RNA–Protein interactions for RNA: ENST00000598607.1

GTF2F1-206, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 4

Gene GTF2F1, Length 568 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-206ENST00000598607 MBIPQ9NS73 344 aa19.62■□□□□ 0.73
GTF2F1-206ENST00000598607 CCDC87Q9NVE4 849 aa19.62■□□□□ 0.73
GTF2F1-206ENST00000598607 GIGYF1O75420 1035 aaPredicted RBP19.61■□□□□ 0.73
GTF2F1-206ENST00000598607 RTCBQ9Y3I0 505 aaKnown RBP19.61■□□□□ 0.73
GTF2F1-206ENST00000598607 ZNF521Q96K83 1311 aa19.6■□□□□ 0.73
GTF2F1-206ENST00000598607 RPS6KA4O75676 772 aa19.6■□□□□ 0.73
GTF2F1-206ENST00000598607 SSFA2P28290 1259 aa19.6■□□□□ 0.73
GTF2F1-206ENST00000598607 CACNA1FO60840 1977 aa19.6■□□□□ 0.73
GTF2F1-206ENST00000598607 PNPLA7Q6ZV29 1317 aa19.59■□□□□ 0.73
GTF2F1-206ENST00000598607 USP16Q9Y5T5 823 aa19.59■□□□□ 0.73
GTF2F1-206ENST00000598607 ADRA2BP18089 450 aa19.58■□□□□ 0.72
GTF2F1-206ENST00000598607 INTS5Q6P9B9 1019 aaKnown RBP19.58■□□□□ 0.72
GTF2F1-206ENST00000598607 PRAMEF22A3QJZ6 481 aa19.57■□□□□ 0.72
GTF2F1-206ENST00000598607 HOXB7P09629 217 aa19.57■□□□□ 0.72
GTF2F1-206ENST00000598607 HNRNPUQ00839 825 aaKnown RBP eCLIP19.57■□□□□ 0.72
GTF2F1-206ENST00000598607 GOLGA2Q08379 1002 aa19.57■□□□□ 0.72
GTF2F1-206ENST00000598607 MYH16Q9H6N6 1097 aa19.57■□□□□ 0.72
GTF2F1-206ENST00000598607 ZBTB1Q9Y2K1 713 aa19.57■□□□□ 0.72
GTF2F1-206ENST00000598607 COL24A1Q17RW2 1714 aa19.56■□□□□ 0.72
GTF2F1-206ENST00000598607 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP19.56■□□□□ 0.72
GTF2F1-206ENST00000598607 PHF14O94880 888 aa19.56■□□□□ 0.72
GTF2F1-206ENST00000598607 TRAPPC3LQ5T215 181 aa19.56■□□□□ 0.72
GTF2F1-206ENST00000598607 SLC16A10Q8TF71 515 aa19.56■□□□□ 0.72
GTF2F1-206ENST00000598607 SOS1Q07889 1333 aaPredicted RBP19.55■□□□□ 0.72
GTF2F1-206ENST00000598607 MSH5O43196 834 aa19.55■□□□□ 0.72
GTF2F1-206ENST00000598607 CANXP27824 592 aaKnown RBP19.55■□□□□ 0.72
GTF2F1-206ENST00000598607 NPM2Q86SE8 214 aaKnown RBP19.55■□□□□ 0.72
GTF2F1-206ENST00000598607 TSR2Q969E8 191 aaKnown RBP19.55■□□□□ 0.72
GTF2F1-206ENST00000598607 CHMP4AQ9BY43 222 aa19.55■□□□□ 0.72
GTF2F1-206ENST00000598607 ERBB4Q15303 1308 aa19.54■□□□□ 0.72
GTF2F1-206ENST00000598607 FANCIQ9NVI1 1328 aa19.54■□□□□ 0.72
GTF2F1-206ENST00000598607 A1BGP04217 495 aa19.54■□□□□ 0.72
GTF2F1-206ENST00000598607 IL6STP40189 918 aaPredicted RBP19.54■□□□□ 0.72
GTF2F1-206ENST00000598607 COL23A1Q86Y22 540 aaPredicted RBP19.54■□□□□ 0.72
GTF2F1-206ENST00000598607 COL15A1P39059 1388 aa19.54■□□□□ 0.72
GTF2F1-206ENST00000598607 BCORQ6W2J9 1755 aa19.53■□□□□ 0.72
GTF2F1-206ENST00000598607 E9PSI1 815 aa19.53■□□□□ 0.72
GTF2F1-206ENST00000598607 KRT24Q2M2I5 525 aa19.53■□□□□ 0.72
GTF2F1-206ENST00000598607 DUSP27Q5VZP5 1158 aa19.53■□□□□ 0.72
GTF2F1-206ENST00000598607 A0A087WZG4 1122 aa19.52■□□□□ 0.72
GTF2F1-206ENST00000598607 EIF2S2P20042 333 aaKnown RBP19.52■□□□□ 0.72
GTF2F1-206ENST00000598607 RFC4P35249 363 aa19.52■□□□□ 0.72
GTF2F1-206ENST00000598607 EIF5P55010 431 aaKnown RBP19.52■□□□□ 0.72
GTF2F1-206ENST00000598607 AMIGO3Q86WK7 504 aa19.52■□□□□ 0.72
GTF2F1-206ENST00000598607 ARHGEF1Q92888 912 aaKnown RBP19.52■□□□□ 0.72
GTF2F1-206ENST00000598607 SCN7AQ01118 1682 aa19.52■□□□□ 0.71
GTF2F1-206ENST00000598607 SPINK5Q9NQ38 1064 aaPredicted RBP19.51■□□□□ 0.71
GTF2F1-206ENST00000598607 HDGFL1Q5TGJ6 251 aa19.5■□□□□ 0.71
GTF2F1-206ENST00000598607 C8orf58Q8NAV2 365 aa19.5■□□□□ 0.71
GTF2F1-206ENST00000598607 PDGFDQ9GZP0 370 aaPredicted RBP19.5■□□□□ 0.71
GTF2F1-206ENST00000598607 MTFR1LQ9H019 292 aa19.5■□□□□ 0.71
GTF2F1-206ENST00000598607 ZNF330Q9Y3S2 320 aaPredicted RBP19.5■□□□□ 0.71
GTF2F1-206ENST00000598607 NUP98P52948 1817 aa19.5■□□□□ 0.71
GTF2F1-206ENST00000598607 LRP5O75197 1615 aa19.5■□□□□ 0.71
GTF2F1-206ENST00000598607 ELL2O00472 640 aaPredicted RBP19.49■□□□□ 0.71
GTF2F1-206ENST00000598607 SLFN5Q08AF3 891 aa19.49■□□□□ 0.71
GTF2F1-206ENST00000598607 SMIM5Q71RC9 77 aa19.49■□□□□ 0.71
GTF2F1-206ENST00000598607 ZBED9Q6R2W3 1325 aa19.49■□□□□ 0.71
GTF2F1-206ENST00000598607 NBPF26B4DH59 902 aa19.48■□□□□ 0.71
GTF2F1-206ENST00000598607 ZPR1O75312 459 aa19.48■□□□□ 0.71
GTF2F1-206ENST00000598607 TWISTNBQ3B726 338 aaPredicted RBP19.48■□□□□ 0.71
GTF2F1-206ENST00000598607 NBPF10Q6P3W6 841 aaKnown RBP19.48■□□□□ 0.71
GTF2F1-206ENST00000598607 NBPF15Q8N660 670 aa19.48■□□□□ 0.71
GTF2F1-206ENST00000598607 ZBTB7AO95365 584 aa19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 PIP4K2AP48426 406 aaPredicted RBP19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 EXOSC9Q06265 439 aaKnown RBP19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 TSPYL6Q8N831 410 aa19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 NECTIN2Q92692 538 aa19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 SPON1Q9HCB6 807 aa19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 DDX21Q9NR30 783 aaKnown RBP eCLIP19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 DBF4Q9UBU7 674 aaPredicted RBP19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 NARFQ9UHQ1 456 aa19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 USP42Q9H9J4 1324 aaKnown RBP19.47■□□□□ 0.71
GTF2F1-206ENST00000598607 MYL6BP14649 208 aa19.46■□□□□ 0.71
GTF2F1-206ENST00000598607 CCDC30Q5VVM6 783 aa19.46■□□□□ 0.71
GTF2F1-206ENST00000598607 DZIP3Q86Y13 1208 aaKnown RBP19.45■□□□□ 0.7
GTF2F1-206ENST00000598607 CDCA7LQ96GN5 454 aa19.45■□□□□ 0.7
GTF2F1-206ENST00000598607 ARXQ96QS3 562 aa19.45■□□□□ 0.7
GTF2F1-206ENST00000598607 ANKRD36CQ5JPF3 1778 aa19.44■□□□□ 0.7
GTF2F1-206ENST00000598607 PDIA6Q15084 440 aa19.44■□□□□ 0.7
GTF2F1-206ENST00000598607 TRMT2AQ8IZ69 625 aaKnown RBP19.44■□□□□ 0.7
GTF2F1-206ENST00000598607 NLGN1Q8N2Q7 840 aa19.44■□□□□ 0.7
GTF2F1-206ENST00000598607 CHPF2Q9P2E5 772 aa19.44■□□□□ 0.7
GTF2F1-206ENST00000598607 ATF5Q9Y2D1 282 aaPredicted RBP19.44■□□□□ 0.7
GTF2F1-206ENST00000598607 GYS1P13807 737 aa19.43■□□□□ 0.7
GTF2F1-206ENST00000598607 POLD1P28340 1107 aa19.43■□□□□ 0.7
GTF2F1-206ENST00000598607 USPL1Q5W0Q7 1092 aa19.43■□□□□ 0.7
GTF2F1-206ENST00000598607 STK31Q9BXU1 1019 aa19.43■□□□□ 0.7
GTF2F1-206ENST00000598607 HYPKQ9NX55 129 aa19.43■□□□□ 0.7
GTF2F1-206ENST00000598607 SRP68Q9UHB9 627 aaKnown RBP19.43■□□□□ 0.7
GTF2F1-206ENST00000598607 TBC1D2BQ9UPU7 963 aa19.43■□□□□ 0.7
GTF2F1-206ENST00000598607 VAMP4O75379 141 aa19.42■□□□□ 0.7
GTF2F1-206ENST00000598607 KIF6Q6ZMV9 814 aa19.42■□□□□ 0.7
GTF2F1-206ENST00000598607 ARFGEF2Q9Y6D5 1785 aa19.42■□□□□ 0.7
GTF2F1-206ENST00000598607 AFDNP55196 1824 aaKnown RBP19.41■□□□□ 0.7
GTF2F1-206ENST00000598607 RGL2O15211 777 aa19.41■□□□□ 0.7
GTF2F1-206ENST00000598607 PROSER3Q2NL68 480 aa19.41■□□□□ 0.7
GTF2F1-206ENST00000598607 MSL1Q68DK7 614 aa19.41■□□□□ 0.7
GTF2F1-206ENST00000598607 ZNF652Q9Y2D9 606 aa19.41■□□□□ 0.7
GTF2F1-206ENST00000598607 CAMTA2O94983 1202 aa19.4■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms