RNA–Protein interactions for RNA: ENST00000601357.6

SSBP4-209, Transcript of single stranded DNA binding protein 4, humanhuman

TSL 5

Gene SSBP4, Length 606 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP4-209ENST00000601357 STARD3NLO95772 234 aa30.19■■■□□ 2.42
SSBP4-209ENST00000601357 TM4SF1P30408 202 aa30.19■■■□□ 2.42
SSBP4-209ENST00000601357 USPL1Q5W0Q7 1092 aa30.19■■■□□ 2.42
SSBP4-209ENST00000601357 NARFQ9UHQ1 456 aa30.19■■■□□ 2.42
SSBP4-209ENST00000601357 BTBD11A6QL63 1104 aa30.18■■■□□ 2.42
SSBP4-209ENST00000601357 HTATSF1O43719 755 aaKnown RBP30.18■■■□□ 2.42
SSBP4-209ENST00000601357 ZPR1O75312 459 aa30.18■■■□□ 2.42
SSBP4-209ENST00000601357 FMNL2Q96PY5 1086 aa30.18■■■□□ 2.42
SSBP4-209ENST00000601357 TEX13AQ9BXU3 409 aaPredicted RBP30.18■■■□□ 2.42
SSBP4-209ENST00000601357 MCM10Q7L590 875 aa30.17■■■□□ 2.42
SSBP4-209ENST00000601357 RTF1Q92541 710 aaKnown RBP30.17■■■□□ 2.42
SSBP4-209ENST00000601357 DLG5Q8TDM6 1919 aa30.17■■■□□ 2.42
SSBP4-209ENST00000601357 KCNQ3O43525 872 aa30.16■■■□□ 2.42
SSBP4-209ENST00000601357 EIF5P55010 431 aaKnown RBP30.16■■■□□ 2.42
SSBP4-209ENST00000601357 WWC3Q9ULE0 1092 aa30.16■■■□□ 2.42
SSBP4-209ENST00000601357 POLRMTO00411 1230 aaKnown RBP30.15■■■□□ 2.42
SSBP4-209ENST00000601357 CANXP27824 592 aaKnown RBP30.15■■■□□ 2.42
SSBP4-209ENST00000601357 PLEKHF1Q96S99 279 aa30.15■■■□□ 2.42
SSBP4-209ENST00000601357 NRXN2Q9P2S2 1712 aa30.14■■■□□ 2.42
SSBP4-209ENST00000601357 A0A0G2JLW4 131 aa30.14■■■□□ 2.42
SSBP4-209ENST00000601357 BCL2L12Q9HB09 334 aa30.14■■■□□ 2.42
SSBP4-209ENST00000601357 DCTN1Q14203 1278 aa30.13■■■□□ 2.41
SSBP4-209ENST00000601357 RALBP1Q15311 655 aa30.13■■■□□ 2.41
SSBP4-209ENST00000601357 AFDNP55196 1824 aaKnown RBP30.12■■■□□ 2.41
SSBP4-209ENST00000601357 SCN7AQ01118 1682 aa30.12■■■□□ 2.41
SSBP4-209ENST00000601357 DPEP1P16444 411 aa30.12■■■□□ 2.41
SSBP4-209ENST00000601357 DDX10Q13206 875 aaKnown RBP30.12■■■□□ 2.41
SSBP4-209ENST00000601357 KCNA3P22001 575 aa30.1■■■□□ 2.41
SSBP4-209ENST00000601357 NFIXQ14938 502 aa30.1■■■□□ 2.41
SSBP4-209ENST00000601357 ADCY9O60503 1353 aa30.09■■■□□ 2.41
SSBP4-209ENST00000601357 A0A087WZG4 1122 aa30.08■■■□□ 2.41
SSBP4-209ENST00000601357 IL6STP40189 918 aaPredicted RBP30.08■■■□□ 2.41
SSBP4-209ENST00000601357 A1BGP04217 495 aa30.07■■■□□ 2.4
SSBP4-209ENST00000601357 ARFGEF1Q9Y6D6 1849 aa30.07■■■□□ 2.4
SSBP4-209ENST00000601357 NEFMP07197 916 aa30.06■■■□□ 2.4
SSBP4-209ENST00000601357 KDM3BQ7LBC6 1761 aa30.05■■■□□ 2.4
SSBP4-209ENST00000601357 TAF7Q15545 349 aaPredicted RBP30.05■■■□□ 2.4
SSBP4-209ENST00000601357 BCS1LQ9Y276 419 aa30.05■■■□□ 2.4
SSBP4-209ENST00000601357 USP16Q9Y5T5 823 aa30.05■■■□□ 2.4
SSBP4-209ENST00000601357 PRAMEF22A3QJZ6 481 aa30.04■■■□□ 2.4
SSBP4-209ENST00000601357 NFE2L2Q16236 605 aa30.04■■■□□ 2.4
SSBP4-209ENST00000601357 PNNQ9H307 717 aaKnown RBP30.04■■■□□ 2.4
SSBP4-209ENST00000601357 ATP10DQ9P241 1426 aa30.04■■■□□ 2.4
SSBP4-209ENST00000601357 BCORQ6W2J9 1755 aa30.03■■■□□ 2.4
SSBP4-209ENST00000601357 SNRPA1P09661 255 aaKnown RBP30.03■■■□□ 2.4
SSBP4-209ENST00000601357 MYBBP1AQ9BQG0 1328 aaKnown RBP30.02■■■□□ 2.4
SSBP4-209ENST00000601357 PIM2Q9P1W9 311 aa30.02■■■□□ 2.4
SSBP4-209ENST00000601357 DLEC1Q9Y238 1755 aa30.01■■■□□ 2.39
SSBP4-209ENST00000601357 SERPINB2P05120 415 aa30.01■■■□□ 2.39
SSBP4-209ENST00000601357 TBC1D2BQ9UPU7 963 aa30.01■■■□□ 2.39
SSBP4-209ENST00000601357 LAMB4A4D0S4 1761 aa30■■■□□ 2.39
SSBP4-209ENST00000601357 MAPK8IP3Q9UPT6 1336 aa29.99■■■□□ 2.39
SSBP4-209ENST00000601357 CHRNA5P30532 468 aa29.99■■■□□ 2.39
SSBP4-209ENST00000601357 ZNF330Q9Y3S2 320 aaPredicted RBP29.99■■■□□ 2.39
SSBP4-209ENST00000601357 TBC1D9BQ66K14 1250 aa29.98■■■□□ 2.39
SSBP4-209ENST00000601357 MIS18AQ9NYP9 233 aa29.98■■■□□ 2.39
SSBP4-209ENST00000601357 CAMTA2O94983 1202 aa29.97■■■□□ 2.39
SSBP4-209ENST00000601357 PNISRQ8TF01 805 aaKnown RBP29.97■■■□□ 2.39
SSBP4-209ENST00000601357 CARMIL3Q8ND23 1372 aa29.96■■■□□ 2.39
SSBP4-209ENST00000601357 DALRD3Q5D0E6 543 aaKnown RBP29.96■■■□□ 2.39
SSBP4-209ENST00000601357 PIP4K2AP48426 406 aaPredicted RBP29.95■■■□□ 2.39
SSBP4-209ENST00000601357 BICDL1Q6ZP65 573 aa29.95■■■□□ 2.39
SSBP4-209ENST00000601357 THUMPD2Q9BTF0 503 aaKnown RBP29.95■■■□□ 2.39
SSBP4-209ENST00000601357 ANKRD31Q8N7Z5 1873 aa29.95■■■□□ 2.38
SSBP4-209ENST00000601357 GIGYF1O75420 1035 aaPredicted RBP29.94■■■□□ 2.38
SSBP4-209ENST00000601357 C1QTNF8P60827 252 aa29.94■■■□□ 2.38
SSBP4-209ENST00000601357 DZIP3Q86Y13 1208 aaKnown RBP29.94■■■□□ 2.38
SSBP4-209ENST00000601357 NBPF26B4DH59 902 aa29.93■■■□□ 2.38
SSBP4-209ENST00000601357 NBPF10Q6P3W6 841 aaKnown RBP29.93■■■□□ 2.38
SSBP4-209ENST00000601357 ARHGAP27Q6ZUM4 889 aa29.93■■■□□ 2.38
SSBP4-209ENST00000601357 NPM2Q86SE8 214 aaKnown RBP29.93■■■□□ 2.38
SSBP4-209ENST00000601357 NBPF15Q8N660 670 aa29.93■■■□□ 2.38
SSBP4-209ENST00000601357 EIF4A1P60842 406 aaKnown RBP29.9■■■□□ 2.38
SSBP4-209ENST00000601357 GPBP1L1Q9HC44 474 aaPredicted RBP29.89■■■□□ 2.38
SSBP4-209ENST00000601357 PRR5LQ6MZQ0 368 aa29.88■■■□□ 2.37
SSBP4-209ENST00000601357 CLEC4GQ6UXB4 293 aa29.88■■■□□ 2.37
SSBP4-209ENST00000601357 PRKRIP1Q9H875 184 aaPredicted RBP29.88■■■□□ 2.37
SSBP4-209ENST00000601357 COL11A2P13942 1736 aaPredicted RBP29.88■■■□□ 2.37
SSBP4-209ENST00000601357 RGL2O15211 777 aa29.87■■■□□ 2.37
SSBP4-209ENST00000601357 TMPOP42166 694 aaKnown RBP29.87■■■□□ 2.37
SSBP4-209ENST00000601357 RIPK4P57078 832 aa29.87■■■□□ 2.37
SSBP4-209ENST00000601357 SETDB2Q96T68 719 aa29.87■■■□□ 2.37
SSBP4-209ENST00000601357 C2CD5Q86YS7 1000 aa29.86■■■□□ 2.37
SSBP4-209ENST00000601357 BRIP1Q9BX63 1249 aa29.86■■■□□ 2.37
SSBP4-209ENST00000601357 ZNF526Q8TF50 670 aaPredicted RBP29.85■■■□□ 2.37
SSBP4-209ENST00000601357 H0YIN7 160 aa29.84■■■□□ 2.37
SSBP4-209ENST00000601357 SBF1O95248 1867 aa29.84■■■□□ 2.37
SSBP4-209ENST00000601357 ZNF652Q9Y2D9 606 aa29.83■■■□□ 2.37
SSBP4-209ENST00000601357 TTLL6Q8N841 843 aa29.82■■■□□ 2.36
SSBP4-209ENST00000601357 CNBD1Q8NA66 436 aa29.82■■■□□ 2.36
SSBP4-209ENST00000601357 PDZRN3Q9UPQ7 1066 aa29.82■■■□□ 2.36
SSBP4-209ENST00000601357 PDE6BP35913 854 aa29.81■■■□□ 2.36
SSBP4-209ENST00000601357 LMOD3Q0VAK6 560 aa29.81■■■□□ 2.36
SSBP4-209ENST00000601357 CCDC146Q8IYE0 955 aa29.81■■■□□ 2.36
SSBP4-209ENST00000601357 BABAM1Q9NWV8 329 aa29.81■■■□□ 2.36
SSBP4-209ENST00000601357 WDR43Q15061 677 aaKnown RBP eCLIP29.8■■■□□ 2.36
SSBP4-209ENST00000601357 C9orf131Q5VYM1 1079 aa29.8■■■□□ 2.36
SSBP4-209ENST00000601357 CCDC24Q8N4L8 307 aa29.8■■■□□ 2.36
SSBP4-209ENST00000601357 TSPYL4Q9UJ04 414 aa29.8■■■□□ 2.36
SSBP4-209ENST00000601357 RUNDC1Q96C34 613 aa29.79■■■□□ 2.36
Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms