RNA–Protein interactions for RNA: ENST00000603633.2

LINC00221-201, long intergenic non-protein coding RNA 221, humanhuman

TSL 2 BASIC

Gene LINC00221, Length 1,656 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00221-201ENST00000603633 SOS1Q07889 1333 aaPredicted RBP20.32■□□□□ 0.84
LINC00221-201ENST00000603633 PHF14O94880 888 aa20.32■□□□□ 0.84
LINC00221-201ENST00000603633 GOLGA2Q08379 1002 aa20.32■□□□□ 0.84
LINC00221-201ENST00000603633 ZBTB1Q9Y2K1 713 aa20.32■□□□□ 0.84
LINC00221-201ENST00000603633 PRAMEF22A3QJZ6 481 aa20.31■□□□□ 0.84
LINC00221-201ENST00000603633 MSH5O43196 834 aa20.31■□□□□ 0.84
LINC00221-201ENST00000603633 IL6STP40189 918 aaPredicted RBP20.31■□□□□ 0.84
LINC00221-201ENST00000603633 COL23A1Q86Y22 540 aaPredicted RBP20.31■□□□□ 0.84
LINC00221-201ENST00000603633 SIPA1L3O60292 1781 aaPredicted RBP20.31■□□□□ 0.84
LINC00221-201ENST00000603633 A0A087WZG4 1122 aa20.3■□□□□ 0.84
LINC00221-201ENST00000603633 E9PSI1 815 aa20.3■□□□□ 0.84
LINC00221-201ENST00000603633 RFC4P35249 363 aa20.3■□□□□ 0.84
LINC00221-201ENST00000603633 DLG5Q8TDM6 1919 aa20.3■□□□□ 0.84
LINC00221-201ENST00000603633 ERBB4Q15303 1308 aa20.3■□□□□ 0.84
LINC00221-201ENST00000603633 A1BGP04217 495 aa20.29■□□□□ 0.84
LINC00221-201ENST00000603633 CANXP27824 592 aaKnown RBP20.29■□□□□ 0.84
LINC00221-201ENST00000603633 HNRNPUQ00839 825 aaKnown RBP eCLIP20.29■□□□□ 0.84
LINC00221-201ENST00000603633 DUSP27Q5VZP5 1158 aa20.29■□□□□ 0.84
LINC00221-201ENST00000603633 ARHGEF1Q92888 912 aaKnown RBP20.29■□□□□ 0.84
LINC00221-201ENST00000603633 MTFR1LQ9H019 292 aa20.29■□□□□ 0.84
LINC00221-201ENST00000603633 C5P01031 1676 aa20.29■□□□□ 0.84
LINC00221-201ENST00000603633 C4BP0C0L5 1744 aa20.28■□□□□ 0.84
LINC00221-201ENST00000603633 EIF5P55010 431 aaKnown RBP20.28■□□□□ 0.84
LINC00221-201ENST00000603633 TSR2Q969E8 191 aaKnown RBP20.28■□□□□ 0.84
LINC00221-201ENST00000603633 CICQ96RK0 1608 aaPredicted RBP20.28■□□□□ 0.84
LINC00221-201ENST00000603633 EIF2S2P20042 333 aaKnown RBP20.27■□□□□ 0.84
LINC00221-201ENST00000603633 AMIGO3Q86WK7 504 aa20.27■□□□□ 0.84
LINC00221-201ENST00000603633 FANCIQ9NVI1 1328 aa20.27■□□□□ 0.84
LINC00221-201ENST00000603633 UBR2Q8IWV8 1755 aa20.26■□□□□ 0.83
LINC00221-201ENST00000603633 HDGFL1Q5TGJ6 251 aa20.26■□□□□ 0.83
LINC00221-201ENST00000603633 ZPR1O75312 459 aa20.26■□□□□ 0.83
LINC00221-201ENST00000603633 KRT24Q2M2I5 525 aa20.26■□□□□ 0.83
LINC00221-201ENST00000603633 PDGFDQ9GZP0 370 aaPredicted RBP20.26■□□□□ 0.83
LINC00221-201ENST00000603633 SPON1Q9HCB6 807 aa20.26■□□□□ 0.83
LINC00221-201ENST00000603633 C8orf58Q8NAV2 365 aa20.25■□□□□ 0.83
LINC00221-201ENST00000603633 SPINK5Q9NQ38 1064 aaPredicted RBP20.25■□□□□ 0.83
LINC00221-201ENST00000603633 COL15A1P39059 1388 aa20.24■□□□□ 0.83
LINC00221-201ENST00000603633 ZBTB7AO95365 584 aa20.24■□□□□ 0.83
LINC00221-201ENST00000603633 ZNF330Q9Y3S2 320 aaPredicted RBP20.24■□□□□ 0.83
LINC00221-201ENST00000603633 NBPF26B4DH59 902 aa20.23■□□□□ 0.83
LINC00221-201ENST00000603633 SLFN5Q08AF3 891 aa20.23■□□□□ 0.83
LINC00221-201ENST00000603633 NBPF10Q6P3W6 841 aaKnown RBP20.23■□□□□ 0.83
LINC00221-201ENST00000603633 SMIM5Q71RC9 77 aa20.23■□□□□ 0.83
LINC00221-201ENST00000603633 NLGN1Q8N2Q7 840 aa20.23■□□□□ 0.83
LINC00221-201ENST00000603633 NBPF15Q8N660 670 aa20.23■□□□□ 0.83
LINC00221-201ENST00000603633 NARFQ9UHQ1 456 aa20.23■□□□□ 0.83
LINC00221-201ENST00000603633 KDM3BQ7LBC6 1761 aa20.23■□□□□ 0.83
LINC00221-201ENST00000603633 ELL2O00472 640 aaPredicted RBP20.22■□□□□ 0.83
LINC00221-201ENST00000603633 TWISTNBQ3B726 338 aaPredicted RBP20.22■□□□□ 0.83
LINC00221-201ENST00000603633 CCDC30Q5VVM6 783 aa20.22■□□□□ 0.83
LINC00221-201ENST00000603633 DBF4Q9UBU7 674 aaPredicted RBP20.22■□□□□ 0.83
LINC00221-201ENST00000603633 USP42Q9H9J4 1324 aaKnown RBP20.22■□□□□ 0.83
LINC00221-201ENST00000603633 POLD1P28340 1107 aa20.22■□□□□ 0.83
LINC00221-201ENST00000603633 DDX21Q9NR30 783 aaKnown RBP eCLIP20.22■□□□□ 0.83
LINC00221-201ENST00000603633 TJP1Q07157 1748 aa20.22■□□□□ 0.83
LINC00221-201ENST00000603633 VIRMAQ69YN4 1812 aaKnown RBP20.2■□□□□ 0.82
LINC00221-201ENST00000603633 RGL2O15211 777 aa20.2■□□□□ 0.82
LINC00221-201ENST00000603633 MYL6BP14649 208 aa20.2■□□□□ 0.82
LINC00221-201ENST00000603633 PIP4K2AP48426 406 aaPredicted RBP20.2■□□□□ 0.82
LINC00221-201ENST00000603633 EXOSC9Q06265 439 aaKnown RBP20.2■□□□□ 0.82
LINC00221-201ENST00000603633 DZIP3Q86Y13 1208 aaKnown RBP20.2■□□□□ 0.82
LINC00221-201ENST00000603633 TSPYL6Q8N831 410 aa20.2■□□□□ 0.82
LINC00221-201ENST00000603633 ARXQ96QS3 562 aa20.2■□□□□ 0.82
LINC00221-201ENST00000603633 ATF5Q9Y2D1 282 aaPredicted RBP20.2■□□□□ 0.82
LINC00221-201ENST00000603633 GYS1P13807 737 aa20.19■□□□□ 0.82
LINC00221-201ENST00000603633 PDIA6Q15084 440 aa20.19■□□□□ 0.82
LINC00221-201ENST00000603633 NECTIN2Q92692 538 aa20.19■□□□□ 0.82
LINC00221-201ENST00000603633 HYPKQ9NX55 129 aa20.19■□□□□ 0.82
LINC00221-201ENST00000603633 ZBED9Q6R2W3 1325 aa20.19■□□□□ 0.82
LINC00221-201ENST00000603633 COL5A3P25940 1745 aaPredicted RBP20.19■□□□□ 0.82
LINC00221-201ENST00000603633 TRMT2AQ8IZ69 625 aaKnown RBP20.19■□□□□ 0.82
LINC00221-201ENST00000603633 TAF1LQ8IZX4 1826 aa20.18■□□□□ 0.82
LINC00221-201ENST00000603633 USPL1Q5W0Q7 1092 aa20.18■□□□□ 0.82
LINC00221-201ENST00000603633 KIF6Q6ZMV9 814 aa20.18■□□□□ 0.82
LINC00221-201ENST00000603633 STK31Q9BXU1 1019 aa20.18■□□□□ 0.82
LINC00221-201ENST00000603633 CHPF2Q9P2E5 772 aa20.18■□□□□ 0.82
LINC00221-201ENST00000603633 TBC1D2BQ9UPU7 963 aa20.18■□□□□ 0.82
LINC00221-201ENST00000603633 ZNF652Q9Y2D9 606 aa20.18■□□□□ 0.82
LINC00221-201ENST00000603633 VAMP4O75379 141 aa20.17■□□□□ 0.82
LINC00221-201ENST00000603633 CLEC4GQ6UXB4 293 aa20.17■□□□□ 0.82
LINC00221-201ENST00000603633 CDCA7LQ96GN5 454 aa20.17■□□□□ 0.82
LINC00221-201ENST00000603633 SRP68Q9UHB9 627 aaKnown RBP20.17■□□□□ 0.82
LINC00221-201ENST00000603633 ERVV-1B6SEH8 477 aa20.16■□□□□ 0.82
LINC00221-201ENST00000603633 MSL1Q68DK7 614 aa20.16■□□□□ 0.82
LINC00221-201ENST00000603633 CAMTA2O94983 1202 aa20.16■□□□□ 0.82
LINC00221-201ENST00000603633 CT47B1P0C2W7 299 aaPredicted RBP20.16■□□□□ 0.82
LINC00221-201ENST00000603633 PTGER2P43116 358 aa20.16■□□□□ 0.82
LINC00221-201ENST00000603633 LRP10Q7Z4F1 713 aa20.16■□□□□ 0.82
LINC00221-201ENST00000603633 ZNF428Q96B54 188 aa20.16■□□□□ 0.82
LINC00221-201ENST00000603633 PROSER3Q2NL68 480 aa20.15■□□□□ 0.82
LINC00221-201ENST00000603633 SGIP1Q9BQI5 828 aa20.15■□□□□ 0.82
LINC00221-201ENST00000603633 FKBP8Q14318 412 aa20.14■□□□□ 0.81
LINC00221-201ENST00000603633 COPS6Q7L5N1 327 aa20.14■□□□□ 0.81
LINC00221-201ENST00000603633 PPP1R1BQ9UD71 204 aaPredicted RBP20.14■□□□□ 0.81
LINC00221-201ENST00000603633 QSER1Q2KHR3 1735 aa20.14■□□□□ 0.81
LINC00221-201ENST00000603633 MAP3K15Q6ZN16 1313 aa20.14■□□□□ 0.81
LINC00221-201ENST00000603633 ANXA1P04083 346 aa20.13■□□□□ 0.81
LINC00221-201ENST00000603633 MMP10P09238 476 aa20.13■□□□□ 0.81
LINC00221-201ENST00000603633 XAGE3Q8WTP9 111 aa20.13■□□□□ 0.81
LINC00221-201ENST00000603633 CASZ1Q86V15 1759 aa20.12■□□□□ 0.81
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms