RNA–Protein interactions for RNA: ENST00000619178.1

SNORD3D-201, Transcript of small nucleolar RNA, C/D box 3D, humanhuman

BASIC

Gene SNORD3D, Length 218 nt, Biotype snoRNA, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD3D-201ENST00000619178 ATP6V1AP38606 617 aa14.11□□□□□ -0.15
SNORD3D-201ENST00000619178 SIK1P57059 783 aa14.11□□□□□ -0.15
SNORD3D-201ENST00000619178 SLC27A3Q5K4L6 730 aa14.11□□□□□ -0.15
SNORD3D-201ENST00000619178 ARFGEF2Q9Y6D5 1785 aa14.11□□□□□ -0.15
SNORD3D-201ENST00000619178 QSER1Q2KHR3 1735 aa14.1□□□□□ -0.15
SNORD3D-201ENST00000619178 PLSCR1O15162 318 aa14.1□□□□□ -0.15
SNORD3D-201ENST00000619178 EIF2S2P20042 333 aaKnown RBP14.1□□□□□ -0.15
SNORD3D-201ENST00000619178 RARSP54136 660 aaKnown RBP14.1□□□□□ -0.15
SNORD3D-201ENST00000619178 BRPF1P55201 1214 aaPredicted RBP14.1□□□□□ -0.15
SNORD3D-201ENST00000619178 TSPYL6Q8N831 410 aa14.1□□□□□ -0.15
SNORD3D-201ENST00000619178 HYPKQ9NX55 129 aa14.1□□□□□ -0.15
SNORD3D-201ENST00000619178 UBR3Q6ZT12 1888 aa14.1□□□□□ -0.15
SNORD3D-201ENST00000619178 APBA3O96018 575 aa14.09□□□□□ -0.15
SNORD3D-201ENST00000619178 NEFLP07196 543 aa14.09□□□□□ -0.15
SNORD3D-201ENST00000619178 BAG6P46379 1132 aa14.09□□□□□ -0.15
SNORD3D-201ENST00000619178 CCNL1Q9UK58 526 aaPredicted RBP14.09□□□□□ -0.15
SNORD3D-201ENST00000619178 PTPRCP08575 1304 aa14.09□□□□□ -0.15
SNORD3D-201ENST00000619178 DDX58O95786 925 aaKnown RBP14.08□□□□□ -0.16
SNORD3D-201ENST00000619178 KRT24Q2M2I5 525 aa14.08□□□□□ -0.16
SNORD3D-201ENST00000619178 DDX21Q9NR30 783 aaKnown RBP eCLIP14.08□□□□□ -0.168e-7■■■■■ 27.9
SNORD3D-201ENST00000619178 NUP188Q5SRE5 1749 aa14.07□□□□□ -0.16
SNORD3D-201ENST00000619178 BCORQ6W2J9 1755 aa14.07□□□□□ -0.16
SNORD3D-201ENST00000619178 SLC4A2P04920 1241 aa14.07□□□□□ -0.16
SNORD3D-201ENST00000619178 SSH1Q8WYL5 1049 aa14.07□□□□□ -0.16
SNORD3D-201ENST00000619178 ARHGAP45Q92619 1136 aa14.07□□□□□ -0.16
SNORD3D-201ENST00000619178 ZKSCAN2Q63HK3 967 aa14.06□□□□□ -0.16
SNORD3D-201ENST00000619178 DNAJC10Q8IXB1 793 aa14.06□□□□□ -0.16
SNORD3D-201ENST00000619178 API5Q9BZZ5 524 aaKnown RBP14.06□□□□□ -0.16
SNORD3D-201ENST00000619178 C4AP0C0L4 1744 aa14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 RC3H1Q5TC82 1133 aaKnown RBP14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 NECTIN2Q92692 538 aa14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 FRAT1Q92837 279 aaPredicted RBP14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 CHMP4BQ9H444 224 aaKnown RBP14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 CCDC87Q9NVE4 849 aa14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 CHPF2Q9P2E5 772 aa14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 USP16Q9Y5T5 823 aa14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 TUBGCP6Q96RT7 1819 aa14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 CNTNAP4Q9C0A0 1308 aa14.05□□□□□ -0.16
SNORD3D-201ENST00000619178 CYP19A1P11511 503 aaPredicted RBP14.04□□□□□ -0.16
SNORD3D-201ENST00000619178 IL6STP40189 918 aaPredicted RBP14.04□□□□□ -0.16
SNORD3D-201ENST00000619178 FTSJ3Q8IY81 847 aaKnown RBP14.04□□□□□ -0.16
SNORD3D-201ENST00000619178 MRPL50Q8N5N7 158 aaKnown RBP14.04□□□□□ -0.16
SNORD3D-201ENST00000619178 SUPT16HQ9Y5B9 1047 aaKnown RBP14.04□□□□□ -0.16
SNORD3D-201ENST00000619178 A0A087WZG4 1122 aa14.03□□□□□ -0.16
SNORD3D-201ENST00000619178 BCAR3O75815 825 aa14.03□□□□□ -0.16
SNORD3D-201ENST00000619178 RRP1P56182 461 aaKnown RBP14.03□□□□□ -0.16
SNORD3D-201ENST00000619178 FKBP5Q13451 457 aaPredicted RBP14.03□□□□□ -0.16
SNORD3D-201ENST00000619178 TXNRD1Q16881 649 aa14.03□□□□□ -0.16
SNORD3D-201ENST00000619178 BCL2L13Q9BXK5 485 aa14.03□□□□□ -0.16
SNORD3D-201ENST00000619178 PXDNLA1KZ92 1463 aa14.03□□□□□ -0.16
SNORD3D-201ENST00000619178 SCN7AQ01118 1682 aa14.03□□□□□ -0.16
SNORD3D-201ENST00000619178 MYH3P11055 1940 aa14.02□□□□□ -0.16
SNORD3D-201ENST00000619178 MYL6BP14649 208 aa14.02□□□□□ -0.17
SNORD3D-201ENST00000619178 CRKLP46109 303 aaKnown RBP14.02□□□□□ -0.17
SNORD3D-201ENST00000619178 FLIIQ13045 1269 aa14.02□□□□□ -0.17
SNORD3D-201ENST00000619178 PDE3AQ14432 1141 aa14.02□□□□□ -0.17
SNORD3D-201ENST00000619178 ATF7IPQ6VMQ6 1270 aa14.02□□□□□ -0.17
SNORD3D-201ENST00000619178 KIF6Q6ZMV9 814 aa14.02□□□□□ -0.17
SNORD3D-201ENST00000619178 AK7Q96M32 723 aa14.02□□□□□ -0.17
SNORD3D-201ENST00000619178 PRAMEF22A3QJZ6 481 aa14.01□□□□□ -0.17
SNORD3D-201ENST00000619178 PTF1AQ7RTS3 328 aa14.01□□□□□ -0.17
SNORD3D-201ENST00000619178 NOB1Q9ULX3 412 aaKnown RBP14.01□□□□□ -0.17
SNORD3D-201ENST00000619178 RNF123Q5XPI4 1314 aa14□□□□□ -0.17
SNORD3D-201ENST00000619178 TCERG1O14776 1098 aaKnown RBP14□□□□□ -0.17
SNORD3D-201ENST00000619178 A1BGP04217 495 aa14□□□□□ -0.17
SNORD3D-201ENST00000619178 ADRA2BP18089 450 aa14□□□□□ -0.17
SNORD3D-201ENST00000619178 NEXNQ0ZGT2 675 aa14□□□□□ -0.17
SNORD3D-201ENST00000619178 ITPK1Q13572 414 aa14□□□□□ -0.17
SNORD3D-201ENST00000619178 DZIP1LQ8IYY4 767 aaKnown RBP14□□□□□ -0.17
SNORD3D-201ENST00000619178 FLAD1Q8NFF5 587 aa14□□□□□ -0.17
SNORD3D-201ENST00000619178 SLC4A9Q96Q91 983 aa14□□□□□ -0.17
SNORD3D-201ENST00000619178 RTCBQ9Y3I0 505 aaKnown RBP14□□□□□ -0.17
SNORD3D-201ENST00000619178 EP400Q96L91 3159 aa13.99□□□□□ -0.17
SNORD3D-201ENST00000619178 RGL2O15211 777 aa13.99□□□□□ -0.17
SNORD3D-201ENST00000619178 ANKRD13DQ6ZTN6 518 aa13.99□□□□□ -0.17
SNORD3D-201ENST00000619178 RIC3Q7Z5B4 369 aa13.99□□□□□ -0.17
SNORD3D-201ENST00000619178 ZNF652Q9Y2D9 606 aa13.99□□□□□ -0.17
SNORD3D-201ENST00000619178 ZNF330Q9Y3S2 320 aaPredicted RBP13.99□□□□□ -0.17
SNORD3D-201ENST00000619178 COL15A1P39059 1388 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 RPS6KA4O75676 772 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 CCT4P50991 539 aaKnown RBP13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 AAMPQ13685 434 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 HSP90AB3PQ58FF7 597 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 KSR2Q6VAB6 950 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 COPS6Q7L5N1 327 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 LINC00116Q8NCU8 138 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 PLBD2Q8NHP8 589 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 HDAC5Q9UQL6 1122 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 ZBTB1Q9Y2K1 713 aa13.98□□□□□ -0.17
SNORD3D-201ENST00000619178 GNPATO15228 680 aa13.97□□□□□ -0.17
SNORD3D-201ENST00000619178 SSFA2P28290 1259 aa13.97□□□□□ -0.17
SNORD3D-201ENST00000619178 AIMP1Q12904 312 aaKnown RBP13.97□□□□□ -0.17
SNORD3D-201ENST00000619178 PDIA6Q15084 440 aa13.97□□□□□ -0.17
SNORD3D-201ENST00000619178 NBPF14Q5TI25 921 aa13.97□□□□□ -0.17
SNORD3D-201ENST00000619178 INTS5Q6P9B9 1019 aaKnown RBP13.97□□□□□ -0.17
SNORD3D-201ENST00000619178 XAGE3Q8WTP9 111 aa13.97□□□□□ -0.17
SNORD3D-201ENST00000619178 ARXQ96QS3 562 aa13.97□□□□□ -0.17
SNORD3D-201ENST00000619178 PHAXQ9H814 394 aaKnown RBP13.97□□□□□ -0.17
SNORD3D-201ENST00000619178 NBPF26B4DH59 902 aa13.96□□□□□ -0.17
SNORD3D-201ENST00000619178 ERVV-1B6SEH8 477 aa13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms