RNA–Protein interactions for RNA: ENST00000610452.1

COL15A1-205, Transcript of collagen type XV alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL15A1, Length 5,422 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL15A1-205ENST00000610452 USP48Q86UV5 1035 aa23.38■■□□□ 1.33
COL15A1-205ENST00000610452 KRT18P05783 430 aaKnown RBP23.37■■□□□ 1.33
COL15A1-205ENST00000610452 SCLT1Q96NL6 688 aa23.37■■□□□ 1.33
COL15A1-205ENST00000610452 BIN1O00499 593 aa23.37■■□□□ 1.33
COL15A1-205ENST00000610452 ERO1AQ96HE7 468 aa23.37■■□□□ 1.33
COL15A1-205ENST00000610452 GOPCQ9HD26 462 aa23.37■■□□□ 1.33
COL15A1-205ENST00000610452 DUSP27Q5VZP5 1158 aa23.37■■□□□ 1.33
COL15A1-205ENST00000610452 SMC5Q8IY18 1101 aa23.37■■□□□ 1.33
COL15A1-205ENST00000610452 GJB2P29033 226 aa23.36■■□□□ 1.33
COL15A1-205ENST00000610452 HYPKQ9NX55 129 aa23.36■■□□□ 1.33
COL15A1-205ENST00000610452 G3V3G9 751 aa23.36■■□□□ 1.33
COL15A1-205ENST00000610452 SMARCA5O60264 1052 aaPredicted RBP23.36■■□□□ 1.33
COL15A1-205ENST00000610452 DCAF8Q5TAQ9 597 aa23.36■■□□□ 1.33
COL15A1-205ENST00000610452 RNF216Q9NWF9 866 aaPredicted RBP23.36■■□□□ 1.33
COL15A1-205ENST00000610452 PHACTR2O75167 634 aa23.36■■□□□ 1.33
COL15A1-205ENST00000610452 CCDC178Q5BJE1 867 aa23.36■■□□□ 1.33
COL15A1-205ENST00000610452 PPM1EQ8WY54 764 aa23.36■■□□□ 1.33
COL15A1-205ENST00000610452 SIL1Q9H173 461 aa23.36■■□□□ 1.33
COL15A1-205ENST00000610452 VPS37DQ86XT2 251 aa23.36■■□□□ 1.33
COL15A1-205ENST00000610452 TBC1D2BQ9UPU7 963 aa23.35■■□□□ 1.33
COL15A1-205ENST00000610452 TIAM1Q13009 1591 aa23.35■■□□□ 1.33
COL15A1-205ENST00000610452 OPA1O60313 960 aa23.35■■□□□ 1.33
COL15A1-205ENST00000610452 BANK1Q8NDB2 785 aa23.35■■□□□ 1.33
COL15A1-205ENST00000610452 DNA2P51530 1060 aa23.35■■□□□ 1.33
COL15A1-205ENST00000610452 SLC12A5Q9H2X9 1139 aa23.34■■□□□ 1.33
COL15A1-205ENST00000610452 EXOC6BQ9Y2D4 811 aa23.34■■□□□ 1.33
COL15A1-205ENST00000610452 TMX3Q96JJ7 454 aa23.34■■□□□ 1.33
COL15A1-205ENST00000610452 CCDC114Q96M63 670 aa23.34■■□□□ 1.33
COL15A1-205ENST00000610452 MYCBPQ99417 103 aaPredicted RBP23.34■■□□□ 1.33
COL15A1-205ENST00000610452 RBSNQ9H1K0 784 aa23.34■■□□□ 1.33
COL15A1-205ENST00000610452 RBM28Q9NW13 759 aaKnown RBP23.34■■□□□ 1.33
COL15A1-205ENST00000610452 ZSCAN22P10073 491 aaPredicted RBP23.34■■□□□ 1.33
COL15A1-205ENST00000610452 DMTNQ08495 405 aa23.34■■□□□ 1.33
COL15A1-205ENST00000610452 SPATA24Q86W54 205 aa23.34■■□□□ 1.33
COL15A1-205ENST00000610452 PIBF1Q8WXW3 757 aa23.34■■□□□ 1.33
COL15A1-205ENST00000610452 FYB1O15117 783 aa23.33■■□□□ 1.33
COL15A1-205ENST00000610452 SSH1Q8WYL5 1049 aa23.33■■□□□ 1.32
COL15A1-205ENST00000610452 CNPY2Q9Y2B0 182 aa23.33■■□□□ 1.32
COL15A1-205ENST00000610452 MTMR7Q9Y216 660 aa23.32■■□□□ 1.32
COL15A1-205ENST00000610452 RAB11FIP3O75154 756 aa23.32■■□□□ 1.32
COL15A1-205ENST00000610452 CKAP4Q07065 602 aaKnown RBP23.32■■□□□ 1.32
COL15A1-205ENST00000610452 AACSQ86V21 672 aa23.32■■□□□ 1.32
COL15A1-205ENST00000610452 JADE2Q9NQC1 790 aa23.32■■□□□ 1.32
COL15A1-205ENST00000610452 CCDC69A6NI79 296 aa23.32■■□□□ 1.32
COL15A1-205ENST00000610452 NUTM1Q86Y26 1132 aa23.32■■□□□ 1.32
COL15A1-205ENST00000610452 SEPT11Q9NVA2 429 aaKnown RBP23.32■■□□□ 1.32
COL15A1-205ENST00000610452 MATR3P43243 847 aaKnown RBP eCLIP23.32■■□□□ 1.32
COL15A1-205ENST00000610452 UBE4AQ14139 1066 aa23.32■■□□□ 1.32
COL15A1-205ENST00000610452 MAP2K2P36507 400 aa23.31■■□□□ 1.32
COL15A1-205ENST00000610452 ALS2CR12Q96Q35 445 aa23.31■■□□□ 1.32
COL15A1-205ENST00000610452 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP23.31■■□□□ 1.32
COL15A1-205ENST00000610452 SYT10Q6XYQ8 523 aa23.31■■□□□ 1.32
COL15A1-205ENST00000610452 LARP6Q9BRS8 491 aaKnown RBP23.31■■□□□ 1.32
COL15A1-205ENST00000610452 NAIPQ13075 1403 aa23.31■■□□□ 1.32
COL15A1-205ENST00000610452 SRGAP3O43295 1099 aa23.31■■□□□ 1.32
COL15A1-205ENST00000610452 CCDC6Q16204 474 aa23.31■■□□□ 1.32
COL15A1-205ENST00000610452 CEP63Q96MT8 703 aa23.31■■□□□ 1.32
COL15A1-205ENST00000610452 CEP131Q9UPN4 1083 aa23.31■■□□□ 1.32
COL15A1-205ENST00000610452 FKBP15Q5T1M5 1219 aa23.3■■□□□ 1.32
COL15A1-205ENST00000610452 DDX54Q8TDD1 881 aaKnown RBP23.3■■□□□ 1.32
COL15A1-205ENST00000610452 FBF1Q8TES7 1133 aa23.3■■□□□ 1.32
COL15A1-205ENST00000610452 PAIP2Q9BPZ3 127 aaKnown RBP23.3■■□□□ 1.32
COL15A1-205ENST00000610452 CNNM3Q8NE01 707 aa23.3■■□□□ 1.32
COL15A1-205ENST00000610452 ERBINQ96RT1 1412 aa23.3■■□□□ 1.32
COL15A1-205ENST00000610452 TUBB4BP68371 445 aa23.29■■□□□ 1.32
COL15A1-205ENST00000610452 UTP14CQ5TAP6 766 aaKnown RBP23.29■■□□□ 1.32
COL15A1-205ENST00000610452 UBASH3AP57075 661 aa23.29■■□□□ 1.32
COL15A1-205ENST00000610452 HDXQ7Z353 690 aa23.29■■□□□ 1.32
COL15A1-205ENST00000610452 GAS2L2Q8NHY3 880 aa23.29■■□□□ 1.32
COL15A1-205ENST00000610452 CLNS1AP54105 237 aaKnown RBP23.29■■□□□ 1.32
COL15A1-205ENST00000610452 KIF5BP33176 963 aa23.28■■□□□ 1.32
COL15A1-205ENST00000610452 EHBP1Q8NDI1 1231 aa23.28■■□□□ 1.32
COL15A1-205ENST00000610452 POLA1P09884 1462 aaPredicted RBP23.28■■□□□ 1.32
COL15A1-205ENST00000610452 CEP83Q9Y592 693 aa23.28■■□□□ 1.32
COL15A1-205ENST00000610452 DNAJC25Q9H1X3 360 aa23.28■■□□□ 1.32
COL15A1-205ENST00000610452 GUCY1B3Q02153 619 aa23.28■■□□□ 1.32
COL15A1-205ENST00000610452 WASF1Q92558 559 aa23.28■■□□□ 1.32
COL15A1-205ENST00000610452 CTNNA3Q9UI47 895 aa23.27■■□□□ 1.32
COL15A1-205ENST00000610452 ZBTB9Q96C00 473 aa23.27■■□□□ 1.32
COL15A1-205ENST00000610452 ZHX3Q9H4I2 956 aa23.27■■□□□ 1.32
COL15A1-205ENST00000610452 NUP133Q8WUM0 1156 aa23.27■■□□□ 1.32
COL15A1-205ENST00000610452 C8orf76Q96K31 380 aa23.27■■□□□ 1.32
COL15A1-205ENST00000610452 SYT1P21579 422 aa23.26■■□□□ 1.31
COL15A1-205ENST00000610452 CACNA2D4Q7Z3S7 1137 aa23.26■■□□□ 1.31
COL15A1-205ENST00000610452 BCL2L12Q9HB09 334 aa23.26■■□□□ 1.31
COL15A1-205ENST00000610452 C6orf163Q5TEZ5 329 aa23.26■■□□□ 1.31
COL15A1-205ENST00000610452 PIP4K2BP78356 416 aa23.26■■□□□ 1.31
COL15A1-205ENST00000610452 FAM76AQ8TAV0 307 aa23.26■■□□□ 1.31
COL15A1-205ENST00000610452 ZEB2O60315 1214 aa23.26■■□□□ 1.31
COL15A1-205ENST00000610452 TYRO3Q06418 890 aa23.26■■□□□ 1.31
COL15A1-205ENST00000610452 ANKS4BQ8N8V4 417 aa23.26■■□□□ 1.31
COL15A1-205ENST00000610452 NSRP1Q9H0G5 558 aaKnown RBP23.26■■□□□ 1.31
COL15A1-205ENST00000610452 GSTTP1A0A1W2PQM5 241 aa23.25■■□□□ 1.31
COL15A1-205ENST00000610452 CCDC57Q2TAC2 916 aa23.25■■□□□ 1.31
COL15A1-205ENST00000610452 GLRX3O76003 335 aaKnown RBP23.25■■□□□ 1.31
COL15A1-205ENST00000610452 DNAJC21Q5F1R6 531 aaKnown RBP23.25■■□□□ 1.31
COL15A1-205ENST00000610452 POTEDQ86YR6 584 aa23.25■■□□□ 1.31
COL15A1-205ENST00000610452 TUBBP07437 444 aa23.25■■□□□ 1.31
COL15A1-205ENST00000610452 ALDH1L2Q3SY69 923 aa23.25■■□□□ 1.31
COL15A1-205ENST00000610452 DACT1Q9NYF0 836 aa23.25■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms