RNA–Protein interactions for RNA: ENST00000612482.4

SREBF2-209, Transcript of sterol regulatory element binding transcription factor 2, humanhuman

TSL 5 BASIC

Gene SREBF2, Length 5,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF2-209ENST00000612482 CDK13Q14004 1512 aaKnown RBP22.29■■□□□ 1.16
SREBF2-209ENST00000612482 USHBP1Q8N6Y0 703 aa22.29■■□□□ 1.16
SREBF2-209ENST00000612482 BIN1O00499 593 aa22.28■■□□□ 1.16
SREBF2-209ENST00000612482 CNNM3Q8NE01 707 aa22.28■■□□□ 1.16
SREBF2-209ENST00000612482 PTCD1O75127 700 aaKnown RBP22.28■■□□□ 1.16
SREBF2-209ENST00000612482 SSR1P43307 286 aaKnown RBP22.28■■□□□ 1.16
SREBF2-209ENST00000612482 MAP9Q49MG5 647 aa22.28■■□□□ 1.16
SREBF2-209ENST00000612482 CCDC196A0A1B0GTZ2 297 aa22.28■■□□□ 1.16
SREBF2-209ENST00000612482 KLHL40Q2TBA0 621 aa22.27■■□□□ 1.16
SREBF2-209ENST00000612482 NEMFO60524 1076 aa22.27■■□□□ 1.16
SREBF2-209ENST00000612482 TMC6Q7Z403 805 aa22.27■■□□□ 1.16
SREBF2-209ENST00000612482 CACNA2D4Q7Z3S7 1137 aa22.27■■□□□ 1.16
SREBF2-209ENST00000612482 NCOA1Q15788 1441 aa22.27■■□□□ 1.15
SREBF2-209ENST00000612482 GOLGA8BA8MQT2 603 aa22.26■■□□□ 1.15
SREBF2-209ENST00000612482 ZNF213O14771 459 aa22.26■■□□□ 1.15
SREBF2-209ENST00000612482 NUP88Q99567 741 aaPredicted RBP22.26■■□□□ 1.15
SREBF2-209ENST00000612482 GBP2P32456 591 aaPredicted RBP22.26■■□□□ 1.15
SREBF2-209ENST00000612482 TSHZ3Q63HK5 1081 aa22.26■■□□□ 1.15
SREBF2-209ENST00000612482 MCM5P33992 734 aa22.26■■□□□ 1.15
SREBF2-209ENST00000612482 DNA2P51530 1060 aa22.26■■□□□ 1.15
SREBF2-209ENST00000612482 SLC12A7Q9Y666 1083 aa22.26■■□□□ 1.15
SREBF2-209ENST00000612482 STARD3NLO95772 234 aa22.25■■□□□ 1.15
SREBF2-209ENST00000612482 EZRP15311 586 aaKnown RBP22.25■■□□□ 1.15
SREBF2-209ENST00000612482 FLIIQ13045 1269 aa22.25■■□□□ 1.15
SREBF2-209ENST00000612482 STX1AQ16623 288 aa22.25■■□□□ 1.15
SREBF2-209ENST00000612482 ZSCAN23Q3MJ62 389 aa22.25■■□□□ 1.15
SREBF2-209ENST00000612482 ZNF165P49910 485 aa22.25■■□□□ 1.15
SREBF2-209ENST00000612482 GSDMDP57764 484 aa22.25■■□□□ 1.15
SREBF2-209ENST00000612482 PPP4R3BQ5MIZ7 849 aa22.25■■□□□ 1.15
SREBF2-209ENST00000612482 CCDC113Q9H0I3 377 aa22.25■■□□□ 1.15
SREBF2-209ENST00000612482 PTPRCP08575 1304 aa22.24■■□□□ 1.15
SREBF2-209ENST00000612482 KCNH5Q8NCM2 988 aa22.24■■□□□ 1.15
SREBF2-209ENST00000612482 EVI5LQ96CN4 794 aa22.24■■□□□ 1.15
SREBF2-209ENST00000612482 SEC63Q9UGP8 760 aaKnown RBP22.24■■□□□ 1.15
SREBF2-209ENST00000612482 TOP2BQ02880 1626 aa22.24■■□□□ 1.15
SREBF2-209ENST00000612482 EPRSP07814 1512 aaKnown RBP22.24■■□□□ 1.15
SREBF2-209ENST00000612482 TTC22Q5TAA0 569 aa22.24■■□□□ 1.15
SREBF2-209ENST00000612482 ECHDC1Q9NTX5 307 aa22.24■■□□□ 1.15
SREBF2-209ENST00000612482 PPP1R12BO60237 982 aaPredicted RBP22.24■■□□□ 1.15
SREBF2-209ENST00000612482 KRI1Q8N9T8 703 aaKnown RBP22.24■■□□□ 1.15
SREBF2-209ENST00000612482 CTCFLQ8NI51 663 aaPredicted RBP22.24■■□□□ 1.15
SREBF2-209ENST00000612482 LUZP1Q86V48 1076 aa22.23■■□□□ 1.15
SREBF2-209ENST00000612482 TRERF1Q96PN7 1200 aa22.23■■□□□ 1.15
SREBF2-209ENST00000612482 DYDC1Q8WWB3 177 aa22.23■■□□□ 1.15
SREBF2-209ENST00000612482 PHAXQ9H814 394 aaKnown RBP22.23■■□□□ 1.15
SREBF2-209ENST00000612482 CCDC141Q6ZP82 1450 aa22.23■■□□□ 1.15
SREBF2-209ENST00000612482 GOLGA8AA7E2F4 631 aa22.23■■□□□ 1.15
SREBF2-209ENST00000612482 MATR3P43243 847 aaKnown RBP eCLIP22.23■■□□□ 1.155e-7■■■□□ 16.9
SREBF2-209ENST00000612482 UBE2HP62256 183 aa22.23■■□□□ 1.15
SREBF2-209ENST00000612482 MKNK2Q9HBH9 465 aa22.23■■□□□ 1.15
SREBF2-209ENST00000612482 MCM3P25205 808 aa22.22■■□□□ 1.15
SREBF2-209ENST00000612482 SSRP1Q08945 709 aaKnown RBP22.22■■□□□ 1.15
SREBF2-209ENST00000612482 MPRIPQ6WCQ1 1025 aa22.22■■□□□ 1.15
SREBF2-209ENST00000612482 TSG101Q99816 390 aa22.22■■□□□ 1.15
SREBF2-209ENST00000612482 RANBP6O60518 1105 aaKnown RBP22.22■■□□□ 1.15
SREBF2-209ENST00000612482 HCLS1P14317 486 aaPredicted RBP22.22■■□□□ 1.15
SREBF2-209ENST00000612482 NUTM2BA6NNL0 878 aaPredicted RBP22.22■■□□□ 1.15
SREBF2-209ENST00000612482 NUTM2EB1AL46 878 aaPredicted RBP22.22■■□□□ 1.15
SREBF2-209ENST00000612482 YEATS4O95619 227 aa22.22■■□□□ 1.15
SREBF2-209ENST00000612482 NUTM2AQ8IVF1 878 aaPredicted RBP22.22■■□□□ 1.15
SREBF2-209ENST00000612482 MPHOSPH10O00566 681 aaKnown RBP22.21■■□□□ 1.15
SREBF2-209ENST00000612482 IFIT3O14879 490 aaKnown RBP22.21■■□□□ 1.15
SREBF2-209ENST00000612482 MAP3K12Q12852 859 aa22.21■■□□□ 1.15
SREBF2-209ENST00000612482 PPFIA3O75145 1194 aa22.21■■□□□ 1.15
SREBF2-209ENST00000612482 IFIT5Q13325 482 aaKnown RBP22.21■■□□□ 1.15
SREBF2-209ENST00000612482 SNW1Q13573 536 aaKnown RBP22.21■■□□□ 1.15
SREBF2-209ENST00000612482 CCDC178Q5BJE1 867 aa22.21■■□□□ 1.15
SREBF2-209ENST00000612482 SPDYE4A6NLX3 237 aa22.21■■□□□ 1.15
SREBF2-209ENST00000612482 ANKLE2Q86XL3 938 aa22.21■■□□□ 1.15
SREBF2-209ENST00000612482 POLR3DP05423 398 aaPredicted RBP22.2■■□□□ 1.14
SREBF2-209ENST00000612482 GTF2F1P35269 517 aaKnown RBP eCLIP22.2■■□□□ 1.142e-24■■■□□ 16.1
SREBF2-209ENST00000612482 PAFAH1B1P43034 410 aa22.2■■□□□ 1.14
SREBF2-209ENST00000612482 MAP2K1Q02750 393 aaPredicted RBP22.2■■□□□ 1.14
SREBF2-209ENST00000612482 UVSSAQ2YD98 709 aa22.2■■□□□ 1.14
SREBF2-209ENST00000612482 ISM2Q6H9L7 571 aa22.2■■□□□ 1.14
SREBF2-209ENST00000612482 GIMAP6Q6P9H5 292 aa22.2■■□□□ 1.14
SREBF2-209ENST00000612482 DHX29Q7Z478 1369 aaKnown RBP22.2■■□□□ 1.14
SREBF2-209ENST00000612482 USO1O60763 962 aaKnown RBP22.2■■□□□ 1.14
SREBF2-209ENST00000612482 IBSPP21815 317 aaPredicted RBP22.2■■□□□ 1.14
SREBF2-209ENST00000612482 DBF4Q9UBU7 674 aaPredicted RBP22.2■■□□□ 1.14
SREBF2-209ENST00000612482 CAVIN4Q5BKX8 364 aa22.2■■□□□ 1.14
SREBF2-209ENST00000612482 PANK2Q9BZ23 570 aa22.2■■□□□ 1.14
SREBF2-209ENST00000612482 ZNF287Q9HBT7 754 aa22.2■■□□□ 1.14
SREBF2-209ENST00000612482 ADGRF5Q8IZF2 1346 aa22.19■■□□□ 1.14
SREBF2-209ENST00000612482 UBA5Q9GZZ9 404 aa22.19■■□□□ 1.14
SREBF2-209ENST00000612482 CALCOCO1Q9P1Z2 691 aa22.19■■□□□ 1.14
SREBF2-209ENST00000612482 TDRD12Q587J7 1177 aaKnown RBP22.19■■□□□ 1.14
SREBF2-209ENST00000612482 MBIPQ9NS73 344 aa22.19■■□□□ 1.14
SREBF2-209ENST00000612482 IQCA1Q86XH1 822 aa22.19■■□□□ 1.14
SREBF2-209ENST00000612482 TMX3Q96JJ7 454 aa22.19■■□□□ 1.14
SREBF2-209ENST00000612482 INCENPQ9NQS7 918 aa22.19■■□□□ 1.14
SREBF2-209ENST00000612482 LRSAM1Q6UWE0 723 aa22.19■■□□□ 1.14
SREBF2-209ENST00000612482 USP16Q9Y5T5 823 aa22.19■■□□□ 1.14
SREBF2-209ENST00000612482 IFFO1Q0D2I5 559 aa22.18■■□□□ 1.14
SREBF2-209ENST00000612482 A0A087WZG4 1122 aa22.18■■□□□ 1.14
SREBF2-209ENST00000612482 VPS36Q86VN1 386 aa22.18■■□□□ 1.14
SREBF2-209ENST00000612482 GOLIM4O00461 696 aa22.18■■□□□ 1.14
SREBF2-209ENST00000612482 AMOTQ4VCS5 1084 aa22.18■■□□□ 1.14
SREBF2-209ENST00000612482 ARHGEF11O15085 1522 aa22.18■■□□□ 1.14
SREBF2-209ENST00000612482 NESP48681 1621 aa22.18■■□□□ 1.14
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms