RNA–Protein interactions for RNA: ENST00000610088.5

LINC01278-206, Transcript of long intergenic non-protein coding RNA 1278, humanhuman

TSL 4 BASIC

Gene LINC01278, Length 554 nt, Biotype sense overlapping, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01278-206ENST00000610088 NFKBIEO00221 500 aa17.7■□□□□ 0.42
LINC01278-206ENST00000610088 ERFEQ4G0M1 354 aa17.7■□□□□ 0.42
LINC01278-206ENST00000610088 KDRP35968 1356 aa17.69■□□□□ 0.42
LINC01278-206ENST00000610088 POLRMTO00411 1230 aaKnown RBP17.69■□□□□ 0.42
LINC01278-206ENST00000610088 TTLL6Q8N841 843 aa17.69■□□□□ 0.42
LINC01278-206ENST00000610088 DDNO94850 711 aaPredicted RBP17.68■□□□□ 0.42
LINC01278-206ENST00000610088 DEFB115Q30KQ5 88 aa17.68■□□□□ 0.42
LINC01278-206ENST00000610088 TNRC18O15417 2968 aaPredicted RBP17.68■□□□□ 0.42
LINC01278-206ENST00000610088 TNNT2P45379 298 aaPredicted RBP17.67■□□□□ 0.42
LINC01278-206ENST00000610088 LDHDQ86WU2 507 aa17.67■□□□□ 0.42
LINC01278-206ENST00000610088 PANK3Q9H999 370 aa17.67■□□□□ 0.42
LINC01278-206ENST00000610088 EMILIN1Q9Y6C2 1016 aa17.67■□□□□ 0.42
LINC01278-206ENST00000610088 WDR33Q9C0J8 1336 aaKnown RBP17.67■□□□□ 0.42
LINC01278-206ENST00000610088 USP42Q9H9J4 1324 aaKnown RBP17.67■□□□□ 0.42
LINC01278-206ENST00000610088 VIRMAQ69YN4 1812 aaKnown RBP17.66■□□□□ 0.42
LINC01278-206ENST00000610088 BEGAINQ9BUH8 593 aa17.66■□□□□ 0.42
LINC01278-206ENST00000610088 ZNF219Q9P2Y4 722 aaPredicted RBP17.66■□□□□ 0.42
LINC01278-206ENST00000610088 CCDC88AQ3V6T2 1871 aa17.66■□□□□ 0.42
LINC01278-206ENST00000610088 C2CD5Q86YS7 1000 aa17.65■□□□□ 0.42
LINC01278-206ENST00000610088 IFNL2Q8IZJ0 200 aa17.65■□□□□ 0.42
LINC01278-206ENST00000610088 RASSF10A6NK89 507 aa17.64■□□□□ 0.41
LINC01278-206ENST00000610088 PHKG2P15735 406 aa17.64■□□□□ 0.41
LINC01278-206ENST00000610088 TM4SF1P30408 202 aa17.64■□□□□ 0.41
LINC01278-206ENST00000610088 EAPPQ56P03 285 aaPredicted RBP17.64■□□□□ 0.41
LINC01278-206ENST00000610088 TSKSQ9UJT2 592 aa17.64■□□□□ 0.41
LINC01278-206ENST00000610088 ABT1Q9ULW3 272 aaKnown RBP17.64■□□□□ 0.41
LINC01278-206ENST00000610088 CLEC11AQ9Y240 323 aa17.64■□□□□ 0.41
LINC01278-206ENST00000610088 CRKLP46109 303 aaKnown RBP17.63■□□□□ 0.41
LINC01278-206ENST00000610088 PAXIP1Q6ZW49 1069 aaPredicted RBP17.63■□□□□ 0.41
LINC01278-206ENST00000610088 PDE4DIPQ5VU43 2346 aa17.63■□□□□ 0.41
LINC01278-206ENST00000610088 IQCA1LA6NCM1 817 aa17.62■□□□□ 0.41
LINC01278-206ENST00000610088 ZPR1O75312 459 aa17.62■□□□□ 0.41
LINC01278-206ENST00000610088 ITGBL1O95965 494 aaPredicted RBP17.62■□□□□ 0.41
LINC01278-206ENST00000610088 GRM1Q13255 1194 aa17.62■□□□□ 0.41
LINC01278-206ENST00000610088 MCOLN1Q9GZU1 580 aa17.62■□□□□ 0.41
LINC01278-206ENST00000610088 KNSTRNQ9Y448 316 aa17.62■□□□□ 0.41
LINC01278-206ENST00000610088 WASHC2AQ641Q2 1341 aa17.62■□□□□ 0.41
LINC01278-206ENST00000610088 H0YIN7 160 aa17.61■□□□□ 0.41
LINC01278-206ENST00000610088 PTCD1O75127 700 aaKnown RBP17.61■□□□□ 0.41
LINC01278-206ENST00000610088 USPL1Q5W0Q7 1092 aa17.61■□□□□ 0.41
LINC01278-206ENST00000610088 MORC1Q86VD1 984 aa17.61■□□□□ 0.41
LINC01278-206ENST00000610088 TAF1DQ9H5J8 278 aaPredicted RBP17.61■□□□□ 0.41
LINC01278-206ENST00000610088 C21orf2O43822 256 aa17.6■□□□□ 0.41
LINC01278-206ENST00000610088 POLKQ9UBT6 870 aa17.6■□□□□ 0.41
LINC01278-206ENST00000610088 COL5A3P25940 1745 aaPredicted RBP17.6■□□□□ 0.41
LINC01278-206ENST00000610088 MYH14Q7Z406 1995 aaKnown RBP17.6■□□□□ 0.41
LINC01278-206ENST00000610088 ZNF622Q969S3 477 aaKnown RBP eCLIP17.59■□□□□ 0.41
LINC01278-206ENST00000610088 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP17.58■□□□□ 0.4
LINC01278-206ENST00000610088 NFIXQ14938 502 aa17.57■□□□□ 0.4
LINC01278-206ENST00000610088 TAOK3Q9H2K8 898 aa17.57■□□□□ 0.4
LINC01278-206ENST00000610088 ERVV-2B6SEH9 535 aa17.56■□□□□ 0.4
LINC01278-206ENST00000610088 SERPINB2P05120 415 aa17.56■□□□□ 0.4
LINC01278-206ENST00000610088 MAP1SQ66K74 1059 aaPredicted RBP17.56■□□□□ 0.4
LINC01278-206ENST00000610088 CNTROBQ8N137 903 aa17.56■□□□□ 0.4
LINC01278-206ENST00000610088 CAPNS2Q96L46 248 aa17.56■□□□□ 0.4
LINC01278-206ENST00000610088 ZNF831Q5JPB2 1677 aa17.55■□□□□ 0.4
LINC01278-206ENST00000610088 KIF7Q2M1P5 1343 aa17.55■□□□□ 0.4
LINC01278-206ENST00000610088 CABP4P57796 275 aa17.55■□□□□ 0.4
LINC01278-206ENST00000610088 DGKZQ13574 1117 aa17.55■□□□□ 0.4
LINC01278-206ENST00000610088 GPR101Q96P66 508 aaPredicted RBP17.55■□□□□ 0.4
LINC01278-206ENST00000610088 EYA1Q99502 592 aa17.55■□□□□ 0.4
LINC01278-206ENST00000610088 CYP4F22Q6NT55 531 aa17.54■□□□□ 0.4
LINC01278-206ENST00000610088 ECE1P42892 770 aa17.53■□□□□ 0.4
LINC01278-206ENST00000610088 EIF4A2Q14240 407 aaKnown RBP17.53■□□□□ 0.4
LINC01278-206ENST00000610088 PRPF38BQ5VTL8 546 aaKnown RBP17.53■□□□□ 0.4
LINC01278-206ENST00000610088 INTS5Q6P9B9 1019 aaKnown RBP17.53■□□□□ 0.4
LINC01278-206ENST00000610088 L3MBTL3Q96JM7 780 aaPredicted RBP17.53■□□□□ 0.4
LINC01278-206ENST00000610088 HACL1Q9UJ83 578 aa17.53■□□□□ 0.4
LINC01278-206ENST00000610088 DLEC1Q9Y238 1755 aa17.53■□□□□ 0.4
LINC01278-206ENST00000610088 CARMIL3Q8ND23 1372 aa17.53■□□□□ 0.4
LINC01278-206ENST00000610088 SOX10P56693 466 aa17.52■□□□□ 0.4
LINC01278-206ENST00000610088 NCAPD2Q15021 1401 aa17.52■□□□□ 0.4
LINC01278-206ENST00000610088 DICER1Q9UPY3 1922 aaKnown RBP17.52■□□□□ 0.4
LINC01278-206ENST00000610088 AFDNP55196 1824 aaKnown RBP17.51■□□□□ 0.39
LINC01278-206ENST00000610088 EPHX2P34913 555 aa17.51■□□□□ 0.39
LINC01278-206ENST00000610088 BICDL1Q6ZP65 573 aa17.51■□□□□ 0.39
LINC01278-206ENST00000610088 HSP90AB1P08238 724 aaKnown RBP17.5■□□□□ 0.39
LINC01278-206ENST00000610088 LTBP3Q9NS15 1303 aa17.49■□□□□ 0.39
LINC01278-206ENST00000610088 AOC2O75106 756 aa17.49■□□□□ 0.39
LINC01278-206ENST00000610088 DDX21Q9NR30 783 aaKnown RBP eCLIP17.49■□□□□ 0.39
LINC01278-206ENST00000610088 NARFQ9UHQ1 456 aa17.49■□□□□ 0.39
LINC01278-206ENST00000610088 SCN4AP35499 1836 aa17.49■□□□□ 0.39
LINC01278-206ENST00000610088 PNMA8AQ86V59 439 aaPredicted RBP17.48■□□□□ 0.39
LINC01278-206ENST00000610088 CCDC24Q8N4L8 307 aa17.48■□□□□ 0.39
LINC01278-206ENST00000610088 SOS1Q07889 1333 aaPredicted RBP17.47■□□□□ 0.39
LINC01278-206ENST00000610088 ZNF541Q9H0D2 1346 aa17.47■□□□□ 0.39
LINC01278-206ENST00000610088 FMR1Q06787 632 aaKnown RBP eCLIP17.47■□□□□ 0.39
LINC01278-206ENST00000610088 CNGB1Q14028 1251 aaPredicted RBP17.47■□□□□ 0.39
LINC01278-206ENST00000610088 PLEKHO1Q53GL0 409 aaPredicted RBP17.47■□□□□ 0.39
LINC01278-206ENST00000610088 CC2D1BQ5T0F9 858 aaKnown RBP17.47■□□□□ 0.39
LINC01278-206ENST00000610088 FER1L6Q2WGJ9 1857 aa17.47■□□□□ 0.39
LINC01278-206ENST00000610088 RNF123Q5XPI4 1314 aa17.47■□□□□ 0.39
LINC01278-206ENST00000610088 PDE6BP35913 854 aa17.46■□□□□ 0.39
LINC01278-206ENST00000610088 AMER1Q5JTC6 1135 aaPredicted RBP17.46■□□□□ 0.39
LINC01278-206ENST00000610088 DNAJC10Q8IXB1 793 aa17.46■□□□□ 0.39
LINC01278-206ENST00000610088 BCL2L12Q9HB09 334 aa17.46■□□□□ 0.39
LINC01278-206ENST00000610088 NRXN2Q9P2S2 1712 aa17.46■□□□□ 0.39
LINC01278-206ENST00000610088 CASP8AP2Q9UKL3 1982 aa17.46■□□□□ 0.39
LINC01278-206ENST00000610088 ZNF530Q6P9A1 599 aaPredicted RBP17.45■□□□□ 0.38
LINC01278-206ENST00000610088 NFATC2IPQ8NCF5 419 aa17.45■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 61.6 ms