RNA–Protein interactions for RNA: ENST00000600648.1

FARP1-231, Transcript of FERM, ARH/RhoGEF and pleckstrin domain protein 1, human

TSL 5

Gene FARP1, Length 433 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FARP1-231	ENST00000600648	U2AF1	Q01081	240 aa	Known RBP eCLIP	28.89	■■■□□ 2.22
FARP1-231	ENST00000600648	VSIG10	Q8N0Z9	540 aa		28.89	■■■□□ 2.22
FARP1-231	ENST00000600648	ZNF496	Q96IT1	587 aa	Predicted RBP	28.88	■■■□□ 2.21
FARP1-231	ENST00000600648	COL15A1	P39059	1388 aa		28.88	■■■□□ 2.21
FARP1-231	ENST00000600648	SENP3-EIF4A1	A0A087X0R7	540 aa		28.87	■■■□□ 2.21
FARP1-231	ENST00000600648	FCHSD2	O94868	740 aa		28.87	■■■□□ 2.21
FARP1-231	ENST00000600648	TM4SF1	P30408	202 aa		28.86	■■■□□ 2.21
FARP1-231	ENST00000600648	ZNF790	Q6PG37	636 aa		28.86	■■■□□ 2.21
FARP1-231	ENST00000600648	ADCY9	O60503	1353 aa		28.86	■■■□□ 2.21
FARP1-231	ENST00000600648	POLRMT	O00411	1230 aa	Known RBP	28.85	■■■□□ 2.21
FARP1-231	ENST00000600648	STARD3NL	O95772	234 aa		28.85	■■■□□ 2.21
FARP1-231	ENST00000600648	GPBP1L1	Q9HC44	474 aa	Predicted RBP	28.85	■■■□□ 2.21
FARP1-231	ENST00000600648	NARF	Q9UHQ1	456 aa		28.85	■■■□□ 2.21
FARP1-231	ENST00000600648	UBR2	Q8IWV8	1755 aa		28.85	■■■□□ 2.21
FARP1-231	ENST00000600648	ARHGAP27	Q6ZUM4	889 aa		28.84	■■■□□ 2.21
FARP1-231	ENST00000600648	KCNA3	P22001	575 aa		28.83	■■■□□ 2.21
FARP1-231	ENST00000600648	KCNQ3	O43525	872 aa		28.82	■■■□□ 2.2
FARP1-231	ENST00000600648	CHRNA5	P30532	468 aa		28.82	■■■□□ 2.2
FARP1-231	ENST00000600648	NFIX	Q14938	502 aa		28.82	■■■□□ 2.2
FARP1-231	ENST00000600648	HEG1	Q9ULI3	1381 aa		28.82	■■■□□ 2.2
FARP1-231	ENST00000600648	CEMIP	Q8WUJ3	1361 aa		28.81	■■■□□ 2.2
FARP1-231	ENST00000600648	BCL2L12	Q9HB09	334 aa		28.81	■■■□□ 2.2
FARP1-231	ENST00000600648	ZNF330	Q9Y3S2	320 aa	Predicted RBP	28.81	■■■□□ 2.2
FARP1-231	ENST00000600648	BTBD11	A6QL63	1104 aa		28.8	■■■□□ 2.2
FARP1-231	ENST00000600648	PIM2	Q9P1W9	311 aa		28.8	■■■□□ 2.2
FARP1-231	ENST00000600648	MCM10	Q7L590	875 aa		28.79	■■■□□ 2.2
FARP1-231	ENST00000600648	FMNL2	Q96PY5	1086 aa		28.79	■■■□□ 2.2
FARP1-231	ENST00000600648	SIPA1L3	O60292	1781 aa	Predicted RBP	28.78	■■■□□ 2.2
FARP1-231	ENST00000600648	EIF5	P55010	431 aa	Known RBP	28.78	■■■□□ 2.2
FARP1-231	ENST00000600648	RTF1	Q92541	710 aa	Known RBP	28.78	■■■□□ 2.2
FARP1-231	ENST00000600648	DALRD3	Q5D0E6	543 aa	Known RBP	28.77	■■■□□ 2.2
FARP1-231	ENST00000600648	BICDL1	Q6ZP65	573 aa		28.77	■■■□□ 2.2
FARP1-231	ENST00000600648	TEX13A	Q9BXU3	409 aa	Predicted RBP	28.77	■■■□□ 2.2
FARP1-231	ENST00000600648	DCTN1	Q14203	1278 aa		28.76	■■■□□ 2.19
FARP1-231	ENST00000600648	BRCA1	P38398	1863 aa	Known RBP	28.75	■■■□□ 2.19
FARP1-231	ENST00000600648		A0A087WZG4	1122 aa		28.75	■■■□□ 2.19
FARP1-231	ENST00000600648	A1BG	P04217	495 aa		28.75	■■■□□ 2.19
FARP1-231	ENST00000600648	SERPINB2	P05120	415 aa		28.75	■■■□□ 2.19
FARP1-231	ENST00000600648	TBC1D2B	Q9UPU7	963 aa		28.74	■■■□□ 2.19
FARP1-231	ENST00000600648	PRAMEF22	A3QJZ6	481 aa		28.7	■■■□□ 2.18
FARP1-231	ENST00000600648	IL6ST	P40189	918 aa	Predicted RBP	28.7	■■■□□ 2.18
FARP1-231	ENST00000600648	PIP4K2A	P48426	406 aa	Predicted RBP	28.7	■■■□□ 2.18
FARP1-231	ENST00000600648	TBC1D9B	Q66K14	1250 aa		28.7	■■■□□ 2.18
FARP1-231	ENST00000600648	NPM2	Q86SE8	214 aa	Known RBP	28.7	■■■□□ 2.18
FARP1-231	ENST00000600648	AFDN	P55196	1824 aa	Known RBP	28.7	■■■□□ 2.18
FARP1-231	ENST00000600648	C9orf131	Q5VYM1	1079 aa		28.69	■■■□□ 2.18
FARP1-231	ENST00000600648	USP16	Q9Y5T5	823 aa		28.69	■■■□□ 2.18
FARP1-231	ENST00000600648	CARMIL3	Q8ND23	1372 aa		28.68	■■■□□ 2.18
FARP1-231	ENST00000600648	ARFGEF1	Q9Y6D6	1849 aa		28.66	■■■□□ 2.18
FARP1-231	ENST00000600648	C2CD5	Q86YS7	1000 aa		28.66	■■■□□ 2.18
FARP1-231	ENST00000600648	CCDC24	Q8N4L8	307 aa		28.66	■■■□□ 2.18
FARP1-231	ENST00000600648	HTATSF1	O43719	755 aa	Known RBP	28.65	■■■□□ 2.18
FARP1-231	ENST00000600648	NEFM	P07197	916 aa		28.65	■■■□□ 2.18
FARP1-231	ENST00000600648	MIS18A	Q9NYP9	233 aa		28.65	■■■□□ 2.18
FARP1-231	ENST00000600648	NRXN2	Q9P2S2	1712 aa		28.65	■■■□□ 2.18
FARP1-231	ENST00000600648	KIF3C	O14782	793 aa		28.64	■■■□□ 2.18
FARP1-231	ENST00000600648	SNRPA1	P09661	255 aa	Known RBP	28.64	■■■□□ 2.18
FARP1-231	ENST00000600648	CAMTA2	O94983	1202 aa		28.63	■■■□□ 2.17
FARP1-231	ENST00000600648	DZIP3	Q86Y13	1208 aa	Known RBP	28.63	■■■□□ 2.17
FARP1-231	ENST00000600648	SCN7A	Q01118	1682 aa		28.62	■■■□□ 2.17
FARP1-231	ENST00000600648	TAF7	Q15545	349 aa	Predicted RBP	28.62	■■■□□ 2.17
FARP1-231	ENST00000600648	RNF181	Q9P0P0	153 aa		28.62	■■■□□ 2.17
FARP1-231	ENST00000600648		H0YIN7	160 aa		28.61	■■■□□ 2.17
FARP1-231	ENST00000600648	PRR5L	Q6MZQ0	368 aa		28.6	■■■□□ 2.17
FARP1-231	ENST00000600648	TTLL6	Q8N841	843 aa		28.6	■■■□□ 2.17
FARP1-231	ENST00000600648	RASSF7	Q02833	373 aa		28.59	■■■□□ 2.17
FARP1-231	ENST00000600648	PLEKHF1	Q96S99	279 aa		28.59	■■■□□ 2.17
FARP1-231	ENST00000600648	SETDB2	Q96T68	719 aa		28.59	■■■□□ 2.17
FARP1-231	ENST00000600648	NMRK2	Q9NPI5	230 aa		28.59	■■■□□ 2.17
FARP1-231	ENST00000600648	CEP350	Q5VT06	3117 aa		28.58	■■■□□ 2.17
FARP1-231	ENST00000600648	NPHP1	O15259	732 aa		28.58	■■■□□ 2.17
FARP1-231	ENST00000600648	THUMPD2	Q9BTF0	503 aa	Known RBP	28.58	■■■□□ 2.17
FARP1-231	ENST00000600648	ZNF622	Q969S3	477 aa	Known RBP eCLIP	28.57	■■■□□ 2.16
FARP1-231	ENST00000600648	NBPF26	B4DH59	902 aa		28.56	■■■□□ 2.16
FARP1-231	ENST00000600648	NFE2L2	Q16236	605 aa		28.56	■■■□□ 2.16
FARP1-231	ENST00000600648	NBPF10	Q6P3W6	841 aa	Known RBP	28.56	■■■□□ 2.16
FARP1-231	ENST00000600648	NBPF15	Q8N660	670 aa		28.56	■■■□□ 2.16
FARP1-231	ENST00000600648	BRIP1	Q9BX63	1249 aa		28.56	■■■□□ 2.16
FARP1-231	ENST00000600648	MAPK8IP3	Q9UPT6	1336 aa		28.55	■■■□□ 2.16
FARP1-231	ENST00000600648	DDX10	Q13206	875 aa	Known RBP	28.55	■■■□□ 2.16
FARP1-231	ENST00000600648	CNBD1	Q8NA66	436 aa		28.55	■■■□□ 2.16
FARP1-231	ENST00000600648	HSPA6	P17066	643 aa		28.54	■■■□□ 2.16
FARP1-231	ENST00000600648	PDE6B	P35913	854 aa		28.54	■■■□□ 2.16
FARP1-231	ENST00000600648	ZNF219	Q9P2Y4	722 aa	Predicted RBP	28.54	■■■□□ 2.16
FARP1-231	ENST00000600648	DLEC1	Q9Y238	1755 aa		28.53	■■■□□ 2.16
FARP1-231	ENST00000600648	DLG5	Q8TDM6	1919 aa		28.53	■■■□□ 2.16
FARP1-231	ENST00000600648	ANKRD31	Q8N7Z5	1873 aa		28.53	■■■□□ 2.16
FARP1-231	ENST00000600648	ST5	P78524	1137 aa		28.51	■■■□□ 2.15
FARP1-231	ENST00000600648	RALBP1	Q15311	655 aa		28.51	■■■□□ 2.15
FARP1-231	ENST00000600648	PNISR	Q8TF01	805 aa	Known RBP	28.51	■■■□□ 2.15
FARP1-231	ENST00000600648	PNN	Q9H307	717 aa	Known RBP	28.51	■■■□□ 2.15
FARP1-231	ENST00000600648	BCOR	Q6W2J9	1755 aa		28.51	■■■□□ 2.15
FARP1-231	ENST00000600648	PRELP	P51888	382 aa		28.5	■■■□□ 2.15
FARP1-231	ENST00000600648	NGEF	Q8N5V2	710 aa		28.5	■■■□□ 2.15
FARP1-231	ENST00000600648	ZNF652	Q9Y2D9	606 aa		28.5	■■■□□ 2.15
FARP1-231	ENST00000600648	CLEC4G	Q6UXB4	293 aa		28.49	■■■□□ 2.15
FARP1-231	ENST00000600648	NBPF5P	Q86XG9	351 aa	Predicted RBP	28.49	■■■□□ 2.15
FARP1-231	ENST00000600648	SBF1	O95248	1867 aa		28.49	■■■□□ 2.15
FARP1-231	ENST00000600648	KDM2B	Q8NHM5	1336 aa		28.48	■■■□□ 2.15
FARP1-231	ENST00000600648	C21orf2	O43822	256 aa		28.48	■■■□□ 2.15

Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms