RNA–Protein interactions for RNA: ENST00000609795.5

HNF4A-208, Transcript of hepatocyte nuclear factor 4 alpha, humanhuman

TSL 1 (best) BASIC

Gene HNF4A, Length 1,192 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNF4A-208ENST00000609795 KRT24Q2M2I5 525 aa23.26■■□□□ 1.31
HNF4A-208ENST00000609795 INTS5Q6P9B9 1019 aaKnown RBP23.26■■□□□ 1.31
HNF4A-208ENST00000609795 LAMB4A4D0S4 1761 aa23.25■■□□□ 1.31
HNF4A-208ENST00000609795 R3HDM1Q15032 1099 aaKnown RBP23.25■■□□□ 1.31
HNF4A-208ENST00000609795 CCDC87Q9NVE4 849 aa23.25■■□□□ 1.31
HNF4A-208ENST00000609795 FANCIQ9NVI1 1328 aa23.25■■□□□ 1.31
HNF4A-208ENST00000609795 E9PSI1 815 aa23.24■■□□□ 1.31
HNF4A-208ENST00000609795 GNPATO15228 680 aa23.24■■□□□ 1.31
HNF4A-208ENST00000609795 UBR3Q6ZT12 1888 aa23.24■■□□□ 1.31
HNF4A-208ENST00000609795 QSER1Q2KHR3 1735 aa23.23■■□□□ 1.31
HNF4A-208ENST00000609795 RPS6KA4O75676 772 aa23.23■■□□□ 1.31
HNF4A-208ENST00000609795 A1BGP04217 495 aa23.23■■□□□ 1.31
HNF4A-208ENST00000609795 SLFN5Q08AF3 891 aa23.23■■□□□ 1.31
HNF4A-208ENST00000609795 DUSP27Q5VZP5 1158 aa23.23■■□□□ 1.31
HNF4A-208ENST00000609795 C8orf58Q8NAV2 365 aa23.23■■□□□ 1.31
HNF4A-208ENST00000609795 TUBGCP6Q96RT7 1819 aa23.23■■□□□ 1.31
HNF4A-208ENST00000609795 HOXB7P09629 217 aa23.22■■□□□ 1.31
HNF4A-208ENST00000609795 CDCA7LQ96GN5 454 aa23.22■■□□□ 1.31
HNF4A-208ENST00000609795 RTCBQ9Y3I0 505 aaKnown RBP23.22■■□□□ 1.31
HNF4A-208ENST00000609795 PSDA5PKW4 1024 aaPredicted RBP23.21■■□□□ 1.31
HNF4A-208ENST00000609795 ELL2O00472 640 aaPredicted RBP23.21■■□□□ 1.31
HNF4A-208ENST00000609795 CANXP27824 592 aaKnown RBP23.21■■□□□ 1.31
HNF4A-208ENST00000609795 ZBTB1Q9Y2K1 713 aa23.21■■□□□ 1.31
HNF4A-208ENST00000609795 ZBED9Q6R2W3 1325 aa23.21■■□□□ 1.31
HNF4A-208ENST00000609795 PNPLA7Q6ZV29 1317 aa23.2■■□□□ 1.3
HNF4A-208ENST00000609795 EIF2S2P20042 333 aaKnown RBP23.2■■□□□ 1.3
HNF4A-208ENST00000609795 FLAD1Q8NFF5 587 aa23.2■■□□□ 1.3
HNF4A-208ENST00000609795 SOS1Q07889 1333 aaPredicted RBP23.19■■□□□ 1.3
HNF4A-208ENST00000609795 SSFA2P28290 1259 aa23.19■■□□□ 1.3
HNF4A-208ENST00000609795 EXOSC9Q06265 439 aaKnown RBP23.19■■□□□ 1.3
HNF4A-208ENST00000609795 AMIGO3Q86WK7 504 aa23.19■■□□□ 1.3
HNF4A-208ENST00000609795 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP23.18■■□□□ 1.3
HNF4A-208ENST00000609795 PHF14O94880 888 aa23.18■■□□□ 1.3
HNF4A-208ENST00000609795 TRAPPC3LQ5T215 181 aa23.18■■□□□ 1.3
HNF4A-208ENST00000609795 SMIM5Q71RC9 77 aa23.18■■□□□ 1.3
HNF4A-208ENST00000609795 TRMT2AQ8IZ69 625 aaKnown RBP23.18■■□□□ 1.3
HNF4A-208ENST00000609795 TSPYL6Q8N831 410 aa23.18■■□□□ 1.3
HNF4A-208ENST00000609795 ADRA2BP18089 450 aa23.17■■□□□ 1.3
HNF4A-208ENST00000609795 IL6STP40189 918 aaPredicted RBP23.17■■□□□ 1.3
HNF4A-208ENST00000609795 TWISTNBQ3B726 338 aaPredicted RBP23.17■■□□□ 1.3
HNF4A-208ENST00000609795 COL23A1Q86Y22 540 aaPredicted RBP23.17■■□□□ 1.3
HNF4A-208ENST00000609795 ERBB4Q15303 1308 aa23.16■■□□□ 1.3
HNF4A-208ENST00000609795 NBPF26B4DH59 902 aa23.16■■□□□ 1.3
HNF4A-208ENST00000609795 PIP4K2AP48426 406 aaPredicted RBP23.16■■□□□ 1.3
HNF4A-208ENST00000609795 EIF5P55010 431 aaKnown RBP23.16■■□□□ 1.3
HNF4A-208ENST00000609795 HDGFL1Q5TGJ6 251 aa23.16■■□□□ 1.3
HNF4A-208ENST00000609795 NBPF10Q6P3W6 841 aaKnown RBP23.16■■□□□ 1.3
HNF4A-208ENST00000609795 NBPF15Q8N660 670 aa23.16■■□□□ 1.3
HNF4A-208ENST00000609795 NECTIN2Q92692 538 aa23.16■■□□□ 1.3
HNF4A-208ENST00000609795 CHMP4AQ9BY43 222 aa23.16■■□□□ 1.3
HNF4A-208ENST00000609795 MSH5O43196 834 aa23.15■■□□□ 1.3
HNF4A-208ENST00000609795 ARHGEF1Q92888 912 aaKnown RBP23.15■■□□□ 1.3
HNF4A-208ENST00000609795 PDGFDQ9GZP0 370 aaPredicted RBP23.15■■□□□ 1.3
HNF4A-208ENST00000609795 VAMP4O75379 141 aa23.13■■□□□ 1.29
HNF4A-208ENST00000609795 RFC4P35249 363 aa23.13■■□□□ 1.29
HNF4A-208ENST00000609795 NPM2Q86SE8 214 aaKnown RBP23.13■■□□□ 1.29
HNF4A-208ENST00000609795 ZNF330Q9Y3S2 320 aaPredicted RBP23.13■■□□□ 1.29
HNF4A-208ENST00000609795 CASZ1Q86V15 1759 aa23.13■■□□□ 1.29
HNF4A-208ENST00000609795 A0A087WZG4 1122 aa23.12■■□□□ 1.29
HNF4A-208ENST00000609795 MYL6BP14649 208 aa23.12■■□□□ 1.29
HNF4A-208ENST00000609795 PDIA6Q15084 440 aa23.12■■□□□ 1.29
HNF4A-208ENST00000609795 COL15A1P39059 1388 aa23.12■■□□□ 1.29
HNF4A-208ENST00000609795 C4AP0C0L4 1744 aa23.11■■□□□ 1.29
HNF4A-208ENST00000609795 CCDC30Q5VVM6 783 aa23.11■■□□□ 1.29
HNF4A-208ENST00000609795 SLC16A10Q8TF71 515 aa23.11■■□□□ 1.29
HNF4A-208ENST00000609795 DDX21Q9NR30 783 aaKnown RBP eCLIP23.11■■□□□ 1.29
HNF4A-208ENST00000609795 DBF4Q9UBU7 674 aaPredicted RBP23.11■■□□□ 1.29
HNF4A-208ENST00000609795 YTHDC1Q96MU7 727 aaKnown RBP23.1■■□□□ 1.29
HNF4A-208ENST00000609795 CHPF2Q9P2E5 772 aa23.1■■□□□ 1.29
HNF4A-208ENST00000609795 PROSER3Q2NL68 480 aa23.09■■□□□ 1.29
HNF4A-208ENST00000609795 ARXQ96QS3 562 aa23.09■■□□□ 1.29
HNF4A-208ENST00000609795 ANXA1P04083 346 aa23.08■■□□□ 1.29
HNF4A-208ENST00000609795 NARFQ9UHQ1 456 aa23.08■■□□□ 1.29
HNF4A-208ENST00000609795 ZPR1O75312 459 aa23.07■■□□□ 1.28
HNF4A-208ENST00000609795 LRP10Q7Z4F1 713 aa23.07■■□□□ 1.28
HNF4A-208ENST00000609795 DZIP3Q86Y13 1208 aaKnown RBP23.07■■□□□ 1.28
HNF4A-208ENST00000609795 HYPKQ9NX55 129 aa23.07■■□□□ 1.28
HNF4A-208ENST00000609795 TBC1D2BQ9UPU7 963 aa23.07■■□□□ 1.28
HNF4A-208ENST00000609795 USP42Q9H9J4 1324 aaKnown RBP23.07■■□□□ 1.28
HNF4A-208ENST00000609795 ZBTB7AO95365 584 aa23.06■■□□□ 1.28
HNF4A-208ENST00000609795 STK31Q9BXU1 1019 aa23.06■■□□□ 1.28
HNF4A-208ENST00000609795 MTFR1LQ9H019 292 aa23.06■■□□□ 1.28
HNF4A-208ENST00000609795 SRP68Q9UHB9 627 aaKnown RBP23.06■■□□□ 1.28
HNF4A-208ENST00000609795 TCERG1O14776 1098 aaKnown RBP23.05■■□□□ 1.28
HNF4A-208ENST00000609795 CT47B1P0C2W7 299 aaPredicted RBP23.04■■□□□ 1.28
HNF4A-208ENST00000609795 USPL1Q5W0Q7 1092 aa23.04■■□□□ 1.28
HNF4A-208ENST00000609795 CACNA1FO60840 1977 aa23.03■■□□□ 1.28
HNF4A-208ENST00000609795 SLC4A2P04920 1241 aa23.03■■□□□ 1.28
HNF4A-208ENST00000609795 GYS1P13807 737 aa23.03■■□□□ 1.28
HNF4A-208ENST00000609795 TTLL7Q6ZT98 887 aa23.03■■□□□ 1.28
HNF4A-208ENST00000609795 COPS6Q7L5N1 327 aa23.03■■□□□ 1.28
HNF4A-208ENST00000609795 NLGN1Q8N2Q7 840 aa23.03■■□□□ 1.28
HNF4A-208ENST00000609795 XAGE3Q8WTP9 111 aa23.03■■□□□ 1.28
HNF4A-208ENST00000609795 ZNF428Q96B54 188 aa23.03■■□□□ 1.28
HNF4A-208ENST00000609795 ATF5Q9Y2D1 282 aaPredicted RBP23.03■■□□□ 1.28
HNF4A-208ENST00000609795 CAMTA2O94983 1202 aa23.02■■□□□ 1.28
HNF4A-208ENST00000609795 AIMP1Q12904 312 aaKnown RBP23.02■■□□□ 1.28
HNF4A-208ENST00000609795 KIF6Q6ZMV9 814 aa23.02■■□□□ 1.28
HNF4A-208ENST00000609795 MSL1Q68DK7 614 aa23.01■■□□□ 1.27
HNF4A-208ENST00000609795 PHAXQ9H814 394 aaKnown RBP23.01■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms