RNA–Protein interactions for RNA: ENST00000615671.1

GABPB1-212, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

Gene GABPB1, Length 6,266 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-212ENST00000615671 KIF1BPQ96EK5 621 aa21.77■■□□□ 1.08
GABPB1-212ENST00000615671 IFIT3O14879 490 aaKnown RBP21.77■■□□□ 1.08
GABPB1-212ENST00000615671 PUF60Q9UHX1 559 aaKnown RBP21.77■■□□□ 1.08
GABPB1-212ENST00000615671 EMILIN1Q9Y6C2 1016 aa21.77■■□□□ 1.08
GABPB1-212ENST00000615671 SSRP1Q08945 709 aaKnown RBP21.77■■□□□ 1.07
GABPB1-212ENST00000615671 ARHGAP29Q52LW3 1261 aa21.77■■□□□ 1.07
GABPB1-212ENST00000615671 CCDC150Q8NCX0 1101 aa21.77■■□□□ 1.07
GABPB1-212ENST00000615671 COMMD10Q9Y6G5 202 aa21.76■■□□□ 1.07
GABPB1-212ENST00000615671 A0A087WZG4 1122 aa21.76■■□□□ 1.07
GABPB1-212ENST00000615671 SYCE3A1L190 88 aa21.76■■□□□ 1.07
GABPB1-212ENST00000615671 GOLGA8AA7E2F4 631 aa21.76■■□□□ 1.07
GABPB1-212ENST00000615671 GOLGA8BA8MQT2 603 aa21.76■■□□□ 1.07
GABPB1-212ENST00000615671 SMTNL1A8MU46 457 aa21.76■■□□□ 1.07
GABPB1-212ENST00000615671 HAND2P61296 217 aa21.76■■□□□ 1.07
GABPB1-212ENST00000615671 FERMT2Q96AC1 680 aa21.76■■□□□ 1.07
GABPB1-212ENST00000615671 SKAP1Q86WV1 359 aa21.75■■□□□ 1.07
GABPB1-212ENST00000615671 IQCA1Q86XH1 822 aa21.75■■□□□ 1.07
GABPB1-212ENST00000615671 CCDC61Q9Y6R9 512 aa21.75■■□□□ 1.07
GABPB1-212ENST00000615671 ATAD2Q6PL18 1390 aa21.75■■□□□ 1.07
GABPB1-212ENST00000615671 SPA17Q15506 151 aa21.75■■□□□ 1.07
GABPB1-212ENST00000615671 KIAA1107Q9UPP5 1409 aa21.75■■□□□ 1.07
GABPB1-212ENST00000615671 AMOTL2Q9Y2J4 779 aa21.75■■□□□ 1.07
GABPB1-212ENST00000615671 MAP3K2Q9Y2U5 619 aa21.75■■□□□ 1.07
GABPB1-212ENST00000615671 FKBP15Q5T1M5 1219 aa21.74■■□□□ 1.07
GABPB1-212ENST00000615671 ISM2Q6H9L7 571 aa21.74■■□□□ 1.07
GABPB1-212ENST00000615671 PANK2Q9BZ23 570 aa21.74■■□□□ 1.07
GABPB1-212ENST00000615671 DNAI2Q9GZS0 605 aa21.74■■□□□ 1.07
GABPB1-212ENST00000615671 C8orf76Q96K31 380 aa21.74■■□□□ 1.07
GABPB1-212ENST00000615671 FBXO31Q5XUX0 539 aaPredicted RBP21.73■■□□□ 1.07
GABPB1-212ENST00000615671 GOLIM4O00461 696 aa21.73■■□□□ 1.07
GABPB1-212ENST00000615671 TMEM266Q2M3C6 531 aa21.73■■□□□ 1.07
GABPB1-212ENST00000615671 SNAPC4Q5SXM2 1469 aa21.73■■□□□ 1.07
GABPB1-212ENST00000615671 DDX46Q7L014 1031 aaKnown RBP21.73■■□□□ 1.07
GABPB1-212ENST00000615671 KRT28Q7Z3Y7 464 aa21.73■■□□□ 1.07
GABPB1-212ENST00000615671 BCCIPQ9P287 314 aaKnown RBP eCLIP21.73■■□□□ 1.07
GABPB1-212ENST00000615671 DYDC1Q8WWB3 177 aa21.73■■□□□ 1.07
GABPB1-212ENST00000615671 PHF8Q9UPP1 1060 aa21.73■■□□□ 1.07
GABPB1-212ENST00000615671 NAIPQ13075 1403 aa21.72■■□□□ 1.07
GABPB1-212ENST00000615671 CCDC194A0A1B0GVG4 234 aa21.72■■□□□ 1.07
GABPB1-212ENST00000615671 ERLIN1O75477 346 aa21.72■■□□□ 1.07
GABPB1-212ENST00000615671 CCDC184Q52MB2 194 aa21.72■■□□□ 1.07
GABPB1-212ENST00000615671 IQCEQ6IPM2 695 aa21.72■■□□□ 1.07
GABPB1-212ENST00000615671 CCDC148Q8NFR7 591 aa21.72■■□□□ 1.07
GABPB1-212ENST00000615671 IQSEC3Q9UPP2 1182 aaPredicted RBP21.72■■□□□ 1.07
GABPB1-212ENST00000615671 ERICH4A6NGS2 130 aa21.72■■□□□ 1.07
GABPB1-212ENST00000615671 TDRD12Q587J7 1177 aaKnown RBP21.72■■□□□ 1.07
GABPB1-212ENST00000615671 TCERG1LQ5VWI1 586 aa21.72■■□□□ 1.07
GABPB1-212ENST00000615671 GSTTP1A0A1W2PQM5 241 aa21.71■■□□□ 1.07
GABPB1-212ENST00000615671 MAP3K11Q16584 847 aa21.71■■□□□ 1.07
GABPB1-212ENST00000615671 TSHZ3Q63HK5 1081 aa21.71■■□□□ 1.07
GABPB1-212ENST00000615671 GRPEL1Q9HAV7 217 aa21.71■■□□□ 1.07
GABPB1-212ENST00000615671 CATIPQ7Z7H3 387 aa21.71■■□□□ 1.07
GABPB1-212ENST00000615671 CTNNA2P26232 953 aa21.71■■□□□ 1.07
GABPB1-212ENST00000615671 EHMT1Q9H9B1 1298 aa21.71■■□□□ 1.07
GABPB1-212ENST00000615671 CETN2P41208 172 aa21.7■■□□□ 1.07
GABPB1-212ENST00000615671 UBE4AQ14139 1066 aa21.7■■□□□ 1.07
GABPB1-212ENST00000615671 PRKCSHP14314 528 aaPredicted RBP21.7■■□□□ 1.06
GABPB1-212ENST00000615671 HMGN5P82970 282 aaKnown RBP21.7■■□□□ 1.06
GABPB1-212ENST00000615671 PICALMQ13492 652 aa21.7■■□□□ 1.06
GABPB1-212ENST00000615671 RBM26Q5T8P6 1007 aaKnown RBP21.7■■□□□ 1.06
GABPB1-212ENST00000615671 HFM1A2PYH4 1435 aa21.7■■□□□ 1.06
GABPB1-212ENST00000615671 TSPY2A6NKD2 308 aa21.7■■□□□ 1.06
GABPB1-212ENST00000615671 BICD1Q96G01 975 aa21.7■■□□□ 1.06
GABPB1-212ENST00000615671 NUP88Q99567 741 aaPredicted RBP21.7■■□□□ 1.06
GABPB1-212ENST00000615671 ST5P78524 1137 aa21.7■■□□□ 1.06
GABPB1-212ENST00000615671 RPAP2Q8IXW5 612 aaPredicted RBP21.7■■□□□ 1.06
GABPB1-212ENST00000615671 UQCRHLA0A096LP55 91 aa21.69■■□□□ 1.06
GABPB1-212ENST00000615671 GLRX3O76003 335 aaKnown RBP21.69■■□□□ 1.06
GABPB1-212ENST00000615671 UQCRHP07919 91 aa21.69■■□□□ 1.06
GABPB1-212ENST00000615671 SLF2Q8IX21 1173 aa21.69■■□□□ 1.06
GABPB1-212ENST00000615671 SYCP3Q8IZU3 236 aa21.69■■□□□ 1.06
GABPB1-212ENST00000615671 GOLGA6L10A0A0M3HER8 536 aa21.69■■□□□ 1.06
GABPB1-212ENST00000615671 GOLGA6L7A0A1B0GV03 622 aa21.69■■□□□ 1.06
GABPB1-212ENST00000615671 ZNF354CQ86Y25 554 aa21.69■■□□□ 1.06
GABPB1-212ENST00000615671 CABP5Q9NP86 173 aa21.69■■□□□ 1.06
GABPB1-212ENST00000615671 BIN1O00499 593 aa21.68■■□□□ 1.06
GABPB1-212ENST00000615671 RAB11FIP3O75154 756 aa21.68■■□□□ 1.06
GABPB1-212ENST00000615671 DNAAF4Q8WXU2 420 aa21.68■■□□□ 1.06
GABPB1-212ENST00000615671 ANXA1P04083 346 aa21.68■■□□□ 1.06
GABPB1-212ENST00000615671 BAG4O95429 457 aaKnown RBP21.68■■□□□ 1.06
GABPB1-212ENST00000615671 EIF3JO75822 258 aaKnown RBP21.68■■□□□ 1.06
GABPB1-212ENST00000615671 ERICH3Q5RHP9 1530 aa21.68■■□□□ 1.06
GABPB1-212ENST00000615671 LDHAL6AQ6ZMR3 332 aa21.68■■□□□ 1.06
GABPB1-212ENST00000615671 C8orf37Q96NL8 207 aa21.68■■□□□ 1.06
GABPB1-212ENST00000615671 KAT14Q9H8E8 782 aa21.67■■□□□ 1.06
GABPB1-212ENST00000615671 AMOTQ4VCS5 1084 aa21.67■■□□□ 1.06
GABPB1-212ENST00000615671 IDEP14735 1019 aa21.67■■□□□ 1.06
GABPB1-212ENST00000615671 MAP2K1Q02750 393 aaPredicted RBP21.67■■□□□ 1.06
GABPB1-212ENST00000615671 CKAP2LQ8IYA6 745 aa21.67■■□□□ 1.06
GABPB1-212ENST00000615671 MYO1BO43795 1136 aa21.67■■□□□ 1.06
GABPB1-212ENST00000615671 CASQ1P31415 396 aa21.67■■□□□ 1.06
GABPB1-212ENST00000615671 NBPF6Q5VWK0 638 aa21.67■■□□□ 1.06
GABPB1-212ENST00000615671 NBPF5PQ86XG9 351 aaPredicted RBP21.67■■□□□ 1.06
GABPB1-212ENST00000615671 NBPF4Q96M43 638 aa21.67■■□□□ 1.06
GABPB1-212ENST00000615671 PLS1Q14651 629 aa21.66■■□□□ 1.06
GABPB1-212ENST00000615671 CCDC91Q7Z6B0 441 aa21.66■■□□□ 1.06
GABPB1-212ENST00000615671 PRC1O43663 620 aa21.66■■□□□ 1.06
GABPB1-212ENST00000615671 TMEM67Q5HYA8 995 aa21.66■■□□□ 1.06
GABPB1-212ENST00000615671 PRPF4BQ13523 1007 aaKnown RBP21.66■■□□□ 1.06
GABPB1-212ENST00000615671 CNNM3Q8NE01 707 aa21.66■■□□□ 1.06
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms