RNA–Protein interactions for RNA: ENST00000595897.5

ARHGEF1-213, Transcript of Rho guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best)

Gene ARHGEF1, Length 2,973 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF1-213ENST00000595897 AK2P54819 239 aa20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 ATP6V1DQ9Y5K8 247 aa20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 SNX14Q9Y5W7 946 aa20.91■□□□□ 0.94
ARHGEF1-213ENST00000595897 RAD50Q92878 1312 aa20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 RPAP1Q9BWH6 1393 aaPredicted RBP20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 SYT1P21579 422 aa20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 NOLC1Q14978 699 aaKnown RBP eCLIP20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 PPP1R42Q7Z4L9 355 aa20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 TMEM87AQ8NBN3 555 aa20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 PIBF1Q8WXW3 757 aa20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 LIMCH1Q9UPQ0 1083 aa20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 USP6P35125 1406 aa20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 GNAT3A8MTJ3 354 aa20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 SGSM2O43147 1006 aa20.9■□□□□ 0.94
ARHGEF1-213ENST00000595897 CWC27Q6UX04 472 aaKnown RBP20.89■□□□□ 0.94
ARHGEF1-213ENST00000595897 CNTROBQ8N137 903 aa20.89■□□□□ 0.94
ARHGEF1-213ENST00000595897 RAB11FIP3O75154 756 aa20.89■□□□□ 0.93
ARHGEF1-213ENST00000595897 PLEKHG5O94827 1062 aa20.89■□□□□ 0.93
ARHGEF1-213ENST00000595897 RHPN1Q8TCX5 695 aa20.89■□□□□ 0.93
ARHGEF1-213ENST00000595897 SSH3Q8TE77 659 aa20.89■□□□□ 0.93
ARHGEF1-213ENST00000595897 FLT4P35916 1363 aa20.89■□□□□ 0.93
ARHGEF1-213ENST00000595897 TECPR2O15040 1411 aa20.89■□□□□ 0.93
ARHGEF1-213ENST00000595897 MYRIPQ8NFW9 859 aa20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 SRGAP3O43295 1099 aa20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 RASEFQ8IZ41 740 aa20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 C17orf53Q8N3J3 647 aaPredicted RBP20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 SPG7Q9UQ90 795 aa20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 SPATA31D1Q6ZQQ2 1576 aa20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 AKAP12Q02952 1782 aa20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 FAM69CQ0P6D2 419 aa20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 HDGFL1Q5TGJ6 251 aa20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 USP31Q70CQ4 1352 aa20.88■□□□□ 0.93
ARHGEF1-213ENST00000595897 NRXN3Q9Y4C0 1643 aa20.87■□□□□ 0.93
ARHGEF1-213ENST00000595897 F13A1P00488 732 aa20.87■□□□□ 0.93
ARHGEF1-213ENST00000595897 CASTP20810 708 aaKnown RBP20.87■□□□□ 0.93
ARHGEF1-213ENST00000595897 HMGN5P82970 282 aaKnown RBP20.87■□□□□ 0.93
ARHGEF1-213ENST00000595897 RUFY3Q7L099 469 aa20.87■□□□□ 0.93
ARHGEF1-213ENST00000595897 PI4K2BQ8TCG2 481 aa20.87■□□□□ 0.93
ARHGEF1-213ENST00000595897 GIMAP6Q6P9H5 292 aa20.86■□□□□ 0.93
ARHGEF1-213ENST00000595897 KIF1BPQ96EK5 621 aa20.86■□□□□ 0.93
ARHGEF1-213ENST00000595897 PRIMPOLQ96LW4 560 aa20.86■□□□□ 0.93
ARHGEF1-213ENST00000595897 HTATSF1O43719 755 aaKnown RBP20.86■□□□□ 0.93
ARHGEF1-213ENST00000595897 CPA1P15085 419 aa20.86■□□□□ 0.93
ARHGEF1-213ENST00000595897 TTC14Q96N46 770 aa20.86■□□□□ 0.93
ARHGEF1-213ENST00000595897 PHAXQ9H814 394 aaKnown RBP20.86■□□□□ 0.93
ARHGEF1-213ENST00000595897 SBNO1A3KN83 1393 aa20.86■□□□□ 0.93
ARHGEF1-213ENST00000595897 KDM4AO75164 1064 aa20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 NGDNQ8NEJ9 315 aaKnown RBP20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 LSG1Q9H089 658 aaKnown RBP20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 PEAK1Q9H792 1746 aa20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 IGSF1Q8N6C5 1336 aa20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 DTNBO60941 627 aa20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 OS9Q13438 667 aaPredicted RBP20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 KDRP35968 1356 aa20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 CCDC83Q8IWF9 413 aa20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 TSC1Q92574 1164 aa20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 JARID2Q92833 1246 aaPredicted RBP20.85■□□□□ 0.93
ARHGEF1-213ENST00000595897 EIF2S2P20042 333 aaKnown RBP20.84■□□□□ 0.93
ARHGEF1-213ENST00000595897 DIAPH3Q9NSV4 1193 aa20.84■□□□□ 0.93
ARHGEF1-213ENST00000595897 TAF7Q15545 349 aaPredicted RBP20.84■□□□□ 0.93
ARHGEF1-213ENST00000595897 DNM1Q05193 864 aaKnown RBP20.83■□□□□ 0.93
ARHGEF1-213ENST00000595897 GJB2P29033 226 aa20.83■□□□□ 0.92
ARHGEF1-213ENST00000595897 VPS37CA5D8V6 355 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF1-213ENST00000595897 IL17REQ8NFR9 667 aa20.82■□□□□ 0.92
ARHGEF1-213ENST00000595897 LTV1Q96GA3 475 aaPredicted RBP20.82■□□□□ 0.92
ARHGEF1-213ENST00000595897 JAKMIP1Q96N16 626 aaKnown RBP20.82■□□□□ 0.92
ARHGEF1-213ENST00000595897 TTC21AQ8NDW8 1320 aa20.81■□□□□ 0.92
ARHGEF1-213ENST00000595897 RIMS1Q86UR5 1692 aaKnown RBP20.81■□□□□ 0.92
ARHGEF1-213ENST00000595897 TCHHQ07283 1943 aa20.81■□□□□ 0.92
ARHGEF1-213ENST00000595897 LARGE1O95461 756 aa20.81■□□□□ 0.92
ARHGEF1-213ENST00000595897 NBPF7P0C2Y1 421 aaPredicted RBP20.81■□□□□ 0.92
ARHGEF1-213ENST00000595897 RGPD1P0DJD0 1748 aa20.81■□□□□ 0.92
ARHGEF1-213ENST00000595897 POLA2Q14181 598 aa20.81■□□□□ 0.92
ARHGEF1-213ENST00000595897 PDRG1Q9NUG6 133 aa20.81■□□□□ 0.92
ARHGEF1-213ENST00000595897 RUFY2Q8WXA3 655 aa20.8■□□□□ 0.92
ARHGEF1-213ENST00000595897 CEP170BQ9Y4F5 1589 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF1-213ENST00000595897 CYB5RLQ6IPT4 315 aa20.8■□□□□ 0.92
ARHGEF1-213ENST00000595897 CCDC94Q9BW85 323 aaPredicted RBP20.8■□□□□ 0.92
ARHGEF1-213ENST00000595897 HYPKQ9NX55 129 aa20.8■□□□□ 0.92
ARHGEF1-213ENST00000595897 KIF3AQ9Y496 699 aa20.8■□□□□ 0.92
ARHGEF1-213ENST00000595897 NLRP6P59044 892 aa20.79■□□□□ 0.92
ARHGEF1-213ENST00000595897 PRPF40BQ6NWY9 871 aaKnown RBP20.79■□□□□ 0.92
ARHGEF1-213ENST00000595897 SPC24Q8NBT2 197 aa20.79■□□□□ 0.92
ARHGEF1-213ENST00000595897 HSP90AB4PQ58FF6 505 aa20.79■□□□□ 0.92
ARHGEF1-213ENST00000595897 CHMP3Q9Y3E7 222 aa20.79■□□□□ 0.92
ARHGEF1-213ENST00000595897 GLRX3O76003 335 aaKnown RBP20.79■□□□□ 0.92
ARHGEF1-213ENST00000595897 NUTM2GQ5VZR2 741 aa20.79■□□□□ 0.92
ARHGEF1-213ENST00000595897 CYP46A1Q9Y6A2 500 aa20.79■□□□□ 0.92
ARHGEF1-213ENST00000595897 AGLP35573 1532 aa20.78■□□□□ 0.92
ARHGEF1-213ENST00000595897 FAM177BA6PVY3 158 aa20.78■□□□□ 0.92
ARHGEF1-213ENST00000595897 DDX54Q8TDD1 881 aaKnown RBP20.78■□□□□ 0.92
ARHGEF1-213ENST00000595897 MTMR6Q9Y217 621 aa20.78■□□□□ 0.92
ARHGEF1-213ENST00000595897 MAP3K5Q99683 1374 aa20.78■□□□□ 0.92
ARHGEF1-213ENST00000595897 SLC26A8Q96RN1 970 aa20.78■□□□□ 0.92
ARHGEF1-213ENST00000595897 PRDM10Q9NQV6 1147 aa20.78■□□□□ 0.92
ARHGEF1-213ENST00000595897 TUBGCP6Q96RT7 1819 aa20.78■□□□□ 0.92
ARHGEF1-213ENST00000595897 CCDC192P0DO97 292 aa20.77■□□□□ 0.92
ARHGEF1-213ENST00000595897 CHAF1AQ13111 956 aaPredicted RBP20.77■□□□□ 0.92
ARHGEF1-213ENST00000595897 SPTLC3Q9NUV7 552 aa20.77■□□□□ 0.92
ARHGEF1-213ENST00000595897 KCNJ4P48050 445 aa20.77■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms