RNA–Protein interactions for RNA: ENST00000595231.5

SNRNP70-204, Transcript of small nuclear ribonucleoprotein U1 subunit 70, humanhuman

TSL 1 (best)

Gene SNRNP70, Length 1,673 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP70-204ENST00000595231 STARD3NLO95772 234 aa29.19■■■□□ 2.26
SNRNP70-204ENST00000595231 AKT1S1Q96B36 256 aa29.19■■■□□ 2.26
SNRNP70-204ENST00000595231 HOXB7P09629 217 aa29.18■■■□□ 2.26
SNRNP70-204ENST00000595231 HMGB2P26583 209 aaKnown RBP29.18■■■□□ 2.26
SNRNP70-204ENST00000595231 CRKLP46109 303 aaKnown RBP29.18■■■□□ 2.26
SNRNP70-204ENST00000595231 INTS5Q6P9B9 1019 aaKnown RBP29.18■■■□□ 2.26
SNRNP70-204ENST00000595231 ANO8Q9HCE9 1232 aaPredicted RBP29.18■■■□□ 2.26
SNRNP70-204ENST00000595231 LAMB4A4D0S4 1761 aa29.18■■■□□ 2.26
SNRNP70-204ENST00000595231 ZNF827Q17R98 1081 aa29.18■■■□□ 2.26
SNRNP70-204ENST00000595231 RC3H1Q5TC82 1133 aaKnown RBP29.18■■■□□ 2.26
SNRNP70-204ENST00000595231 CNTNAP4Q9C0A0 1308 aa29.17■■■□□ 2.26
SNRNP70-204ENST00000595231 TWISTNBQ3B726 338 aaPredicted RBP29.16■■■□□ 2.26
SNRNP70-204ENST00000595231 A1BGP04217 495 aa29.15■■■□□ 2.26
SNRNP70-204ENST00000595231 EIF2S2P20042 333 aaKnown RBP29.15■■■□□ 2.26
SNRNP70-204ENST00000595231 CCDC87Q9NVE4 849 aa29.15■■■□□ 2.26
SNRNP70-204ENST00000595231 SOS1Q07889 1333 aaPredicted RBP29.15■■■□□ 2.26
SNRNP70-204ENST00000595231 VAMP4O75379 141 aa29.14■■■□□ 2.26
SNRNP70-204ENST00000595231 SLC15A2Q16348 729 aa29.13■■■□□ 2.25
SNRNP70-204ENST00000595231 AMIGO3Q86WK7 504 aa29.13■■■□□ 2.25
SNRNP70-204ENST00000595231 ZBTB1Q9Y2K1 713 aa29.13■■■□□ 2.25
SNRNP70-204ENST00000595231 AK7Q96M32 723 aa29.12■■■□□ 2.25
SNRNP70-204ENST00000595231 NBPF26B4DH59 902 aa29.12■■■□□ 2.25
SNRNP70-204ENST00000595231 HDGFL1Q5TGJ6 251 aa29.12■■■□□ 2.25
SNRNP70-204ENST00000595231 NBPF14Q5TI25 921 aa29.12■■■□□ 2.25
SNRNP70-204ENST00000595231 NBPF10Q6P3W6 841 aaKnown RBP29.12■■■□□ 2.25
SNRNP70-204ENST00000595231 NBPF15Q8N660 670 aa29.12■■■□□ 2.25
SNRNP70-204ENST00000595231 NECTIN2Q92692 538 aa29.12■■■□□ 2.25
SNRNP70-204ENST00000595231 PIP4K2AP48426 406 aaPredicted RBP29.11■■■□□ 2.25
SNRNP70-204ENST00000595231 STK32BQ9NY57 414 aa29.11■■■□□ 2.25
SNRNP70-204ENST00000595231 UBR3Q6ZT12 1888 aa29.11■■■□□ 2.25
SNRNP70-204ENST00000595231 GNPATO15228 680 aa29.1■■■□□ 2.25
SNRNP70-204ENST00000595231 RPS6KA4O75676 772 aa29.1■■■□□ 2.25
SNRNP70-204ENST00000595231 CANXP27824 592 aaKnown RBP29.09■■■□□ 2.25
SNRNP70-204ENST00000595231 PDIA6Q15084 440 aa29.09■■■□□ 2.25
SNRNP70-204ENST00000595231 SMIM5Q71RC9 77 aa29.09■■■□□ 2.25
SNRNP70-204ENST00000595231 TFCP2L1Q9NZI6 479 aa29.09■■■□□ 2.25
SNRNP70-204ENST00000595231 TUBGCP6Q96RT7 1819 aa29.08■■■□□ 2.25
SNRNP70-204ENST00000595231 ERBB4Q15303 1308 aa29.07■■■□□ 2.24
SNRNP70-204ENST00000595231 RTCBQ9Y3I0 505 aaKnown RBP29.07■■■□□ 2.24
SNRNP70-204ENST00000595231 EIF5P55010 431 aaKnown RBP29.06■■■□□ 2.24
SNRNP70-204ENST00000595231 IL6STP40189 918 aaPredicted RBP29.05■■■□□ 2.24
SNRNP70-204ENST00000595231 PROSER3Q2NL68 480 aa29.05■■■□□ 2.24
SNRNP70-204ENST00000595231 LRP10Q7Z4F1 713 aa29.05■■■□□ 2.24
SNRNP70-204ENST00000595231 CHPF2Q9P2E5 772 aa29.05■■■□□ 2.24
SNRNP70-204ENST00000595231 CCDC30Q5VVM6 783 aa29.05■■■□□ 2.24
SNRNP70-204ENST00000595231 PNPLA7Q6ZV29 1317 aa29.04■■■□□ 2.24
SNRNP70-204ENST00000595231 SSFA2P28290 1259 aa29.04■■■□□ 2.24
SNRNP70-204ENST00000595231 DDX21Q9NR30 783 aaKnown RBP eCLIP29.04■■■□□ 2.24
SNRNP70-204ENST00000595231 DBF4Q9UBU7 674 aaPredicted RBP29.04■■■□□ 2.24
SNRNP70-204ENST00000595231 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.03■■■□□ 2.24
SNRNP70-204ENST00000595231 ANXA1P04083 346 aa29.03■■■□□ 2.24
SNRNP70-204ENST00000595231 MYL6BP14649 208 aa29.03■■■□□ 2.24
SNRNP70-204ENST00000595231 CHMP4AQ9BY43 222 aa29.03■■■□□ 2.24
SNRNP70-204ENST00000595231 QSER1Q2KHR3 1735 aa29.03■■■□□ 2.24
SNRNP70-204ENST00000595231 TCERG1O14776 1098 aaKnown RBP29.02■■■□□ 2.24
SNRNP70-204ENST00000595231 PHF14O94880 888 aa29.02■■■□□ 2.24
SNRNP70-204ENST00000595231 CT47B1P0C2W7 299 aaPredicted RBP29.02■■■□□ 2.24
SNRNP70-204ENST00000595231 R3HDM1Q15032 1099 aaKnown RBP29.02■■■□□ 2.24
SNRNP70-204ENST00000595231 ARHGEF1Q92888 912 aaKnown RBP29.02■■■□□ 2.24
SNRNP70-204ENST00000595231 TRAPPC3LQ5T215 181 aa29.01■■■□□ 2.23
SNRNP70-204ENST00000595231 COL23A1Q86Y22 540 aaPredicted RBP29.01■■■□□ 2.23
SNRNP70-204ENST00000595231 ADRA2BP18089 450 aa29■■■□□ 2.23
SNRNP70-204ENST00000595231 COL15A1P39059 1388 aa29■■■□□ 2.23
SNRNP70-204ENST00000595231 ZNF428Q96B54 188 aa28.99■■■□□ 2.23
SNRNP70-204ENST00000595231 PDGFDQ9GZP0 370 aaPredicted RBP28.99■■■□□ 2.23
SNRNP70-204ENST00000595231 ZNF330Q9Y3S2 320 aaPredicted RBP28.99■■■□□ 2.23
SNRNP70-204ENST00000595231 FLAD1Q8NFF5 587 aa28.99■■■□□ 2.23
SNRNP70-204ENST00000595231 SLC4A2P04920 1241 aa28.97■■■□□ 2.23
SNRNP70-204ENST00000595231 STK31Q9BXU1 1019 aa28.97■■■□□ 2.23
SNRNP70-204ENST00000595231 HYPKQ9NX55 129 aa28.97■■■□□ 2.23
SNRNP70-204ENST00000595231 C4AP0C0L4 1744 aa28.96■■■□□ 2.23
SNRNP70-204ENST00000595231 PSDA5PKW4 1024 aaPredicted RBP28.96■■■□□ 2.23
SNRNP70-204ENST00000595231 SSH1Q8WYL5 1049 aa28.96■■■□□ 2.23
SNRNP70-204ENST00000595231 PHAXQ9H814 394 aaKnown RBP28.96■■■□□ 2.23
SNRNP70-204ENST00000595231 CACNA1FO60840 1977 aa28.95■■■□□ 2.23
SNRNP70-204ENST00000595231 TBC1D2BQ9UPU7 963 aa28.95■■■□□ 2.22
SNRNP70-204ENST00000595231 RFC4P35249 363 aa28.94■■■□□ 2.22
SNRNP70-204ENST00000595231 TTLL7Q6ZT98 887 aa28.94■■■□□ 2.22
SNRNP70-204ENST00000595231 COPS6Q7L5N1 327 aa28.94■■■□□ 2.22
SNRNP70-204ENST00000595231 A0A087WZG4 1122 aa28.93■■■□□ 2.22
SNRNP70-204ENST00000595231 RARSP54136 660 aaKnown RBP28.93■■■□□ 2.22
SNRNP70-204ENST00000595231 ALDH1L2Q3SY69 923 aa28.93■■■□□ 2.22
SNRNP70-204ENST00000595231 NPM2Q86SE8 214 aaKnown RBP28.93■■■□□ 2.22
SNRNP70-204ENST00000595231 DZIP3Q86Y13 1208 aaKnown RBP28.93■■■□□ 2.22
SNRNP70-204ENST00000595231 XAGE3Q8WTP9 111 aa28.93■■■□□ 2.22
SNRNP70-204ENST00000595231 G2E3Q7L622 706 aa28.93■■■□□ 2.22
SNRNP70-204ENST00000595231 NARFQ9UHQ1 456 aa28.93■■■□□ 2.22
SNRNP70-204ENST00000595231 USP42Q9H9J4 1324 aaKnown RBP28.92■■■□□ 2.22
SNRNP70-204ENST00000595231 SRP68Q9UHB9 627 aaKnown RBP28.92■■■□□ 2.22
SNRNP70-204ENST00000595231 CASZ1Q86V15 1759 aa28.91■■■□□ 2.22
SNRNP70-204ENST00000595231 AIMP1Q12904 312 aaKnown RBP28.91■■■□□ 2.22
SNRNP70-204ENST00000595231 MRPL50Q8N5N7 158 aaKnown RBP28.91■■■□□ 2.22
SNRNP70-204ENST00000595231 BCL2L13Q9BXK5 485 aa28.91■■■□□ 2.22
SNRNP70-204ENST00000595231 MSH5O43196 834 aa28.9■■■□□ 2.22
SNRNP70-204ENST00000595231 ARXQ96QS3 562 aa28.9■■■□□ 2.22
SNRNP70-204ENST00000595231 CAMTA2O94983 1202 aa28.89■■■□□ 2.22
SNRNP70-204ENST00000595231 USPL1Q5W0Q7 1092 aa28.89■■■□□ 2.21
SNRNP70-204ENST00000595231 BCL2L12Q9HB09 334 aa28.89■■■□□ 2.21
SNRNP70-204ENST00000595231 ZPR1O75312 459 aa28.88■■■□□ 2.21
SNRNP70-204ENST00000595231 GYS1P13807 737 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms