RNA–Protein interactions for RNA: ENST00000609606.5

CSNK2A1-209, Transcript of casein kinase 2 alpha 1, humanhuman

TSL 2

Gene CSNK2A1, Length 589 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK2A1-209ENST00000609606 CRKLP46109 303 aaKnown RBP19.56■□□□□ 0.72
CSNK2A1-209ENST00000609606 GNAI1P63096 354 aa19.56■□□□□ 0.72
CSNK2A1-209ENST00000609606 FLAD1Q8NFF5 587 aa19.56■□□□□ 0.72
CSNK2A1-209ENST00000609606 PNPLA7Q6ZV29 1317 aa19.55■□□□□ 0.72
CSNK2A1-209ENST00000609606 SSFA2P28290 1259 aa19.55■□□□□ 0.72
CSNK2A1-209ENST00000609606 WDR63Q8IWG1 891 aa19.55■□□□□ 0.72
CSNK2A1-209ENST00000609606 GNPATO15228 680 aa19.54■□□□□ 0.72
CSNK2A1-209ENST00000609606 GIGYF1O75420 1035 aaPredicted RBP19.54■□□□□ 0.72
CSNK2A1-209ENST00000609606 RPS6KA4O75676 772 aa19.54■□□□□ 0.72
CSNK2A1-209ENST00000609606 INTS5Q6P9B9 1019 aaKnown RBP19.54■□□□□ 0.72
CSNK2A1-209ENST00000609606 CCDC87Q9NVE4 849 aa19.54■□□□□ 0.72
CSNK2A1-209ENST00000609606 LAS1LQ9Y4W2 734 aaKnown RBP19.54■□□□□ 0.72
CSNK2A1-209ENST00000609606 SENP3-EIF4A1A0A087X0R7 540 aa19.53■□□□□ 0.72
CSNK2A1-209ENST00000609606 RTCBQ9Y3I0 505 aaKnown RBP19.53■□□□□ 0.72
CSNK2A1-209ENST00000609606 AMIGO3Q86WK7 504 aa19.52■□□□□ 0.72
CSNK2A1-209ENST00000609606 SLC16A10Q8TF71 515 aa19.52■□□□□ 0.72
CSNK2A1-209ENST00000609606 MBIPQ9NS73 344 aa19.52■□□□□ 0.72
CSNK2A1-209ENST00000609606 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.51■□□□□ 0.71
CSNK2A1-209ENST00000609606 COL23A1Q86Y22 540 aaPredicted RBP19.51■□□□□ 0.71
CSNK2A1-209ENST00000609606 PDGFDQ9GZP0 370 aaPredicted RBP19.51■□□□□ 0.71
CSNK2A1-209ENST00000609606 SALL2Q9Y467 1007 aaPredicted RBP19.51■□□□□ 0.71
CSNK2A1-209ENST00000609606 USP16Q9Y5T5 823 aa19.51■□□□□ 0.71
CSNK2A1-209ENST00000609606 ZNF521Q96K83 1311 aa19.51■□□□□ 0.71
CSNK2A1-209ENST00000609606 PRAMEF22A3QJZ6 481 aa19.5■□□□□ 0.71
CSNK2A1-209ENST00000609606 C4AP0C0L4 1744 aa19.5■□□□□ 0.71
CSNK2A1-209ENST00000609606 COL24A1Q17RW2 1714 aa19.5■□□□□ 0.71
CSNK2A1-209ENST00000609606 SOS1Q07889 1333 aaPredicted RBP19.5■□□□□ 0.71
CSNK2A1-209ENST00000609606 TRAPPC3LQ5T215 181 aa19.49■□□□□ 0.71
CSNK2A1-209ENST00000609606 ZBTB1Q9Y2K1 713 aa19.49■□□□□ 0.71
CSNK2A1-209ENST00000609606 HOXB7P09629 217 aa19.48■□□□□ 0.71
CSNK2A1-209ENST00000609606 PHF14O94880 888 aa19.47■□□□□ 0.71
CSNK2A1-209ENST00000609606 A1BGP04217 495 aa19.47■□□□□ 0.71
CSNK2A1-209ENST00000609606 IL6STP40189 918 aaPredicted RBP19.47■□□□□ 0.71
CSNK2A1-209ENST00000609606 MTFR1LQ9H019 292 aa19.47■□□□□ 0.71
CSNK2A1-209ENST00000609606 LRP5O75197 1615 aa19.47■□□□□ 0.71
CSNK2A1-209ENST00000609606 CANXP27824 592 aaKnown RBP19.46■□□□□ 0.71
CSNK2A1-209ENST00000609606 EIF5P55010 431 aaKnown RBP19.46■□□□□ 0.71
CSNK2A1-209ENST00000609606 ARHGEF1Q92888 912 aaKnown RBP19.46■□□□□ 0.71
CSNK2A1-209ENST00000609606 ERBB4Q15303 1308 aa19.46■□□□□ 0.71
CSNK2A1-209ENST00000609606 COL15A1P39059 1388 aa19.45■□□□□ 0.7
CSNK2A1-209ENST00000609606 SMIM5Q71RC9 77 aa19.45■□□□□ 0.7
CSNK2A1-209ENST00000609606 ZBTB7AO95365 584 aa19.44■□□□□ 0.7
CSNK2A1-209ENST00000609606 RFC4P35249 363 aa19.44■□□□□ 0.7
CSNK2A1-209ENST00000609606 KRT24Q2M2I5 525 aa19.44■□□□□ 0.7
CSNK2A1-209ENST00000609606 DUSP27Q5VZP5 1158 aa19.44■□□□□ 0.7
CSNK2A1-209ENST00000609606 TSR2Q969E8 191 aaKnown RBP19.44■□□□□ 0.7
CSNK2A1-209ENST00000609606 SPON1Q9HCB6 807 aa19.44■□□□□ 0.7
CSNK2A1-209ENST00000609606 A0A087WZG4 1122 aa19.43■□□□□ 0.7
CSNK2A1-209ENST00000609606 NBPF26B4DH59 902 aa19.43■□□□□ 0.7
CSNK2A1-209ENST00000609606 NBPF10Q6P3W6 841 aaKnown RBP19.43■□□□□ 0.7
CSNK2A1-209ENST00000609606 NBPF15Q8N660 670 aa19.43■□□□□ 0.7
CSNK2A1-209ENST00000609606 MYH16Q9H6N6 1097 aa19.43■□□□□ 0.7
CSNK2A1-209ENST00000609606 FANCIQ9NVI1 1328 aa19.43■□□□□ 0.7
CSNK2A1-209ENST00000609606 GOLGA2Q08379 1002 aa19.42■□□□□ 0.7
CSNK2A1-209ENST00000609606 USP42Q9H9J4 1324 aaKnown RBP19.42■□□□□ 0.7
CSNK2A1-209ENST00000609606 SRCAPQ6ZRS2 3230 aa19.41■□□□□ 0.7
CSNK2A1-209ENST00000609606 C8orf58Q8NAV2 365 aa19.41■□□□□ 0.7
CSNK2A1-209ENST00000609606 CHMP4AQ9BY43 222 aa19.41■□□□□ 0.7
CSNK2A1-209ENST00000609606 SPINK5Q9NQ38 1064 aaPredicted RBP19.41■□□□□ 0.7
CSNK2A1-209ENST00000609606 NARFQ9UHQ1 456 aa19.41■□□□□ 0.7
CSNK2A1-209ENST00000609606 EIF2S2P20042 333 aaKnown RBP19.4■□□□□ 0.7
CSNK2A1-209ENST00000609606 NPM2Q86SE8 214 aaKnown RBP19.4■□□□□ 0.7
CSNK2A1-209ENST00000609606 SGIP1Q9BQI5 828 aa19.4■□□□□ 0.7
CSNK2A1-209ENST00000609606 ATF5Q9Y2D1 282 aaPredicted RBP19.4■□□□□ 0.7
CSNK2A1-209ENST00000609606 SCN7AQ01118 1682 aa19.4■□□□□ 0.7
CSNK2A1-209ENST00000609606 E9PSI1 815 aa19.39■□□□□ 0.69
CSNK2A1-209ENST00000609606 ZPR1O75312 459 aa19.39■□□□□ 0.69
CSNK2A1-209ENST00000609606 GYS1P13807 737 aa19.39■□□□□ 0.69
CSNK2A1-209ENST00000609606 PTGER2P43116 358 aa19.39■□□□□ 0.69
CSNK2A1-209ENST00000609606 HDGFL1Q5TGJ6 251 aa19.39■□□□□ 0.69
CSNK2A1-209ENST00000609606 BCORQ6W2J9 1755 aa19.39■□□□□ 0.69
CSNK2A1-209ENST00000609606 CACNA1FO60840 1977 aa19.39■□□□□ 0.69
CSNK2A1-209ENST00000609606 PIP4K2AP48426 406 aaPredicted RBP19.38■□□□□ 0.69
CSNK2A1-209ENST00000609606 PDIA6Q15084 440 aa19.38■□□□□ 0.69
CSNK2A1-209ENST00000609606 NLGN1Q8N2Q7 840 aa19.38■□□□□ 0.69
CSNK2A1-209ENST00000609606 RGL2O15211 777 aa19.37■□□□□ 0.69
CSNK2A1-209ENST00000609606 HNRNPUQ00839 825 aaKnown RBP eCLIP19.37■□□□□ 0.69
CSNK2A1-209ENST00000609606 SLFN5Q08AF3 891 aa19.37■□□□□ 0.69
CSNK2A1-209ENST00000609606 TSPYL6Q8N831 410 aa19.37■□□□□ 0.69
CSNK2A1-209ENST00000609606 DDX21Q9NR30 783 aaKnown RBP eCLIP19.37■□□□□ 0.69
CSNK2A1-209ENST00000609606 SRP68Q9UHB9 627 aaKnown RBP19.37■□□□□ 0.69
CSNK2A1-209ENST00000609606 ZNF330Q9Y3S2 320 aaPredicted RBP19.37■□□□□ 0.69
CSNK2A1-209ENST00000609606 ELL2O00472 640 aaPredicted RBP19.36■□□□□ 0.69
CSNK2A1-209ENST00000609606 POLD1P28340 1107 aa19.36■□□□□ 0.69
CSNK2A1-209ENST00000609606 TWISTNBQ3B726 338 aaPredicted RBP19.36■□□□□ 0.69
CSNK2A1-209ENST00000609606 MSL1Q68DK7 614 aa19.36■□□□□ 0.69
CSNK2A1-209ENST00000609606 LRP10Q7Z4F1 713 aa19.36■□□□□ 0.69
CSNK2A1-209ENST00000609606 DZIP3Q86Y13 1208 aaKnown RBP19.36■□□□□ 0.69
CSNK2A1-209ENST00000609606 DBF4Q9UBU7 674 aaPredicted RBP19.36■□□□□ 0.69
CSNK2A1-209ENST00000609606 MYL6BP14649 208 aa19.35■□□□□ 0.69
CSNK2A1-209ENST00000609606 USPL1Q5W0Q7 1092 aa19.35■□□□□ 0.69
CSNK2A1-209ENST00000609606 TBC1D2BQ9UPU7 963 aa19.35■□□□□ 0.69
CSNK2A1-209ENST00000609606 CAMTA2O94983 1202 aa19.34■□□□□ 0.69
CSNK2A1-209ENST00000609606 EXOSC9Q06265 439 aaKnown RBP19.34■□□□□ 0.69
CSNK2A1-209ENST00000609606 FKBP8Q14318 412 aa19.34■□□□□ 0.69
CSNK2A1-209ENST00000609606 PROSER3Q2NL68 480 aa19.34■□□□□ 0.69
CSNK2A1-209ENST00000609606 CCDC30Q5VVM6 783 aa19.34■□□□□ 0.69
CSNK2A1-209ENST00000609606 TRMT2AQ8IZ69 625 aaKnown RBP19.34■□□□□ 0.69
CSNK2A1-209ENST00000609606 NECTIN2Q92692 538 aa19.34■□□□□ 0.69
CSNK2A1-209ENST00000609606 BCL2L12Q9HB09 334 aa19.34■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms