RNA–Protein interactions for RNA: ENST00000606499.1

MSH6-211, Transcript of mutS homolog 6, humanhuman

TSL 3

Gene MSH6, Length 833 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-211ENST00000606499 CCDC125Q86Z20 511 aa9.93□□□□□ -0.82
MSH6-211ENST00000606499 VSIG10Q8N0Z9 540 aa9.93□□□□□ -0.82
MSH6-211ENST00000606499 LINC00116Q8NCU8 138 aa9.93□□□□□ -0.82
MSH6-211ENST00000606499 NECTIN2Q92692 538 aa9.93□□□□□ -0.82
MSH6-211ENST00000606499 CAMKK2Q96RR4 588 aa9.93□□□□□ -0.82
MSH6-211ENST00000606499 QSER1Q2KHR3 1735 aa9.93□□□□□ -0.82
MSH6-211ENST00000606499 CYP19A1P11511 503 aaPredicted RBP9.92□□□□□ -0.82
MSH6-211ENST00000606499 SLC27A3Q5K4L6 730 aa9.92□□□□□ -0.82
MSH6-211ENST00000606499 HDGFL1Q5TGJ6 251 aa9.92□□□□□ -0.82
MSH6-211ENST00000606499 USP16Q9Y5T5 823 aa9.92□□□□□ -0.82
MSH6-211ENST00000606499 BCORQ6W2J9 1755 aa9.91□□□□□ -0.82
MSH6-211ENST00000606499 SCN7AQ01118 1682 aa9.91□□□□□ -0.82
MSH6-211ENST00000606499 TCERG1O14776 1098 aaKnown RBP9.91□□□□□ -0.82
MSH6-211ENST00000606499 VAMP4O75379 141 aa9.91□□□□□ -0.82
MSH6-211ENST00000606499 HOXB7P09629 217 aa9.91□□□□□ -0.82
MSH6-211ENST00000606499 EIF2S2P20042 333 aaKnown RBP9.91□□□□□ -0.82
MSH6-211ENST00000606499 PIP4K2AP48426 406 aaPredicted RBP9.91□□□□□ -0.82
MSH6-211ENST00000606499 ARFGEF2Q9Y6D5 1785 aa9.91□□□□□ -0.82
MSH6-211ENST00000606499 SOS1Q07889 1333 aaPredicted RBP9.9□□□□□ -0.82
MSH6-211ENST00000606499 STARD3NLO95772 234 aa9.9□□□□□ -0.82
MSH6-211ENST00000606499 A1BGP04217 495 aa9.9□□□□□ -0.82
MSH6-211ENST00000606499 CRKLP46109 303 aaKnown RBP9.9□□□□□ -0.82
MSH6-211ENST00000606499 TEX13AQ9BXU3 409 aaPredicted RBP9.9□□□□□ -0.82
MSH6-211ENST00000606499 CCDC87Q9NVE4 849 aa9.9□□□□□ -0.82
MSH6-211ENST00000606499 CHPF2Q9P2E5 772 aa9.9□□□□□ -0.82
MSH6-211ENST00000606499 CACNA1FO60840 1977 aa9.9□□□□□ -0.83
MSH6-211ENST00000606499 CNTNAP4Q9C0A0 1308 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 NBPF26B4DH59 902 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 ANXA1P04083 346 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 ZNF827Q17R98 1081 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 PROSER3Q2NL68 480 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 NBPF14Q5TI25 921 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 NBPF10Q6P3W6 841 aaKnown RBP9.89□□□□□ -0.83
MSH6-211ENST00000606499 INTS5Q6P9B9 1019 aaKnown RBP9.89□□□□□ -0.83
MSH6-211ENST00000606499 SMIM5Q71RC9 77 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 NBPF15Q8N660 670 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 BCL2L13Q9BXK5 485 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 ANO8Q9HCE9 1232 aaPredicted RBP9.89□□□□□ -0.83
MSH6-211ENST00000606499 ZBTB1Q9Y2K1 713 aa9.89□□□□□ -0.83
MSH6-211ENST00000606499 GNPATO15228 680 aa9.88□□□□□ -0.83
MSH6-211ENST00000606499 MYL6BP14649 208 aa9.88□□□□□ -0.83
MSH6-211ENST00000606499 CANXP27824 592 aaKnown RBP9.88□□□□□ -0.83
MSH6-211ENST00000606499 PDIA6Q15084 440 aa9.88□□□□□ -0.83
MSH6-211ENST00000606499 CCDC30Q5VVM6 783 aa9.88□□□□□ -0.83
MSH6-211ENST00000606499 AMIGO3Q86WK7 504 aa9.88□□□□□ -0.83
MSH6-211ENST00000606499 SSH1Q8WYL5 1049 aa9.88□□□□□ -0.83
MSH6-211ENST00000606499 AK7Q96M32 723 aa9.88□□□□□ -0.83
MSH6-211ENST00000606499 ANKRD36CQ5JPF3 1778 aa9.88□□□□□ -0.83
MSH6-211ENST00000606499 N4BP2Q86UW6 1770 aaPredicted RBP9.88□□□□□ -0.83
MSH6-211ENST00000606499 ERBB4Q15303 1308 aa9.87□□□□□ -0.83
MSH6-211ENST00000606499 CT47B1P0C2W7 299 aaPredicted RBP9.87□□□□□ -0.83
MSH6-211ENST00000606499 RARSP54136 660 aaKnown RBP9.87□□□□□ -0.83
MSH6-211ENST00000606499 STK31Q9BXU1 1019 aa9.87□□□□□ -0.83
MSH6-211ENST00000606499 DDX21Q9NR30 783 aaKnown RBP eCLIP9.87□□□□□ -0.83
MSH6-211ENST00000606499 SMC4Q9NTJ3 1288 aa9.87□□□□□ -0.83
MSH6-211ENST00000606499 DBF4Q9UBU7 674 aaPredicted RBP9.87□□□□□ -0.83
MSH6-211ENST00000606499 ZNF330Q9Y3S2 320 aaPredicted RBP9.87□□□□□ -0.83
MSH6-211ENST00000606499 CASZ1Q86V15 1759 aa9.87□□□□□ -0.83
MSH6-211ENST00000606499 COL15A1P39059 1388 aa9.87□□□□□ -0.83
MSH6-211ENST00000606499 BCAR3O75815 825 aa9.86□□□□□ -0.83
MSH6-211ENST00000606499 PHF14O94880 888 aa9.86□□□□□ -0.83
MSH6-211ENST00000606499 SLC4A2P04920 1241 aa9.86□□□□□ -0.83
MSH6-211ENST00000606499 RC3H1Q5TC82 1133 aaKnown RBP9.86□□□□□ -0.83
MSH6-211ENST00000606499 G2E3Q7L622 706 aa9.86□□□□□ -0.83
MSH6-211ENST00000606499 LRP10Q7Z4F1 713 aa9.86□□□□□ -0.83
MSH6-211ENST00000606499 AKT1S1Q96B36 256 aa9.86□□□□□ -0.83
MSH6-211ENST00000606499 PHAXQ9H814 394 aaKnown RBP9.86□□□□□ -0.83
MSH6-211ENST00000606499 RCAN3Q9UKA8 241 aa9.86□□□□□ -0.83
MSH6-211ENST00000606499 NUP98P52948 1817 aa9.86□□□□□ -0.83
MSH6-211ENST00000606499 AFDNP55196 1824 aaKnown RBP9.86□□□□□ -0.83
MSH6-211ENST00000606499 KCNA4P22459 653 aa9.85□□□□□ -0.83
MSH6-211ENST00000606499 IL6STP40189 918 aaPredicted RBP9.85□□□□□ -0.83
MSH6-211ENST00000606499 EIF5P55010 431 aaKnown RBP9.85□□□□□ -0.83
MSH6-211ENST00000606499 ALDH1L2Q3SY69 923 aa9.85□□□□□ -0.83
MSH6-211ENST00000606499 MRPL50Q8N5N7 158 aaKnown RBP9.85□□□□□ -0.83
MSH6-211ENST00000606499 ZNF428Q96B54 188 aa9.85□□□□□ -0.83
MSH6-211ENST00000606499 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP9.84□□□□□ -0.83
MSH6-211ENST00000606499 RPS6KA4O75676 772 aa9.84□□□□□ -0.83
MSH6-211ENST00000606499 AIMP1Q12904 312 aaKnown RBP9.84□□□□□ -0.83
MSH6-211ENST00000606499 SLC15A2Q16348 729 aa9.84□□□□□ -0.83
MSH6-211ENST00000606499 TTLL7Q6ZT98 887 aa9.84□□□□□ -0.83
MSH6-211ENST00000606499 XAGE3Q8WTP9 111 aa9.84□□□□□ -0.83
MSH6-211ENST00000606499 CHMP4AQ9BY43 222 aa9.84□□□□□ -0.83
MSH6-211ENST00000606499 HYPKQ9NX55 129 aa9.84□□□□□ -0.83
MSH6-211ENST00000606499 STK32BQ9NY57 414 aa9.84□□□□□ -0.83
MSH6-211ENST00000606499 TFCP2L1Q9NZI6 479 aa9.84□□□□□ -0.83
MSH6-211ENST00000606499 RTCBQ9Y3I0 505 aaKnown RBP9.84□□□□□ -0.83
MSH6-211ENST00000606499 PNPLA7Q6ZV29 1317 aa9.83□□□□□ -0.84
MSH6-211ENST00000606499 SSFA2P28290 1259 aa9.83□□□□□ -0.84
MSH6-211ENST00000606499 FLIIQ13045 1269 aa9.83□□□□□ -0.84
MSH6-211ENST00000606499 MAPK8IP2Q13387 824 aaPredicted RBP9.83□□□□□ -0.84
MSH6-211ENST00000606499 COPS6Q7L5N1 327 aa9.83□□□□□ -0.84
MSH6-211ENST00000606499 TBC1D2BQ9UPU7 963 aa9.83□□□□□ -0.84
MSH6-211ENST00000606499 ADCY9O60503 1353 aa9.83□□□□□ -0.84
MSH6-211ENST00000606499 KIF16BQ96L93 1317 aa9.82□□□□□ -0.84
MSH6-211ENST00000606499 COL24A1Q17RW2 1714 aa9.82□□□□□ -0.84
MSH6-211ENST00000606499 SOCS7O14512 581 aa9.82□□□□□ -0.84
MSH6-211ENST00000606499 FKBP5Q13451 457 aaPredicted RBP9.82□□□□□ -0.84
MSH6-211ENST00000606499 DZIP3Q86Y13 1208 aaKnown RBP9.82□□□□□ -0.84
MSH6-211ENST00000606499 FRAT1Q92837 279 aaPredicted RBP9.82□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 73.7 ms