RNA–Protein interactions for RNA: ENST00000610623.4

TP53-220, Transcript of tumor protein p53, humanhuman

TSL 1 (best) BASIC

Gene TP53, Length 2,331 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TP53-220ENST00000610623 CHAF1AQ13111 956 aaPredicted RBP14.43□□□□□ -0.1
TP53-220ENST00000610623 TTC21BQ7Z4L5 1316 aa14.43□□□□□ -0.1
TP53-220ENST00000610623 REC8O95072 547 aa14.43□□□□□ -0.1
TP53-220ENST00000610623 MCM2P49736 904 aa14.43□□□□□ -0.1
TP53-220ENST00000610623 NCKAP5LQ9HCH0 1330 aa14.43□□□□□ -0.1
TP53-220ENST00000610623 OVOS2A0A0J9YW53 1432 aa14.43□□□□□ -0.1
TP53-220ENST00000610623 OVOS2Q6IE36 1432 aa14.43□□□□□ -0.1
TP53-220ENST00000610623 ACEP12821 1306 aa14.42□□□□□ -0.1
TP53-220ENST00000610623 IL13P35225 146 aa14.42□□□□□ -0.1
TP53-220ENST00000610623 EMILIN1Q9Y6C2 1016 aa14.42□□□□□ -0.1
TP53-220ENST00000610623 ANKARQ7Z5J8 1434 aa14.42□□□□□ -0.1
TP53-220ENST00000610623 ADAMTSL3P82987 1691 aa14.41□□□□□ -0.1
TP53-220ENST00000610623 CTIFO43310 598 aaKnown RBP14.41□□□□□ -0.1
TP53-220ENST00000610623 TPM3P06753 285 aa14.41□□□□□ -0.1
TP53-220ENST00000610623 C1orf115Q9H7X2 142 aa14.41□□□□□ -0.1
TP53-220ENST00000610623 TTC21AQ8NDW8 1320 aa14.41□□□□□ -0.1
TP53-220ENST00000610623 PRKAR2BP31323 418 aa14.41□□□□□ -0.1
TP53-220ENST00000610623 ZNF830Q96NB3 372 aaPredicted RBP14.41□□□□□ -0.1
TP53-220ENST00000610623 DCTPP1Q9H773 170 aa14.41□□□□□ -0.1
TP53-220ENST00000610623 OGFRQ9NZT2 677 aa14.41□□□□□ -0.1
TP53-220ENST00000610623 SSH2Q76I76 1423 aa14.41□□□□□ -0.1
TP53-220ENST00000610623 FMN2Q9NZ56 1722 aa14.41□□□□□ -0.1
TP53-220ENST00000610623 ADCY5O95622 1261 aa14.4□□□□□ -0.1
TP53-220ENST00000610623 NFE2L2Q16236 605 aa14.4□□□□□ -0.1
TP53-220ENST00000610623 TTC12Q9H892 705 aaPredicted RBP14.4□□□□□ -0.1
TP53-220ENST00000610623 ZRANB1Q9UGI0 708 aa14.4□□□□□ -0.1
TP53-220ENST00000610623 ABCC4O15439 1325 aa14.4□□□□□ -0.1
TP53-220ENST00000610623 MRPL50Q8N5N7 158 aaKnown RBP14.4□□□□□ -0.11
TP53-220ENST00000610623 INTS4Q96HW7 963 aaKnown RBP14.4□□□□□ -0.11
TP53-220ENST00000610623 TMEM51Q9NW97 253 aa14.4□□□□□ -0.11
TP53-220ENST00000610623 USP25Q9UHP3 1055 aa14.4□□□□□ -0.11
TP53-220ENST00000610623 KIF24Q5T7B8 1368 aa14.39□□□□□ -0.11
TP53-220ENST00000610623 USP31Q70CQ4 1352 aa14.39□□□□□ -0.11
TP53-220ENST00000610623 GABPB1Q06547 395 aaPredicted RBP14.39□□□□□ -0.11
TP53-220ENST00000610623 SYCP1Q15431 976 aa14.39□□□□□ -0.11
TP53-220ENST00000610623 RGPD8O14715 1765 aaPredicted RBP14.39□□□□□ -0.11
TP53-220ENST00000610623 CUL4AQ13619 759 aa14.38□□□□□ -0.11
TP53-220ENST00000610623 KIAA1524Q8TCG1 905 aa14.38□□□□□ -0.11
TP53-220ENST00000610623 CHAMP1Q96JM3 812 aa14.38□□□□□ -0.11
TP53-220ENST00000610623 CHD2O14647 1828 aaKnown RBP14.38□□□□□ -0.11
TP53-220ENST00000610623 ZBTB7CA1YPR0 619 aa14.38□□□□□ -0.11
TP53-220ENST00000610623 TMX3Q96JJ7 454 aa14.38□□□□□ -0.11
TP53-220ENST00000610623 USP54Q70EL1 1684 aa14.38□□□□□ -0.11
TP53-220ENST00000610623 DLG5Q8TDM6 1919 aa14.38□□□□□ -0.11
TP53-220ENST00000610623 SEMA3EO15041 775 aa14.37□□□□□ -0.11
TP53-220ENST00000610623 FBLN1P23142 703 aa14.37□□□□□ -0.11
TP53-220ENST00000610623 U2AF2P26368 475 aaKnown RBP eCLIP14.37□□□□□ -0.11
TP53-220ENST00000610623 LMOD3Q0VAK6 560 aa14.37□□□□□ -0.11
TP53-220ENST00000610623 CREBZFQ9NS37 354 aa14.37□□□□□ -0.11
TP53-220ENST00000610623 ERC2O15083 957 aa14.37□□□□□ -0.11
TP53-220ENST00000610623 KDM4AO75164 1064 aa14.37□□□□□ -0.11
TP53-220ENST00000610623 VAMP4O75379 141 aa14.37□□□□□ -0.11
TP53-220ENST00000610623 CCDC183Q5T5S1 534 aa14.37□□□□□ -0.11
TP53-220ENST00000610623 RGPD1P0DJD0 1748 aa14.36□□□□□ -0.11
TP53-220ENST00000610623 FAM177BA6PVY3 158 aa14.36□□□□□ -0.11
TP53-220ENST00000610623 SDSP20132 328 aa14.36□□□□□ -0.11
TP53-220ENST00000610623 ZNF771Q7L3S4 317 aaPredicted RBP14.36□□□□□ -0.11
TP53-220ENST00000610623 RRS1Q15050 365 aaKnown RBP14.36□□□□□ -0.11
TP53-220ENST00000610623 C17orf53Q8N3J3 647 aaPredicted RBP14.36□□□□□ -0.11
TP53-220ENST00000610623 PEAK1Q9H792 1746 aa14.36□□□□□ -0.11
TP53-220ENST00000610623 SETD1BQ9UPS6 1966 aaKnown RBP14.35□□□□□ -0.11
TP53-220ENST00000610623 HMOX1P09601 288 aa14.35□□□□□ -0.11
TP53-220ENST00000610623 FOXD4L5Q5VV16 416 aaPredicted RBP14.35□□□□□ -0.11
TP53-220ENST00000610623 TMEM87AQ8NBN3 555 aa14.35□□□□□ -0.11
TP53-220ENST00000610623 FOXD4L4Q8WXT5 416 aaPredicted RBP14.35□□□□□ -0.11
TP53-220ENST00000610623 NEK4P51957 841 aa14.35□□□□□ -0.11
TP53-220ENST00000610623 API5Q9BZZ5 524 aaKnown RBP14.35□□□□□ -0.11
TP53-220ENST00000610623 MX1P20591 662 aa14.34□□□□□ -0.11
TP53-220ENST00000610623 ANKLE2Q86XL3 938 aa14.34□□□□□ -0.11
TP53-220ENST00000610623 MPNDQ8N594 471 aa14.34□□□□□ -0.11
TP53-220ENST00000610623 PIK3C2AO00443 1686 aa14.34□□□□□ -0.11
TP53-220ENST00000610623 GOLGA6L6A8MZA4 724 aa14.33□□□□□ -0.11
TP53-220ENST00000610623 USP48Q86UV5 1035 aa14.33□□□□□ -0.11
TP53-220ENST00000610623 WDR33Q9C0J8 1336 aaKnown RBP14.33□□□□□ -0.12
TP53-220ENST00000610623 NUTM2FA1L443 756 aa14.33□□□□□ -0.12
TP53-220ENST00000610623 GNAI1P63096 354 aa14.33□□□□□ -0.12
TP53-220ENST00000610623 PHACTR3Q96KR7 559 aa14.33□□□□□ -0.12
TP53-220ENST00000610623 IFT57Q9NWB7 429 aa14.33□□□□□ -0.12
TP53-220ENST00000610623 CGNQ9P2M7 1197 aaKnown RBP14.33□□□□□ -0.12
TP53-220ENST00000610623 NAP1L2Q9ULW6 460 aaPredicted RBP14.33□□□□□ -0.12
TP53-220ENST00000610623 GADD45BO75293 160 aaPredicted RBP14.32□□□□□ -0.12
TP53-220ENST00000610623 C16orf71Q8IYS4 520 aaPredicted RBP14.32□□□□□ -0.12
TP53-220ENST00000610623 NGDNQ8NEJ9 315 aaKnown RBP14.32□□□□□ -0.12
TP53-220ENST00000610623 KCNA6P17658 529 aa14.32□□□□□ -0.12
TP53-220ENST00000610623 RPAP2Q8IXW5 612 aaPredicted RBP14.32□□□□□ -0.12
TP53-220ENST00000610623 IPO4Q8TEX9 1081 aaKnown RBP14.32□□□□□ -0.12
TP53-220ENST00000610623 CTNNA3Q9UI47 895 aa14.32□□□□□ -0.12
TP53-220ENST00000610623 CCDC66A2RUB6 948 aa14.31□□□□□ -0.12
TP53-220ENST00000610623 HCLS1P14317 486 aaPredicted RBP14.31□□□□□ -0.12
TP53-220ENST00000610623 ANAPC15P60006 121 aa14.31□□□□□ -0.12
TP53-220ENST00000610623 EIF4A2Q14240 407 aaKnown RBP14.31□□□□□ -0.12
TP53-220ENST00000610623 ANKRD44Q8N8A2 993 aa14.31□□□□□ -0.12
TP53-220ENST00000610623 DDX41Q9UJV9 622 aaKnown RBP14.31□□□□□ -0.12
TP53-220ENST00000610623 SBNO1A3KN83 1393 aa14.3□□□□□ -0.12
TP53-220ENST00000610623 RTL1A6NKG5 1358 aa14.3□□□□□ -0.12
TP53-220ENST00000610623 ARHGEF10O15013 1369 aa14.3□□□□□ -0.12
TP53-220ENST00000610623 MCCP23508 829 aa14.3□□□□□ -0.12
TP53-220ENST00000610623 NCBP1Q09161 790 aaKnown RBP14.3□□□□□ -0.12
TP53-220ENST00000610623 KCNF1Q9H3M0 494 aa14.3□□□□□ -0.12
TP53-220ENST00000610623 IGSF3O75054 1194 aa14.3□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms