RNA–Protein interactions for RNA: ENST00000614526.1

LIG4-205, Transcript of DNA ligase 4, humanhuman

TSL 2 BASIC

Gene LIG4, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG4-205ENST00000614526 ALS2Q96Q42 1657 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 MAP4K4O95819 1239 aaPredicted RBP4.27□□□□□ -1.73
LIG4-205ENST00000614526 PDIA6Q15084 440 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 PLEKHM2Q8IWE5 1019 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 ACSBG1Q96GR2 724 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 MYD88Q99836 296 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 ANP32EQ9BTT0 268 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 CARD10Q9BWT7 1032 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 UPF2Q9HAU5 1272 aaKnown RBP4.27□□□□□ -1.73
LIG4-205ENST00000614526 ASAP1Q9ULH1 1129 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 PA2G4Q9UQ80 394 aaKnown RBP4.27□□□□□ -1.73
LIG4-205ENST00000614526 CPDO75976 1380 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 HMMRO75330 724 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 SNRPA1P09661 255 aaKnown RBP4.27□□□□□ -1.73
LIG4-205ENST00000614526 OS9Q13438 667 aaPredicted RBP4.27□□□□□ -1.73
LIG4-205ENST00000614526 KSR2Q6VAB6 950 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 NUTM1Q86Y26 1132 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 KLHDC4Q8TBB5 520 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 FMNL2Q96PY5 1086 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 SIL1Q9H173 461 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 DDX21Q9NR30 783 aaKnown RBP eCLIP4.27□□□□□ -1.73
LIG4-205ENST00000614526 ATP10DQ9P241 1426 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 ADCY9O60503 1353 aa4.27□□□□□ -1.73
LIG4-205ENST00000614526 GSPT1P15170 499 aaKnown RBP4.26□□□□□ -1.73
LIG4-205ENST00000614526 ATP8B2P98198 1209 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 ZBTB3Q9H5J0 574 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP4.26□□□□□ -1.73
LIG4-205ENST00000614526 PCDH11XQ9BZA7 1347 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 PCDH11YQ9BZA8 1340 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 HSP90AB1P08238 724 aaKnown RBP4.26□□□□□ -1.73
LIG4-205ENST00000614526 TTLL7Q6ZT98 887 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 HYPKQ9NX55 129 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 TMOD3Q9NYL9 352 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 COL5A2P05997 1499 aaPredicted RBP4.26□□□□□ -1.73
LIG4-205ENST00000614526 FAM182BQ5T319 152 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 TBC1D9Q6ZT07 1266 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 ANKRD13DQ6ZTN6 518 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 RILPL2Q969X0 211 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 C8orf37Q96NL8 207 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 C22orf23Q9BZE7 217 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 SLKQ9H2G2 1235 aaPredicted RBP4.26□□□□□ -1.73
LIG4-205ENST00000614526 USP54Q70EL1 1684 aa4.26□□□□□ -1.73
LIG4-205ENST00000614526 TRIM6-TRIM34B2RNG4 842 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 NBPF26B4DH59 902 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 EXOC5O00471 708 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 DDX58O95786 925 aaKnown RBP4.25□□□□□ -1.73
LIG4-205ENST00000614526 IGKV5-2P06315 115 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 HOXB7P09629 217 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 NBPF14Q5TI25 921 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 NBPF10Q6P3W6 841 aaKnown RBP4.25□□□□□ -1.73
LIG4-205ENST00000614526 NBPF15Q8N660 670 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 PIGBQ92521 554 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 SUCLG2Q96I99 432 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 CCDC85AQ96PX6 553 aaPredicted RBP4.25□□□□□ -1.73
LIG4-205ENST00000614526 LRRCC1Q9C099 1032 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 CHMP3Q9Y3E7 222 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 SOS1Q07889 1333 aaPredicted RBP4.25□□□□□ -1.73
LIG4-205ENST00000614526 TOM1O60784 492 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 SDSP20132 328 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 PRIM1P49642 420 aaKnown RBP4.25□□□□□ -1.73
LIG4-205ENST00000614526 KCNQ4P56696 695 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 NEXNQ0ZGT2 675 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 NCAPD2Q15021 1401 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 UBE3BQ7Z3V4 1068 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 DNAJC10Q8IXB1 793 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 PHRF1Q9P1Y6 1649 aaKnown RBP4.25□□□□□ -1.73
LIG4-205ENST00000614526 BMP2KLQ5H9B9 411 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 EPHA10Q5JZY3 1008 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 DDRGK1Q96HY6 314 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 NGLY1Q96IV0 654 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 BICC1Q9H694 974 aaKnown RBP4.25□□□□□ -1.73
LIG4-205ENST00000614526 OVOS2A0A0G2JMS6 1433 aa4.25□□□□□ -1.73
LIG4-205ENST00000614526 COL18A1P39060 1754 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 GRM8O00222 908 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 PDE1AP54750 535 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 TTC22Q5TAA0 569 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 LINS1Q8NG48 757 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 TBC1D32Q96NH3 1257 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 FOXD4L1Q9NU39 408 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.24□□□□□ -1.73
LIG4-205ENST00000614526 A0A087WZG4 1122 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 FAM177BA6PVY3 158 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 FAM98CQ17RN3 349 aaKnown RBP4.24□□□□□ -1.73
LIG4-205ENST00000614526 UNC5CLQ8IV45 518 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 KAZALD1Q96I82 304 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 CHMP4AQ9BY43 222 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 HEG1Q9ULI3 1381 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 LRRC37A3O60309 1634 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 NEURL1BA8MQ27 555 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 ERVV-2B6SEH9 535 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 GPTP24298 496 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 SMIM5Q71RC9 77 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 RHPN1Q8TCX5 695 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 SSH3Q8TE77 659 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 ATG3Q9NT62 314 aa4.24□□□□□ -1.73
LIG4-205ENST00000614526 KCNQ2O43526 872 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 CDC45O75419 566 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 MX1P20591 662 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 GCKRQ14397 625 aa4.23□□□□□ -1.73
LIG4-205ENST00000614526 DDB1Q16531 1140 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 24.6 ms