RNA–Protein interactions for RNA: ENST00000600408.1

KCNN4-206, Transcript of potassium calcium-activated channel subfamily N member 4, humanhuman

TSL 2

Gene KCNN4, Length 648 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNN4-206ENST00000600408 SENP3-EIF4A1A0A087X0R7 540 aa22.67■■□□□ 1.22
KCNN4-206ENST00000600408 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP22.67■■□□□ 1.22
KCNN4-206ENST00000600408 PHF14O94880 888 aa22.67■■□□□ 1.22
KCNN4-206ENST00000600408 GIGYF1O75420 1035 aaPredicted RBP22.66■■□□□ 1.22
KCNN4-206ENST00000600408 ZNF853P0CG23 659 aa22.66■■□□□ 1.22
KCNN4-206ENST00000600408 TRAPPC3LQ5T215 181 aa22.66■■□□□ 1.22
KCNN4-206ENST00000600408 NPM2Q86SE8 214 aaKnown RBP22.66■■□□□ 1.22
KCNN4-206ENST00000600408 UBR3Q6ZT12 1888 aa22.66■■□□□ 1.22
KCNN4-206ENST00000600408 CASZ1Q86V15 1759 aa22.66■■□□□ 1.22
KCNN4-206ENST00000600408 INTS5Q6P9B9 1019 aaKnown RBP22.65■■□□□ 1.22
KCNN4-206ENST00000600408 MBIPQ9NS73 344 aa22.65■■□□□ 1.22
KCNN4-206ENST00000600408 TUBGCP6Q96RT7 1819 aa22.65■■□□□ 1.22
KCNN4-206ENST00000600408 COL23A1Q86Y22 540 aaPredicted RBP22.64■■□□□ 1.21
KCNN4-206ENST00000600408 MTFR1LQ9H019 292 aa22.63■■□□□ 1.21
KCNN4-206ENST00000600408 LAMB4A4D0S4 1761 aa22.63■■□□□ 1.21
KCNN4-206ENST00000600408 HOXB7P09629 217 aa22.62■■□□□ 1.21
KCNN4-206ENST00000600408 RFC4P35249 363 aa22.62■■□□□ 1.21
KCNN4-206ENST00000600408 CHMP4AQ9BY43 222 aa22.62■■□□□ 1.21
KCNN4-206ENST00000600408 SPON1Q9HCB6 807 aa22.62■■□□□ 1.21
KCNN4-206ENST00000600408 ZBTB1Q9Y2K1 713 aa22.62■■□□□ 1.21
KCNN4-206ENST00000600408 USP16Q9Y5T5 823 aa22.62■■□□□ 1.21
KCNN4-206ENST00000600408 SOS1Q07889 1333 aaPredicted RBP22.61■■□□□ 1.21
KCNN4-206ENST00000600408 A0A087WZG4 1122 aa22.61■■□□□ 1.21
KCNN4-206ENST00000600408 CANXP27824 592 aaKnown RBP22.61■■□□□ 1.21
KCNN4-206ENST00000600408 MYH16Q9H6N6 1097 aa22.61■■□□□ 1.21
KCNN4-206ENST00000600408 MYH14Q7Z406 1995 aaKnown RBP22.6■■□□□ 1.21
KCNN4-206ENST00000600408 PRAMEF22A3QJZ6 481 aa22.6■■□□□ 1.21
KCNN4-206ENST00000600408 ZBTB7AO95365 584 aa22.6■■□□□ 1.21
KCNN4-206ENST00000600408 IL6STP40189 918 aaPredicted RBP22.6■■□□□ 1.21
KCNN4-206ENST00000600408 PDGFDQ9GZP0 370 aaPredicted RBP22.6■■□□□ 1.21
KCNN4-206ENST00000600408 COL15A1P39059 1388 aa22.6■■□□□ 1.21
KCNN4-206ENST00000600408 ERBB4Q15303 1308 aa22.59■■□□□ 1.21
KCNN4-206ENST00000600408 AMIGO3Q86WK7 504 aa22.59■■□□□ 1.21
KCNN4-206ENST00000600408 ARHGEF1Q92888 912 aaKnown RBP22.59■■□□□ 1.21
KCNN4-206ENST00000600408 A1BGP04217 495 aa22.58■■□□□ 1.21
KCNN4-206ENST00000600408 ZNF521Q96K83 1311 aa22.57■■□□□ 1.2
KCNN4-206ENST00000600408 ZPR1O75312 459 aa22.57■■□□□ 1.2
KCNN4-206ENST00000600408 EIF5P55010 431 aaKnown RBP22.57■■□□□ 1.2
KCNN4-206ENST00000600408 GOLGA2Q08379 1002 aa22.57■■□□□ 1.2
KCNN4-206ENST00000600408 ZNF330Q9Y3S2 320 aaPredicted RBP22.57■■□□□ 1.2
KCNN4-206ENST00000600408 EIF2S2P20042 333 aaKnown RBP22.56■■□□□ 1.2
KCNN4-206ENST00000600408 POLD1P28340 1107 aa22.56■■□□□ 1.2
KCNN4-206ENST00000600408 DUSP27Q5VZP5 1158 aa22.56■■□□□ 1.2
KCNN4-206ENST00000600408 TSR2Q969E8 191 aaKnown RBP22.56■■□□□ 1.2
KCNN4-206ENST00000600408 SMIM5Q71RC9 77 aa22.55■■□□□ 1.2
KCNN4-206ENST00000600408 ATF5Q9Y2D1 282 aaPredicted RBP22.55■■□□□ 1.2
KCNN4-206ENST00000600408 LRP5O75197 1615 aa22.55■■□□□ 1.2
KCNN4-206ENST00000600408 USP42Q9H9J4 1324 aaKnown RBP22.55■■□□□ 1.2
KCNN4-206ENST00000600408 FANCIQ9NVI1 1328 aa22.55■■□□□ 1.2
KCNN4-206ENST00000600408 E9PSI1 815 aa22.54■■□□□ 1.2
KCNN4-206ENST00000600408 HDGFL1Q5TGJ6 251 aa22.54■■□□□ 1.2
KCNN4-206ENST00000600408 NLGN1Q8N2Q7 840 aa22.54■■□□□ 1.2
KCNN4-206ENST00000600408 KRT24Q2M2I5 525 aa22.53■■□□□ 1.2
KCNN4-206ENST00000600408 NARFQ9UHQ1 456 aa22.53■■□□□ 1.2
KCNN4-206ENST00000600408 C4AP0C0L4 1744 aa22.53■■□□□ 1.2
KCNN4-206ENST00000600408 HNRNPUQ00839 825 aaKnown RBP eCLIP22.52■■□□□ 1.2
KCNN4-206ENST00000600408 ARXQ96QS3 562 aa22.52■■□□□ 1.2
KCNN4-206ENST00000600408 NBPF26B4DH59 902 aa22.51■■□□□ 1.19
KCNN4-206ENST00000600408 NBPF10Q6P3W6 841 aaKnown RBP22.51■■□□□ 1.19
KCNN4-206ENST00000600408 NBPF15Q8N660 670 aa22.51■■□□□ 1.19
KCNN4-206ENST00000600408 PPP1R1BQ9UD71 204 aaPredicted RBP22.51■■□□□ 1.19
KCNN4-206ENST00000600408 PIP4K2AP48426 406 aaPredicted RBP22.5■■□□□ 1.19
KCNN4-206ENST00000600408 MSL1Q68DK7 614 aa22.5■■□□□ 1.19
KCNN4-206ENST00000600408 DZIP3Q86Y13 1208 aaKnown RBP22.5■■□□□ 1.19
KCNN4-206ENST00000600408 C8orf58Q8NAV2 365 aa22.5■■□□□ 1.19
KCNN4-206ENST00000600408 DBF4Q9UBU7 674 aaPredicted RBP22.5■■□□□ 1.19
KCNN4-206ENST00000600408 ELL2O00472 640 aaPredicted RBP22.49■■□□□ 1.19
KCNN4-206ENST00000600408 GYS1P13807 737 aa22.49■■□□□ 1.19
KCNN4-206ENST00000600408 MYL6BP14649 208 aa22.49■■□□□ 1.19
KCNN4-206ENST00000600408 TWISTNBQ3B726 338 aaPredicted RBP22.49■■□□□ 1.19
KCNN4-206ENST00000600408 CCDC30Q5VVM6 783 aa22.49■■□□□ 1.19
KCNN4-206ENST00000600408 USPL1Q5W0Q7 1092 aa22.49■■□□□ 1.19
KCNN4-206ENST00000600408 NECTIN2Q92692 538 aa22.49■■□□□ 1.19
KCNN4-206ENST00000600408 DDX21Q9NR30 783 aaKnown RBP eCLIP22.49■■□□□ 1.19
KCNN4-206ENST00000600408 RGL2O15211 777 aa22.48■■□□□ 1.19
KCNN4-206ENST00000600408 PTGER2P43116 358 aa22.48■■□□□ 1.19
KCNN4-206ENST00000600408 KIF6Q6ZMV9 814 aa22.48■■□□□ 1.19
KCNN4-206ENST00000600408 SRP68Q9UHB9 627 aaKnown RBP22.48■■□□□ 1.19
KCNN4-206ENST00000600408 TBC1D2BQ9UPU7 963 aa22.48■■□□□ 1.19
KCNN4-206ENST00000600408 ZNF652Q9Y2D9 606 aa22.48■■□□□ 1.19
KCNN4-206ENST00000600408 SPINK5Q9NQ38 1064 aaPredicted RBP22.47■■□□□ 1.19
KCNN4-206ENST00000600408 COL24A1Q17RW2 1714 aa22.47■■□□□ 1.19
KCNN4-206ENST00000600408 EXOSC9Q06265 439 aaKnown RBP22.46■■□□□ 1.19
KCNN4-206ENST00000600408 SLFN5Q08AF3 891 aa22.46■■□□□ 1.19
KCNN4-206ENST00000600408 SGIP1Q9BQI5 828 aa22.46■■□□□ 1.19
KCNN4-206ENST00000600408 STK31Q9BXU1 1019 aa22.46■■□□□ 1.19
KCNN4-206ENST00000600408 HYPKQ9NX55 129 aa22.46■■□□□ 1.19
KCNN4-206ENST00000600408 CHPF2Q9P2E5 772 aa22.46■■□□□ 1.19
KCNN4-206ENST00000600408 TSPYL6Q8N831 410 aa22.45■■□□□ 1.18
KCNN4-206ENST00000600408 SCN7AQ01118 1682 aa22.45■■□□□ 1.18
KCNN4-206ENST00000600408 CAMTA2O94983 1202 aa22.44■■□□□ 1.18
KCNN4-206ENST00000600408 MMP10P09238 476 aa22.44■■□□□ 1.18
KCNN4-206ENST00000600408 FKBP8Q14318 412 aa22.44■■□□□ 1.18
KCNN4-206ENST00000600408 PDIA6Q15084 440 aa22.44■■□□□ 1.18
KCNN4-206ENST00000600408 CLEC4GQ6UXB4 293 aa22.44■■□□□ 1.18
KCNN4-206ENST00000600408 ERVV-1B6SEH8 477 aa22.43■■□□□ 1.18
KCNN4-206ENST00000600408 PARP3Q9Y6F1 533 aa22.43■■□□□ 1.18
KCNN4-206ENST00000600408 ZBED9Q6R2W3 1325 aa22.42■■□□□ 1.18
KCNN4-206ENST00000600408 MAP3K15Q6ZN16 1313 aa22.42■■□□□ 1.18
KCNN4-206ENST00000600408 BCORQ6W2J9 1755 aa22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms