RNA–Protein interactions for RNA: ENST00000598808.5

IRF3-221, Transcript of interferon regulatory factor 3, humanhuman

TSL 5 BASIC

Gene IRF3, Length 1,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF3-221ENST00000598808 MBIPQ9NS73 344 aa26.13■■□□□ 1.77
IRF3-221ENST00000598808 ZNF330Q9Y3S2 320 aaPredicted RBP26.13■■□□□ 1.77
IRF3-221ENST00000598808 UBR3Q6ZT12 1888 aa26.13■■□□□ 1.77
IRF3-221ENST00000598808 QSER1Q2KHR3 1735 aa26.13■■□□□ 1.77
IRF3-221ENST00000598808 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP26.12■■□□□ 1.77
IRF3-221ENST00000598808 CANXP27824 592 aaKnown RBP26.12■■□□□ 1.77
IRF3-221ENST00000598808 RC3H1Q5TC82 1133 aaKnown RBP26.12■■□□□ 1.77
IRF3-221ENST00000598808 NGEFQ8N5V2 710 aa26.11■■□□□ 1.77
IRF3-221ENST00000598808 ZBTB7AO95365 584 aa26.11■■□□□ 1.77
IRF3-221ENST00000598808 NCBP3Q53F19 620 aaKnown RBP26.11■■□□□ 1.77
IRF3-221ENST00000598808 AMIGO3Q86WK7 504 aa26.11■■□□□ 1.77
IRF3-221ENST00000598808 FLAD1Q8NFF5 587 aa26.11■■□□□ 1.77
IRF3-221ENST00000598808 ZBTB1Q9Y2K1 713 aa26.11■■□□□ 1.77
IRF3-221ENST00000598808 MYH14Q7Z406 1995 aaKnown RBP26.1■■□□□ 1.77
IRF3-221ENST00000598808 LAMB4A4D0S4 1761 aa26.1■■□□□ 1.77
IRF3-221ENST00000598808 SSFA2P28290 1259 aa26.1■■□□□ 1.77
IRF3-221ENST00000598808 COL23A1Q86Y22 540 aaPredicted RBP26.1■■□□□ 1.77
IRF3-221ENST00000598808 USP16Q9Y5T5 823 aa26.1■■□□□ 1.77
IRF3-221ENST00000598808 INTS5Q6P9B9 1019 aaKnown RBP26.09■■□□□ 1.77
IRF3-221ENST00000598808 NPM2Q86SE8 214 aaKnown RBP26.09■■□□□ 1.77
IRF3-221ENST00000598808 TSR2Q969E8 191 aaKnown RBP26.09■■□□□ 1.77
IRF3-221ENST00000598808 GIGYF1O75420 1035 aaPredicted RBP26.08■■□□□ 1.77
IRF3-221ENST00000598808 RPS6KA4O75676 772 aa26.08■■□□□ 1.77
IRF3-221ENST00000598808 PIP4K2AP48426 406 aaPredicted RBP26.08■■□□□ 1.77
IRF3-221ENST00000598808 KRT24Q2M2I5 525 aa26.08■■□□□ 1.77
IRF3-221ENST00000598808 TRAPPC3LQ5T215 181 aa26.08■■□□□ 1.77
IRF3-221ENST00000598808 A1BGP04217 495 aa26.07■■□□□ 1.76
IRF3-221ENST00000598808 ZNF853P0CG23 659 aa26.07■■□□□ 1.76
IRF3-221ENST00000598808 WDR63Q8IWG1 891 aa26.07■■□□□ 1.76
IRF3-221ENST00000598808 ARXQ96QS3 562 aa26.07■■□□□ 1.76
IRF3-221ENST00000598808 EIF2S2P20042 333 aaKnown RBP26.06■■□□□ 1.76
IRF3-221ENST00000598808 SPON1Q9HCB6 807 aa26.06■■□□□ 1.76
IRF3-221ENST00000598808 IL16Q14005 1332 aa26.06■■□□□ 1.76
IRF3-221ENST00000598808 RFC4P35249 363 aa26.05■■□□□ 1.76
IRF3-221ENST00000598808 NECTIN2Q92692 538 aa26.05■■□□□ 1.76
IRF3-221ENST00000598808 ATF5Q9Y2D1 282 aaPredicted RBP26.05■■□□□ 1.76
IRF3-221ENST00000598808 HNRNPUQ00839 825 aaKnown RBP eCLIP26.04■■□□□ 1.762e-8■□□□□ 8.3
IRF3-221ENST00000598808 MSL1Q68DK7 614 aa26.04■■□□□ 1.76
IRF3-221ENST00000598808 COL15A1P39059 1388 aa26.04■■□□□ 1.76
IRF3-221ENST00000598808 ADRA2BP18089 450 aa26.04■■□□□ 1.76
IRF3-221ENST00000598808 SOS1Q07889 1333 aaPredicted RBP26.04■■□□□ 1.76
IRF3-221ENST00000598808 ELL2O00472 640 aaPredicted RBP26.03■■□□□ 1.76
IRF3-221ENST00000598808 ARHGEF1Q92888 912 aaKnown RBP26.03■■□□□ 1.76
IRF3-221ENST00000598808 MTFR1LQ9H019 292 aa26.02■■□□□ 1.76
IRF3-221ENST00000598808 MYH16Q9H6N6 1097 aa26.02■■□□□ 1.76
IRF3-221ENST00000598808 FANCIQ9NVI1 1328 aa26.02■■□□□ 1.76
IRF3-221ENST00000598808 C4AP0C0L4 1744 aa26.02■■□□□ 1.76
IRF3-221ENST00000598808 DUSP27Q5VZP5 1158 aa26.01■■□□□ 1.75
IRF3-221ENST00000598808 MYL6BP14649 208 aa26■■□□□ 1.75
IRF3-221ENST00000598808 SLC16A10Q8TF71 515 aa26■■□□□ 1.75
IRF3-221ENST00000598808 PTGER2P43116 358 aa25.99■■□□□ 1.75
IRF3-221ENST00000598808 GOLGA2Q08379 1002 aa25.99■■□□□ 1.75
IRF3-221ENST00000598808 HDGFL1Q5TGJ6 251 aa25.99■■□□□ 1.75
IRF3-221ENST00000598808 ZPR1O75312 459 aa25.98■■□□□ 1.75
IRF3-221ENST00000598808 IL6STP40189 918 aaPredicted RBP25.98■■□□□ 1.75
IRF3-221ENST00000598808 SRP68Q9UHB9 627 aaKnown RBP25.98■■□□□ 1.75
IRF3-221ENST00000598808 ZNF521Q96K83 1311 aa25.98■■□□□ 1.75
IRF3-221ENST00000598808 A0A087WZG4 1122 aa25.98■■□□□ 1.75
IRF3-221ENST00000598808 SPINK5Q9NQ38 1064 aaPredicted RBP25.98■■□□□ 1.75
IRF3-221ENST00000598808 C8orf58Q8NAV2 365 aa25.97■■□□□ 1.75
IRF3-221ENST00000598808 COL24A1Q17RW2 1714 aa25.96■■□□□ 1.75
IRF3-221ENST00000598808 NBPF26B4DH59 902 aa25.96■■□□□ 1.75
IRF3-221ENST00000598808 POLD1P28340 1107 aa25.96■■□□□ 1.75
IRF3-221ENST00000598808 EIF5P55010 431 aaKnown RBP25.96■■□□□ 1.75
IRF3-221ENST00000598808 NBPF10Q6P3W6 841 aaKnown RBP25.96■■□□□ 1.75
IRF3-221ENST00000598808 NBPF15Q8N660 670 aa25.96■■□□□ 1.75
IRF3-221ENST00000598808 SGIP1Q9BQI5 828 aa25.96■■□□□ 1.75
IRF3-221ENST00000598808 PPP1R1BQ9UD71 204 aaPredicted RBP25.96■■□□□ 1.75
IRF3-221ENST00000598808 TBC1D2BQ9UPU7 963 aa25.96■■□□□ 1.75
IRF3-221ENST00000598808 HOXB7P09629 217 aa25.95■■□□□ 1.74
IRF3-221ENST00000598808 USP42Q9H9J4 1324 aaKnown RBP25.94■■□□□ 1.74
IRF3-221ENST00000598808 USPL1Q5W0Q7 1092 aa25.94■■□□□ 1.74
IRF3-221ENST00000598808 E9PSI1 815 aa25.93■■□□□ 1.74
IRF3-221ENST00000598808 ANXA1P04083 346 aa25.93■■□□□ 1.74
IRF3-221ENST00000598808 TWISTNBQ3B726 338 aaPredicted RBP25.93■■□□□ 1.74
IRF3-221ENST00000598808 DZIP3Q86Y13 1208 aaKnown RBP25.93■■□□□ 1.74
IRF3-221ENST00000598808 TSPYL6Q8N831 410 aa25.93■■□□□ 1.74
IRF3-221ENST00000598808 ERBB4Q15303 1308 aa25.93■■□□□ 1.74
IRF3-221ENST00000598808 EXOSC9Q06265 439 aaKnown RBP25.92■■□□□ 1.74
IRF3-221ENST00000598808 CHPF2Q9P2E5 772 aa25.92■■□□□ 1.74
IRF3-221ENST00000598808 NARFQ9UHQ1 456 aa25.91■■□□□ 1.74
IRF3-221ENST00000598808 GYS1P13807 737 aa25.91■■□□□ 1.74
IRF3-221ENST00000598808 PROSER3Q2NL68 480 aa25.91■■□□□ 1.74
IRF3-221ENST00000598808 KIF6Q6ZMV9 814 aa25.91■■□□□ 1.74
IRF3-221ENST00000598808 KLHL34Q8N239 644 aa25.91■■□□□ 1.74
IRF3-221ENST00000598808 CDCA7LQ96GN5 454 aa25.91■■□□□ 1.74
IRF3-221ENST00000598808 SCN7AQ01118 1682 aa25.89■■□□□ 1.74
IRF3-221ENST00000598808 TCERG1O14776 1098 aaKnown RBP25.88■■□□□ 1.73
IRF3-221ENST00000598808 AIMP1Q12904 312 aaKnown RBP25.88■■□□□ 1.73
IRF3-221ENST00000598808 FKBP8Q14318 412 aa25.88■■□□□ 1.73
IRF3-221ENST00000598808 NLGN1Q8N2Q7 840 aa25.88■■□□□ 1.73
IRF3-221ENST00000598808 DBF4Q9UBU7 674 aaPredicted RBP25.88■■□□□ 1.73
IRF3-221ENST00000598808 SLFN5Q08AF3 891 aa25.87■■□□□ 1.73
IRF3-221ENST00000598808 CCDC30Q5VVM6 783 aa25.87■■□□□ 1.73
IRF3-221ENST00000598808 BICDL1Q6ZP65 573 aa25.87■■□□□ 1.73
IRF3-221ENST00000598808 CHMP4AQ9BY43 222 aa25.87■■□□□ 1.73
IRF3-221ENST00000598808 DDX21Q9NR30 783 aaKnown RBP eCLIP25.87■■□□□ 1.73
IRF3-221ENST00000598808 MMP10P09238 476 aa25.86■■□□□ 1.73
IRF3-221ENST00000598808 STK31Q9BXU1 1019 aa25.86■■□□□ 1.73
IRF3-221ENST00000598808 BCORQ6W2J9 1755 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms