RNA–Protein interactions for RNA: ENST00000617293.4

SUSD3-205, Transcript of sushi domain containing 3, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SUSD3, Length 1,076 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUSD3-205ENST00000617293 ADRA2BP18089 450 aa24.77■■□□□ 1.56
SUSD3-205ENST00000617293 ARXQ96QS3 562 aa24.77■■□□□ 1.56
SUSD3-205ENST00000617293 RFC4P35249 363 aa24.76■■□□□ 1.55
SUSD3-205ENST00000617293 TRIM35Q9UPQ4 493 aa24.76■■□□□ 1.55
SUSD3-205ENST00000617293 ZBTB1Q9Y2K1 713 aa24.75■■□□□ 1.55
SUSD3-205ENST00000617293 CANXP27824 592 aaKnown RBP24.74■■□□□ 1.55
SUSD3-205ENST00000617293 COL24A1Q17RW2 1714 aa24.73■■□□□ 1.55
SUSD3-205ENST00000617293 PRAMEF22A3QJZ6 481 aa24.73■■□□□ 1.55
SUSD3-205ENST00000617293 SNRPA1P09661 255 aaKnown RBP24.73■■□□□ 1.55
SUSD3-205ENST00000617293 TSPYL4Q9UJ04 414 aa24.73■■□□□ 1.55
SUSD3-205ENST00000617293 USP16Q9Y5T5 823 aa24.73■■□□□ 1.55
SUSD3-205ENST00000617293 SOS1Q07889 1333 aaPredicted RBP24.71■■□□□ 1.55
SUSD3-205ENST00000617293 KDM3BQ7LBC6 1761 aa24.71■■□□□ 1.55
SUSD3-205ENST00000617293 A1BGP04217 495 aa24.7■■□□□ 1.54
SUSD3-205ENST00000617293 KLHL34Q8N239 644 aa24.7■■□□□ 1.54
SUSD3-205ENST00000617293 FHDC1Q9C0D6 1143 aaPredicted RBP24.7■■□□□ 1.54
SUSD3-205ENST00000617293 LAS1LQ9Y4W2 734 aaKnown RBP24.7■■□□□ 1.54
SUSD3-205ENST00000617293 SENP3-EIF4A1A0A087X0R7 540 aa24.69■■□□□ 1.54
SUSD3-205ENST00000617293 EIF4A1P60842 406 aaKnown RBP24.69■■□□□ 1.54
SUSD3-205ENST00000617293 FAM9BQ8IZU0 186 aa24.69■■□□□ 1.54
SUSD3-205ENST00000617293 C4AP0C0L4 1744 aa24.69■■□□□ 1.54
SUSD3-205ENST00000617293 BABAM1Q9NWV8 329 aa24.68■■□□□ 1.54
SUSD3-205ENST00000617293 SRP68Q9UHB9 627 aaKnown RBP24.68■■□□□ 1.54
SUSD3-205ENST00000617293 ZNF330Q9Y3S2 320 aaPredicted RBP24.68■■□□□ 1.54
SUSD3-205ENST00000617293 ZPR1O75312 459 aa24.67■■□□□ 1.54
SUSD3-205ENST00000617293 GYS1P13807 737 aa24.67■■□□□ 1.54
SUSD3-205ENST00000617293 NLGN1Q8N2Q7 840 aa24.67■■□□□ 1.54
SUSD3-205ENST00000617293 COL15A1P39059 1388 aa24.67■■□□□ 1.54
SUSD3-205ENST00000617293 GIGYF1O75420 1035 aaPredicted RBP24.66■■□□□ 1.54
SUSD3-205ENST00000617293 EIF5P55010 431 aaKnown RBP24.66■■□□□ 1.54
SUSD3-205ENST00000617293 SYT17Q9BSW7 474 aa24.66■■□□□ 1.54
SUSD3-205ENST00000617293 USP42Q9H9J4 1324 aaKnown RBP24.65■■□□□ 1.54
SUSD3-205ENST00000617293 NPM2Q86SE8 214 aaKnown RBP24.65■■□□□ 1.54
SUSD3-205ENST00000617293 CHL1O00533 1208 aa24.64■■□□□ 1.54
SUSD3-205ENST00000617293 IL6STP40189 918 aaPredicted RBP24.64■■□□□ 1.54
SUSD3-205ENST00000617293 PIP4K2AP48426 406 aaPredicted RBP24.64■■□□□ 1.54
SUSD3-205ENST00000617293 USPL1Q5W0Q7 1092 aa24.64■■□□□ 1.54
SUSD3-205ENST00000617293 A0A087WZG4 1122 aa24.63■■□□□ 1.53
SUSD3-205ENST00000617293 MMP10P09238 476 aa24.63■■□□□ 1.53
SUSD3-205ENST00000617293 NARFQ9UHQ1 456 aa24.63■■□□□ 1.53
SUSD3-205ENST00000617293 FKBP8Q14318 412 aa24.62■■□□□ 1.53
SUSD3-205ENST00000617293 CALD1Q05682 793 aaKnown RBP24.61■■□□□ 1.53
SUSD3-205ENST00000617293 CFAP44Q96MT7 982 aa24.61■■□□□ 1.53
SUSD3-205ENST00000617293 TBC1D2BQ9UPU7 963 aa24.6■■□□□ 1.53
SUSD3-205ENST00000617293 DIEXFQ68CQ4 756 aaKnown RBP24.59■■□□□ 1.53
SUSD3-205ENST00000617293 SALL2Q9Y467 1007 aaPredicted RBP24.59■■□□□ 1.53
SUSD3-205ENST00000617293 LAMB4A4D0S4 1761 aa24.58■■□□□ 1.53
SUSD3-205ENST00000617293 NBPF26B4DH59 902 aa24.58■■□□□ 1.53
SUSD3-205ENST00000617293 NBPF10Q6P3W6 841 aaKnown RBP24.58■■□□□ 1.53
SUSD3-205ENST00000617293 NBPF15Q8N660 670 aa24.58■■□□□ 1.53
SUSD3-205ENST00000617293 PARP3Q9Y6F1 533 aa24.58■■□□□ 1.53
SUSD3-205ENST00000617293 EIF2S2P20042 333 aaKnown RBP24.57■■□□□ 1.52
SUSD3-205ENST00000617293 BCL2L12Q9HB09 334 aa24.57■■□□□ 1.52
SUSD3-205ENST00000617293 MBIPQ9NS73 344 aa24.57■■□□□ 1.52
SUSD3-205ENST00000617293 GNAI1P63096 354 aa24.56■■□□□ 1.52
SUSD3-205ENST00000617293 CCDC27Q2M243 656 aa24.56■■□□□ 1.52
SUSD3-205ENST00000617293 KRT24Q2M2I5 525 aa24.56■■□□□ 1.52
SUSD3-205ENST00000617293 DZIP3Q86Y13 1208 aaKnown RBP24.56■■□□□ 1.52
SUSD3-205ENST00000617293 WWC1Q8IX03 1113 aa24.56■■□□□ 1.52
SUSD3-205ENST00000617293 IFT57Q9NWB7 429 aa24.56■■□□□ 1.52
SUSD3-205ENST00000617293 ZNF853P0CG23 659 aa24.55■■□□□ 1.52
SUSD3-205ENST00000617293 NGEFQ8N5V2 710 aa24.55■■□□□ 1.52
SUSD3-205ENST00000617293 NLGN2Q8NFZ4 835 aa24.55■■□□□ 1.52
SUSD3-205ENST00000617293 CD2APQ9Y5K6 639 aa24.55■■□□□ 1.52
SUSD3-205ENST00000617293 DCAF8L1A6NGE4 600 aa24.54■■□□□ 1.52
SUSD3-205ENST00000617293 CCER2I3L3R5 266 aa24.54■■□□□ 1.52
SUSD3-205ENST00000617293 TM4SF1P30408 202 aa24.54■■□□□ 1.52
SUSD3-205ENST00000617293 MYL6BP14649 208 aa24.53■■□□□ 1.52
SUSD3-205ENST00000617293 DDR1Q08345 913 aa24.52■■□□□ 1.52
SUSD3-205ENST00000617293 NFIXQ14938 502 aa24.52■■□□□ 1.52
SUSD3-205ENST00000617293 NCBP3Q53F19 620 aaKnown RBP24.52■■□□□ 1.52
SUSD3-205ENST00000617293 BICDL1Q6ZP65 573 aa24.52■■□□□ 1.52
SUSD3-205ENST00000617293 NECTIN2Q92692 538 aa24.52■■□□□ 1.52
SUSD3-205ENST00000617293 CAMTA2O94983 1202 aa24.51■■□□□ 1.51
SUSD3-205ENST00000617293 POLRMTO00411 1230 aaKnown RBP24.5■■□□□ 1.51
SUSD3-205ENST00000617293 DUSP27Q5VZP5 1158 aa24.49■■□□□ 1.51
SUSD3-205ENST00000617293 TBC1D9BQ66K14 1250 aa24.49■■□□□ 1.51
SUSD3-205ENST00000617293 ERBB4Q15303 1308 aa24.49■■□□□ 1.51
SUSD3-205ENST00000617293 SCN7AQ01118 1682 aa24.48■■□□□ 1.51
SUSD3-205ENST00000617293 ELL2O00472 640 aaPredicted RBP24.47■■□□□ 1.51
SUSD3-205ENST00000617293 PELP1Q8IZL8 1130 aaKnown RBP24.47■■□□□ 1.51
SUSD3-205ENST00000617293 MIER1Q8N108 512 aa24.47■■□□□ 1.51
SUSD3-205ENST00000617293 ANXA1P04083 346 aa24.46■■□□□ 1.51
SUSD3-205ENST00000617293 SERPINB2P05120 415 aa24.46■■□□□ 1.51
SUSD3-205ENST00000617293 HOXB7P09629 217 aa24.46■■□□□ 1.51
SUSD3-205ENST00000617293 PDIA6Q15084 440 aa24.46■■□□□ 1.51
SUSD3-205ENST00000617293 HDGFL1Q5TGJ6 251 aa24.46■■□□□ 1.51
SUSD3-205ENST00000617293 TSR2Q969E8 191 aaKnown RBP24.46■■□□□ 1.51
SUSD3-205ENST00000617293 ZNF652Q9Y2D9 606 aa24.46■■□□□ 1.51
SUSD3-205ENST00000617293 BCORQ6W2J9 1755 aa24.45■■□□□ 1.5
SUSD3-205ENST00000617293 GPR162Q16538 588 aa24.45■■□□□ 1.5
SUSD3-205ENST00000617293 PROSER3Q2NL68 480 aa24.45■■□□□ 1.5
SUSD3-205ENST00000617293 CLEC4GQ6UXB4 293 aa24.45■■□□□ 1.5
SUSD3-205ENST00000617293 KIF6Q6ZMV9 814 aa24.45■■□□□ 1.5
SUSD3-205ENST00000617293 TTLL7Q6ZT98 887 aa24.45■■□□□ 1.5
SUSD3-205ENST00000617293 WDR63Q8IWG1 891 aa24.45■■□□□ 1.5
SUSD3-205ENST00000617293 SETDB2Q96T68 719 aa24.45■■□□□ 1.5
SUSD3-205ENST00000617293 IL16Q14005 1332 aa24.44■■□□□ 1.5
SUSD3-205ENST00000617293 C10orf71Q711Q0 1435 aa24.44■■□□□ 1.5
SUSD3-205ENST00000617293 AFDNP55196 1824 aaKnown RBP24.43■■□□□ 1.5
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms