23■■□□□ 1.95
SMC6-210ENST00000621152 POLRMTO00411 1230 aaKnown RBP27.23■■□□□ 1.95
SMC6-210ENST00000621152 A1BGP04217 495 aa27.23■■□□□ 1.95
SMC6-210ENST00000621152 BCL2L12Q9HB09 334 aa27.23■■□□□ 1.95
SMC6-210ENST00000621152 PXDNLA1KZ92 1463 aa27.23■■□□□ 1.95
SMC6-210ENST00000621152 NFIXQ14938 502 aa27.22■■□□□ 1.95
SMC6-210ENST00000621152 PLEKHF1Q96S99 279 aa27.22■■□□□ 1.95
SMC6-210ENST00000621152 PNNQ9H307 717 aaKnown RBP27.22■■□□□ 1.95
SMC6-210ENST00000621152 ZNF330Q9Y3S2 320 aaPredicted RBP27.22■■□□□ 1.95
SMC6-210ENST00000621152 TAF7Q15545 349 aaPredicted RBP27.21■■□□□ 1.95
SMC6-210ENST00000621152 USP16Q9Y5T5 823 aa27.21■■□□□ 1.95
SMC6-210ENST00000621152 UBR2Q8IWV8 1755 aa27.2■■□□□ 1.95
SMC6-210ENST00000621152 KCNA3P22001 575 aa27.2■■□□□ 1.94
SMC6-210ENST00000621152 IL6STP40189 918 aaPredicted RBP27.19■■□□□ 1.94
SMC6-210ENST00000621152 NPM2Q86SE8 214 aaKnown RBP27.19■■□□□ 1.94
SMC6-210ENST00000621152 MIS18AQ9NYP9 233 aa27.19■■□□□ 1.94
SMC6-210ENST00000621152 TBC1D2BQ9UPU7 963 aa27.19■■□□□ 1.94
SMC6-210ENST00000621152 SIPA1L3O60292 1781 aaPredicted RBP27.18■■□□□ 1.94
SMC6-210ENST00000621152 SNRPA1P09661 255 aaKnown RBP27.18■■□□□ 1.94
SMC6-210ENST00000621152 BICDL1Q6ZP65 573 aa27.18■■□□□ 1.94
SMC6-210ENST00000621152 PIM2Q9P1W9 311 aa27.18■■□□□ 1.94
SMC6-210ENST00000621152 PRAMEF22A3QJZ6 481 aa27.17■■□□□ 1.94
SMC6-210ENST00000621152 SERPINB2P05120 415 aa27.17■■□□□ 1.94
SMC6-210ENST00000621152 ARHGAP27Q6ZUM4 889 aa27.17■■□□□ 1.94
SMC6-210ENST00000621152 NFE2L2Q16236 605 aa27.16■■□□□ 1.94
SMC6-210ENST00000621152 GOLGB1Q14789 3259 aaKnown RBP27.16■■□□□ 1.94
SMC6-210ENST00000621152 KIF13BQ9NQT8 1826 aa27.16■■□□□ 1.94
SMC6-210ENST00000621152 CHRNA5P30532 468 aa27.15■■□□□ 1.94
SMC6-210ENST00000621152 MAPK8IP3Q9UPT6 1336 aa27.15■■□□□ 1.94
SMC6-210ENST00000621152 N4BP2Q86UW6 1770 aaPredicted RBP27.14■■□□□ 1.94
SMC6-210ENST00000621152 PIP4K2AP48426 406 aaPredicted RBP27.13■■□□□ 1.93
SMC6-210ENST00000621152 DALRD3Q5D0E6 543 aaKnown RBP27.13■■□□□ 1.93
SMC6-210ENST00000621152 TBC1D9BQ66K14 1250 aa27.12■■□□□ 1.93
SMC6-210ENST00000621152 PNISRQ8TF01 805 aaKnown RBP27.11■■□□□ 1.93
SMC6-210ENST00000621152 THUMPD2Q9BTF0 503 aaKnown RBP27.11■■□□□ 1.93
SMC6-210ENST00000621152 KIAA1551Q9HCM1 1747 aa27.1■■□□□ 1.93
SMC6-210ENST00000621152 ATP10DQ9P241 1426 aa27.1■■□□□ 1.93
SMC6-210ENST00000621152 GIGYF1O75420 1035 aaPredicted RBP27.1■■□□□ 1.93
SMC6-210ENST00000621152 MYBBP1AQ9BQG0 1328 aaKnown RBP27.1■■□□□ 1.93
SMC6-210ENST00000621152 C1QTNF8P60827 252 aa27.09■■□□□ 1.93
SMC6-210ENST00000621152 DZIP3Q86Y13 1208 aaKnown RBP27.09■■□□□ 1.93
SMC6-210ENST00000621152 CAMTA2O94983 1202 aa27.08■■□□□ 1.93
SMC6-210ENST00000621152 ZNF526Q8TF50 670 aaPredicted RBP27.08■■□□□ 1.93
SMC6-210ENST00000621152 RIPK4P57078 832 aa27.07■■□□□ 1.92
SMC6-210ENST00000621152 SETDB2Q96T68 719 aa27.07■■□□□ 1.92
SMC6-210ENST00000621152 GPBP1L1Q9HC44 474 aaPredicted RBP27.07■■□□□ 1.92
SMC6-210ENST00000621152 NBPF26B4DH59 902 aa27.06■■□□□ 1.92
SMC6-210ENST00000621152 NBPF10Q6P3W6 841 aaKnown RBP27.06■■□□□ 1.92
SMC6-210ENST00000621152 NBPF15Q8N660 670 aa27.06■■□□□ 1.92
SMC6-210ENST00000621152 C2CD5Q86YS7 1000 aa27.05■■□□□ 1.92
SMC6-210ENST00000621152 H0YIN7 160 aa27.04■■□□□ 1.92
SMC6-210ENST00000621152 ADCY9O60503 1353 aa27.03■■□□□ 1.92
SMC6-210ENST00000621152 EIF4A1P60842 406 aaKnown RBP27.03■■□□□ 1.92
SMC6-210ENST00000621152 CCDC24Q8N4L8 307 aa27.03■■□□□ 1.92
SMC6-210ENST00000621152 TMPOP42166 694 aaKnown RBP27.02■■□□□ 1.92
SMC6-210ENST00000621152 PRR5LQ6MZQ0 368 aa27.01■■□□□ 1.91
SMC6-210ENST00000621152 CLEC4GQ6UXB4 293 aa27.01■■□□□ 1.91
SMC6-210ENST00000621152 CCDC146Q8IYE0 955 aa27.01■■□□□ 1.91
SMC6-210ENST00000621152 NPHP1O15259 732 aa27■■□□□ 1.91
SMC6-210ENST00000621152 WDR43Q15061 677 aaKnown RBP eCLIP27■■□□□ 1.91
SMC6-210ENST00000621152 TTLL6Q8N841 843 aa27■■□□□ 1.91
SMC6-210ENST00000621152 BRIP1Q9BX63 1249 aa27■■□□□ 1.91
SMC6-210ENST00000621152 AFDNP55196 1824 aaKnown RBP27■■□□□ 1.91
SMC6-210ENST00000621152 CARMIL3Q8ND23 1372 aa26.99■■□□□ 1.91
SMC6-210ENST00000621152 DLG5Q8TDM6 1919 aa26.99■■□□□ 1.91
SMC6-210ENST00000621152 PDE6BP35913 854 aa26.99■■□□□ 1.91
SMC6-210ENST00000621152 NEUROD2Q15784 382 aa26.99■■□□□ 1.91
SMC6-210ENST00000621152 C9orf131Q5VYM1 1079 aa26.99■■□□□ 1.91
SMC6-210ENST00000621152 NGEFQ8N5V2 710 aa26.99■■□□□ 1.91
SMC6-210ENST00000621152 PRKRIP1Q9H875 184 aaPredicted RBP26.99■■□□□ 1.91
SMC6-210ENST00000621152 ZNF652Q9Y2D9 606 aa26.99■■□□□ 1.91
SMC6-210ENST00000621152 RRP7AQ9Y3A4 280 aaKnown RBP26.99■■□□□ 1.91
SMC6-210ENST00000621152 TSPYL4Q9UJ04 414 aa26.98■■□□□ 1.91
SMC6-210ENST00000621152 NRXN2Q9P2S2 1712 aa26.97■■□□□ 1.91
SMC6-210ENST00000621152 CNBD1Q8NA66 436 aa26.97■■□□□ 1.91
SMC6-210ENST00000621152 ZNF622Q969S3 477 aaKnown RBP eCLIP26.97■■□□□ 1.911e-8■■■□□ 16.4
SMC6-210ENST00000621152 ADAMTS8Q9UP79 889 aa26.97■■□□□ 1.91
SMC6-210ENST00000621152 PDZRN3Q9UPQ7 1066 aa26.97■■□□□ 1.91
SMC6-210ENST00000621152 BRCA1P38398 1863 aaKnown RBP26.97■■□□□ 1.91
SMC6-210ENST00000621152 LMOD3Q0VAK6 560 aa26.96■■□□□ 1.91
SMC6-210ENST00000621152 RUNDC1Q96C34 613 aa26.96■■□□□ 1.91
SMC6-210ENST00000621152 ZEB1P37275 1124 aaPredicted RBP26.95■■□□□ 1.9
SMC6-210ENST00000621152 SENP3-EIF4A1A0A087X0R7 540 aa26.94■■□□□ 1.9
SMC6-210ENST00000621152 ST5P78524 1137 aa26.94■■□□□ 1.9
SMC6-210ENST00000621152 NBPF5PQ86XG9 351 aaPredicted RBP26.94■■□□□ 1.9
SMC6-210ENST00000621152 HLFQ16534 295 aa26.93■■□□□ 1.9
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms