RNA–Protein interactions for RNA: ENST00000598118.1

GRAMD1A-207, Transcript of GRAM domain containing 1A, humanhuman

TSL 1 (best)

Gene GRAMD1A, Length 2,277 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GRAMD1A-207ENST00000598118 NEK4P51957 841 aa23.97■■□□□ 1.43
GRAMD1A-207ENST00000598118 IL25Q9H293 177 aa23.97■■□□□ 1.43
GRAMD1A-207ENST00000598118 SRGAP3O43295 1099 aa23.96■■□□□ 1.43
GRAMD1A-207ENST00000598118 CWC22Q9HCG8 908 aaKnown RBP23.96■■□□□ 1.43
GRAMD1A-207ENST00000598118 ADCY9O60503 1353 aa23.96■■□□□ 1.43
GRAMD1A-207ENST00000598118 RNMTO43148 476 aaKnown RBP23.96■■□□□ 1.43
GRAMD1A-207ENST00000598118 RHPN1Q8TCX5 695 aa23.96■■□□□ 1.43
GRAMD1A-207ENST00000598118 ANO2Q9NQ90 1003 aa23.96■■□□□ 1.43
GRAMD1A-207ENST00000598118 ZDHHC9Q9Y397 364 aa23.96■■□□□ 1.43
GRAMD1A-207ENST00000598118 GOLGA6L22H0YM25 854 aa23.95■■□□□ 1.43
GRAMD1A-207ENST00000598118 SLIT3O75094 1523 aa23.95■■□□□ 1.43
GRAMD1A-207ENST00000598118 AOX1Q06278 1338 aa23.95■■□□□ 1.42
GRAMD1A-207ENST00000598118 NCAPD2Q15021 1401 aa23.95■■□□□ 1.42
GRAMD1A-207ENST00000598118 RAB11FIP3O75154 756 aa23.95■■□□□ 1.42
GRAMD1A-207ENST00000598118 LMOD2Q6P5Q4 547 aa23.95■■□□□ 1.42
GRAMD1A-207ENST00000598118 RRAGDQ9NQL2 400 aaPredicted RBP23.95■■□□□ 1.42
GRAMD1A-207ENST00000598118 AXIN2Q9Y2T1 843 aa23.95■■□□□ 1.42
GRAMD1A-207ENST00000598118 MCTP1Q6DN14 999 aa23.94■■□□□ 1.42
GRAMD1A-207ENST00000598118 ANKRD24Q8TF21 1146 aa23.94■■□□□ 1.42
GRAMD1A-207ENST00000598118 ISY1Q9ULR0 285 aaKnown RBP23.94■■□□□ 1.42
GRAMD1A-207ENST00000598118 AMOTQ4VCS5 1084 aa23.94■■□□□ 1.42
GRAMD1A-207ENST00000598118 NPHP4O75161 1426 aaPredicted RBP23.93■■□□□ 1.42
GRAMD1A-207ENST00000598118 MAP4K4O95819 1239 aaPredicted RBP23.93■■□□□ 1.42
GRAMD1A-207ENST00000598118 PI4K2BQ8TCG2 481 aa23.93■■□□□ 1.42
GRAMD1A-207ENST00000598118 PROSER3Q2NL68 480 aa23.93■■□□□ 1.42
GRAMD1A-207ENST00000598118 TMX3Q96JJ7 454 aa23.93■■□□□ 1.42
GRAMD1A-207ENST00000598118 RGPD5Q99666 1765 aa23.92■■□□□ 1.42
GRAMD1A-207ENST00000598118 PRAMEF22A3QJZ6 481 aa23.92■■□□□ 1.42
GRAMD1A-207ENST00000598118 KLHL40Q2TBA0 621 aa23.92■■□□□ 1.42
GRAMD1A-207ENST00000598118 C1orf141Q5JVX7 400 aa23.92■■□□□ 1.42
GRAMD1A-207ENST00000598118 DDX49Q9Y6V7 483 aaKnown RBP23.92■■□□□ 1.42
GRAMD1A-207ENST00000598118 DBF4Q9UBU7 674 aaPredicted RBP23.91■■□□□ 1.42
GRAMD1A-207ENST00000598118 ADAMTSL3P82987 1691 aa23.91■■□□□ 1.42
GRAMD1A-207ENST00000598118 TRPM3Q9HCF6 1732 aaPredicted RBP23.91■■□□□ 1.42
GRAMD1A-207ENST00000598118 GIGYF1O75420 1035 aaPredicted RBP23.9■■□□□ 1.42
GRAMD1A-207ENST00000598118 KIF1BPQ96EK5 621 aa23.9■■□□□ 1.42
GRAMD1A-207ENST00000598118 LMBRD1Q9NUN5 540 aa23.9■■□□□ 1.42
GRAMD1A-207ENST00000598118 MCCP23508 829 aa23.9■■□□□ 1.42
GRAMD1A-207ENST00000598118 ANAPC15P60006 121 aa23.89■■□□□ 1.42
GRAMD1A-207ENST00000598118 CHMP4AQ9BY43 222 aa23.89■■□□□ 1.42
GRAMD1A-207ENST00000598118 HEG1Q9ULI3 1381 aa23.89■■□□□ 1.41
GRAMD1A-207ENST00000598118 CHAMP1Q96JM3 812 aa23.89■■□□□ 1.41
GRAMD1A-207ENST00000598118 MAP3K2Q9Y2U5 619 aa23.89■■□□□ 1.41
GRAMD1A-207ENST00000598118 CAMTA1Q9Y6Y1 1673 aa23.89■■□□□ 1.41
GRAMD1A-207ENST00000598118 SIPA1L3O60292 1781 aaPredicted RBP23.88■■□□□ 1.41
GRAMD1A-207ENST00000598118 IL17RAQ96F46 866 aa23.88■■□□□ 1.41
GRAMD1A-207ENST00000598118 KRT28Q7Z3Y7 464 aa23.87■■□□□ 1.41
GRAMD1A-207ENST00000598118 NOL8Q76FK4 1167 aaKnown RBP23.86■■□□□ 1.41
GRAMD1A-207ENST00000598118 UPF3BQ9BZI7 483 aaKnown RBP23.86■■□□□ 1.41
GRAMD1A-207ENST00000598118 OVOS2A0A0G2JMS6 1433 aa23.86■■□□□ 1.41
GRAMD1A-207ENST00000598118 MCM2P49736 904 aa23.85■■□□□ 1.41
GRAMD1A-207ENST00000598118 CUL4AQ13619 759 aa23.85■■□□□ 1.41
GRAMD1A-207ENST00000598118 MTX1Q13505 466 aa23.85■■□□□ 1.41
GRAMD1A-207ENST00000598118 CWF19L2Q2TBE0 894 aaKnown RBP23.85■■□□□ 1.41
GRAMD1A-207ENST00000598118 KSR2Q6VAB6 950 aa23.85■■□□□ 1.41
GRAMD1A-207ENST00000598118 ANO8Q9HCE9 1232 aaPredicted RBP23.85■■□□□ 1.41
GRAMD1A-207ENST00000598118 HSPA4P34932 840 aa23.84■■□□□ 1.41
GRAMD1A-207ENST00000598118 SGSM2O43147 1006 aa23.83■■□□□ 1.41
GRAMD1A-207ENST00000598118 FOXD4L5Q5VV16 416 aaPredicted RBP23.83■■□□□ 1.41
GRAMD1A-207ENST00000598118 FOXD4L4Q8WXT5 416 aaPredicted RBP23.83■■□□□ 1.41
GRAMD1A-207ENST00000598118 PRPF40AO75400 957 aaKnown RBP23.82■■□□□ 1.4
GRAMD1A-207ENST00000598118 C9orf78Q9NZ63 289 aaPredicted RBP23.82■■□□□ 1.4
GRAMD1A-207ENST00000598118 CRYBG1Q9Y4K1 1723 aa23.82■■□□□ 1.4
GRAMD1A-207ENST00000598118 ALDH1L1O75891 902 aa23.82■■□□□ 1.4
GRAMD1A-207ENST00000598118 ZC3H6P61129 1189 aaKnown RBP23.82■■□□□ 1.4
GRAMD1A-207ENST00000598118 HSP90AB4PQ58FF6 505 aa23.82■■□□□ 1.4
GRAMD1A-207ENST00000598118 PROSER2Q86WR7 435 aaPredicted RBP23.82■■□□□ 1.4
GRAMD1A-207ENST00000598118 PA2G4Q9UQ80 394 aaKnown RBP23.82■■□□□ 1.4
GRAMD1A-207ENST00000598118 ADAMTS7Q9UKP4 1686 aa23.82■■□□□ 1.4
GRAMD1A-207ENST00000598118 NCLP19338 710 aaKnown RBP23.81■■□□□ 1.4
GRAMD1A-207ENST00000598118 CAVIN1Q6NZI2 390 aaKnown RBP23.81■■□□□ 1.4
GRAMD1A-207ENST00000598118 C1orf167Q5SNV9 1468 aa23.81■■□□□ 1.4
GRAMD1A-207ENST00000598118 ERBB3P21860 1342 aa23.81■■□□□ 1.4
GRAMD1A-207ENST00000598118 USP42Q9H9J4 1324 aaKnown RBP23.81■■□□□ 1.4
GRAMD1A-207ENST00000598118 EPB41L2O43491 1005 aaKnown RBP23.81■■□□□ 1.4
GRAMD1A-207ENST00000598118 OS9Q13438 667 aaPredicted RBP23.81■■□□□ 1.4
GRAMD1A-207ENST00000598118 CNTROBQ8N137 903 aa23.81■■□□□ 1.4
GRAMD1A-207ENST00000598118 GPT2Q8TD30 523 aa23.8■■□□□ 1.4
GRAMD1A-207ENST00000598118 RAD50Q92878 1312 aa23.8■■□□□ 1.4
GRAMD1A-207ENST00000598118 LSG1Q9H089 658 aaKnown RBP23.8■■□□□ 1.4
GRAMD1A-207ENST00000598118 PDIA6Q15084 440 aa23.79■■□□□ 1.4
GRAMD1A-207ENST00000598118 ZBTB4Q9P1Z0 1013 aaPredicted RBP23.79■■□□□ 1.4
GRAMD1A-207ENST00000598118 BRD1O95696 1058 aa23.79■■□□□ 1.4
GRAMD1A-207ENST00000598118 INTS4Q96HW7 963 aaKnown RBP23.79■■□□□ 1.4
GRAMD1A-207ENST00000598118 KAZALD1Q96I82 304 aa23.79■■□□□ 1.4
GRAMD1A-207ENST00000598118 HYPKQ9NX55 129 aa23.79■■□□□ 1.4
GRAMD1A-207ENST00000598118 AIMP1Q12904 312 aaKnown RBP23.78■■□□□ 1.4
GRAMD1A-207ENST00000598118 SLC39A6Q13433 755 aa23.78■■□□□ 1.4
GRAMD1A-207ENST00000598118 CWC27Q6UX04 472 aaKnown RBP23.78■■□□□ 1.4
GRAMD1A-207ENST00000598118 ALS2Q96Q42 1657 aa23.78■■□□□ 1.4
GRAMD1A-207ENST00000598118 TTC41PQ6P2S7 1318 aa23.78■■□□□ 1.4
GRAMD1A-207ENST00000598118 ZNF445P59923 1031 aa23.77■■□□□ 1.4
GRAMD1A-207ENST00000598118 ZSCAN23Q3MJ62 389 aa23.77■■□□□ 1.4
GRAMD1A-207ENST00000598118 CLASRPQ8N2M8 674 aaKnown RBP23.77■■□□□ 1.4
GRAMD1A-207ENST00000598118 DDX21Q9NR30 783 aaKnown RBP eCLIP23.77■■□□□ 1.4
GRAMD1A-207ENST00000598118 SNX14Q9Y5W7 946 aa23.77■■□□□ 1.4
GRAMD1A-207ENST00000598118 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP23.77■■□□□ 1.4
GRAMD1A-207ENST00000598118 KIF1AQ12756 1690 aa23.77■■□□□ 1.4
GRAMD1A-207ENST00000598118 RASEFQ8IZ41 740 aa23.76■■□□□ 1.39
GRAMD1A-207ENST00000598118 LINS1Q8NG48 757 aa23.76■■□□□ 1.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms