RNA–Protein interactions for RNA: ENST00000594213.5

GTF2F1-203, Transcript of general transcription factor IIF subunit 1, humanhuman

TSL 3

Gene GTF2F1, Length 1,002 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2F1-203ENST00000594213 NFIXQ14938 502 aa21.51■■□□□ 1.03
GTF2F1-203ENST00000594213 C9orf131Q5VYM1 1079 aa21.51■■□□□ 1.03
GTF2F1-203ENST00000594213 COL3A1P02461 1466 aaPredicted RBP21.51■■□□□ 1.03
GTF2F1-203ENST00000594213 IL17REQ8NFR9 667 aa21.5■■□□□ 1.03
GTF2F1-203ENST00000594213 NMRK2Q9NPI5 230 aa21.49■■□□□ 1.03
GTF2F1-203ENST00000594213 COL15A1P39059 1388 aa21.48■■□□□ 1.03
GTF2F1-203ENST00000594213 BRCA1P38398 1863 aaKnown RBP21.48■■□□□ 1.03
GTF2F1-203ENST00000594213 TOMM70O94826 608 aa21.48■■□□□ 1.03
GTF2F1-203ENST00000594213 EIF5P55010 431 aaKnown RBP21.47■■□□□ 1.03
GTF2F1-203ENST00000594213 ZNF496Q96IT1 587 aaPredicted RBP21.46■■□□□ 1.03
GTF2F1-203ENST00000594213 GNAT3A8MTJ3 354 aa21.45■■□□□ 1.02
GTF2F1-203ENST00000594213 SERPINB2P05120 415 aa21.45■■□□□ 1.02
GTF2F1-203ENST00000594213 GAS2L2Q8NHY3 880 aa21.45■■□□□ 1.02
GTF2F1-203ENST00000594213 U2SURPO15042 1029 aaKnown RBP21.44■■□□□ 1.02
GTF2F1-203ENST00000594213 STARD3NLO95772 234 aa21.44■■□□□ 1.02
GTF2F1-203ENST00000594213 CANXP27824 592 aaKnown RBP21.44■■□□□ 1.02
GTF2F1-203ENST00000594213 ZNF790Q6PG37 636 aa21.44■■□□□ 1.02
GTF2F1-203ENST00000594213 TTC5Q8N0Z6 440 aa21.43■■□□□ 1.02
GTF2F1-203ENST00000594213 APLP1P51693 650 aa21.42■■□□□ 1.02
GTF2F1-203ENST00000594213 DNAJC5GQ8N7S2 189 aa21.42■■□□□ 1.02
GTF2F1-203ENST00000594213 PHACTR3Q96KR7 559 aa21.42■■□□□ 1.02
GTF2F1-203ENST00000594213 RNF181Q9P0P0 153 aa21.42■■□□□ 1.02
GTF2F1-203ENST00000594213 HEG1Q9ULI3 1381 aa21.42■■□□□ 1.02
GTF2F1-203ENST00000594213 ARFGEF1Q9Y6D6 1849 aa21.42■■□□□ 1.02
GTF2F1-203ENST00000594213 CEMIPQ8WUJ3 1361 aa21.41■■□□□ 1.02
GTF2F1-203ENST00000594213 TEFQ10587 303 aa21.41■■□□□ 1.02
GTF2F1-203ENST00000594213 RBM46Q8TBY0 533 aaKnown RBP21.41■■□□□ 1.02
GTF2F1-203ENST00000594213 TEX13AQ9BXU3 409 aaPredicted RBP21.41■■□□□ 1.02
GTF2F1-203ENST00000594213 A0A087WZG4 1122 aa21.4■■□□□ 1.02
GTF2F1-203ENST00000594213 CNGB1Q14028 1251 aaPredicted RBP21.4■■□□□ 1.02
GTF2F1-203ENST00000594213 IFFO2Q5TF58 517 aa21.4■■□□□ 1.02
GTF2F1-203ENST00000594213 NRXN2Q9P2S2 1712 aa21.39■■□□□ 1.01
GTF2F1-203ENST00000594213 PRELPP51888 382 aa21.39■■□□□ 1.01
GTF2F1-203ENST00000594213 RSPH6AQ9H0K4 717 aa21.39■■□□□ 1.01
GTF2F1-203ENST00000594213 UBR2Q8IWV8 1755 aa21.38■■□□□ 1.01
GTF2F1-203ENST00000594213 CARMIL3Q8ND23 1372 aa21.38■■□□□ 1.01
GTF2F1-203ENST00000594213 TBC1D9BQ66K14 1250 aa21.38■■□□□ 1.01
GTF2F1-203ENST00000594213 TTLL6Q8N841 843 aa21.38■■□□□ 1.01
GTF2F1-203ENST00000594213 KDM2BQ8NHM5 1336 aa21.37■■□□□ 1.01
GTF2F1-203ENST00000594213 KCNQ3O43525 872 aa21.37■■□□□ 1.01
GTF2F1-203ENST00000594213 PRKAR2BP31323 418 aa21.37■■□□□ 1.01
GTF2F1-203ENST00000594213 IL6STP40189 918 aaPredicted RBP21.37■■□□□ 1.01
GTF2F1-203ENST00000594213 RASSF7Q02833 373 aa21.37■■□□□ 1.01
GTF2F1-203ENST00000594213 C2CD5Q86YS7 1000 aa21.37■■□□□ 1.01
GTF2F1-203ENST00000594213 A1BGP04217 495 aa21.36■■□□□ 1.01
GTF2F1-203ENST00000594213 BICDL1Q6ZP65 573 aa21.36■■□□□ 1.01
GTF2F1-203ENST00000594213 FMNL2Q96PY5 1086 aa21.36■■□□□ 1.01
GTF2F1-203ENST00000594213 RRAGCQ9HB90 399 aa21.36■■□□□ 1.01
GTF2F1-203ENST00000594213 TBC1D2BQ9UPU7 963 aa21.36■■□□□ 1.01
GTF2F1-203ENST00000594213 ZC3H4Q9UPT8 1303 aaKnown RBP21.35■■□□□ 1.01
GTF2F1-203ENST00000594213 H0YIN7 160 aa21.35■■□□□ 1.01
GTF2F1-203ENST00000594213 FSTL1Q12841 308 aa21.35■■□□□ 1.01
GTF2F1-203ENST00000594213 CAMTA2O94983 1202 aa21.34■■□□□ 1.01
GTF2F1-203ENST00000594213 LMNB1P20700 586 aa21.34■■□□□ 1.01
GTF2F1-203ENST00000594213 BRIP1Q9BX63 1249 aa21.34■■□□□ 1.01
GTF2F1-203ENST00000594213 AFDNP55196 1824 aaKnown RBP21.34■■□□□ 1.01
GTF2F1-203ENST00000594213 BTBD11A6QL63 1104 aa21.33■■□□□ 1.01
GTF2F1-203ENST00000594213 NFKBIEO00221 500 aa21.33■■□□□ 1.01
GTF2F1-203ENST00000594213 PRR5LQ6MZQ0 368 aa21.33■■□□□ 1.01
GTF2F1-203ENST00000594213 CFAP53Q96M91 514 aa21.33■■□□□ 1.01
GTF2F1-203ENST00000594213 PPP2R1AP30153 589 aa21.32■■□□□ 1
GTF2F1-203ENST00000594213 C16orf71Q8IYS4 520 aaPredicted RBP21.32■■□□□ 1
GTF2F1-203ENST00000594213 PDZRN3Q9UPQ7 1066 aa21.32■■□□□ 1
GTF2F1-203ENST00000594213 USP16Q9Y5T5 823 aa21.32■■□□□ 1
GTF2F1-203ENST00000594213 VIRMAQ69YN4 1812 aaKnown RBP21.32■■□□□ 1
GTF2F1-203ENST00000594213 NUDCQ9Y266 331 aa21.31■■□□□ 1
GTF2F1-203ENST00000594213 GLTPD2A6NH11 291 aa21.3■■□□□ 1
GTF2F1-203ENST00000594213 PDE6BP35913 854 aa21.3■■□□□ 1
GTF2F1-203ENST00000594213 CCDC24Q8N4L8 307 aa21.3■■□□□ 1
GTF2F1-203ENST00000594213 SBF1O95248 1867 aa21.29■■□□□ 1
GTF2F1-203ENST00000594213 SIPA1L3O60292 1781 aaPredicted RBP21.29■■□□□ 1
GTF2F1-203ENST00000594213 ZNF330Q9Y3S2 320 aaPredicted RBP21.29■■□□□ 1
GTF2F1-203ENST00000594213 PRAMEF22A3QJZ6 481 aa21.28■■□□□ 1
GTF2F1-203ENST00000594213 U2AF1L5P0DN76 240 aaPredicted RBP21.28■■□□□ 1
GTF2F1-203ENST00000594213 U2AF1Q01081 240 aaKnown RBP eCLIP21.28■■□□□ 1
GTF2F1-203ENST00000594213 SETDB2Q96T68 719 aa21.28■■□□□ 1
GTF2F1-203ENST00000594213 HTRA3P83110 453 aa21.27■■□□□ 1
GTF2F1-203ENST00000594213 MCM10Q7L590 875 aa21.27■■□□□ 1
GTF2F1-203ENST00000594213 DZIP3Q86Y13 1208 aaKnown RBP21.27■■□□□ 1
GTF2F1-203ENST00000594213 ZNF622Q969S3 477 aaKnown RBP eCLIP21.27■■□□□ 17e-7■■■□□ 16.7
GTF2F1-203ENST00000594213 HTATSF1O43719 755 aaKnown RBP21.26■□□□□ 0.99
GTF2F1-203ENST00000594213 SNRPA1P09661 255 aaKnown RBP21.26■□□□□ 0.99
GTF2F1-203ENST00000594213 VEGFAP15692 232 aaPredicted RBP21.26■□□□□ 0.99
GTF2F1-203ENST00000594213 DLEC1Q9Y238 1755 aa21.25■□□□□ 0.99
GTF2F1-203ENST00000594213 POTECB2RU33 542 aa21.25■□□□□ 0.99
GTF2F1-203ENST00000594213 C21orf2O43822 256 aa21.25■□□□□ 0.99
GTF2F1-203ENST00000594213 PIP4K2AP48426 406 aaPredicted RBP21.25■□□□□ 0.99
GTF2F1-203ENST00000594213 CLEC4GQ6UXB4 293 aa21.25■□□□□ 0.99
GTF2F1-203ENST00000594213 CNBD1Q8NA66 436 aa21.25■□□□□ 0.99
GTF2F1-203ENST00000594213 SMC1BQ8NDV3 1235 aa21.25■□□□□ 0.99
GTF2F1-203ENST00000594213 KLRG1Q96E93 195 aa21.25■□□□□ 0.99
GTF2F1-203ENST00000594213 SCN7AQ01118 1682 aa21.24■□□□□ 0.99
GTF2F1-203ENST00000594213 NBPF26B4DH59 902 aa21.24■□□□□ 0.99
GTF2F1-203ENST00000594213 SRGNP10124 158 aa21.24■□□□□ 0.99
GTF2F1-203ENST00000594213 DCTN1Q14203 1278 aa21.24■□□□□ 0.99
GTF2F1-203ENST00000594213 STYK1Q6J9G0 422 aa21.24■□□□□ 0.99
GTF2F1-203ENST00000594213 NBPF10Q6P3W6 841 aaKnown RBP21.24■□□□□ 0.99
GTF2F1-203ENST00000594213 NPM2Q86SE8 214 aaKnown RBP21.24■□□□□ 0.99
GTF2F1-203ENST00000594213 NBPF15Q8N660 670 aa21.24■□□□□ 0.99
GTF2F1-203ENST00000594213 JMYQ8N9B5 988 aa21.24■□□□□ 0.99
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms