RNA–Protein interactions for RNA: ENST00000594067.5

LIG1-206, Transcript of DNA ligase 1, humanhuman

TSL 2

Gene LIG1, Length 2,697 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-206ENST00000594067 EIF2AK3Q9NZJ5 1116 aaKnown RBP20.03■□□□□ 0.8
LIG1-206ENST00000594067 PDCL3Q9H2J4 239 aa20.03■□□□□ 0.8
LIG1-206ENST00000594067 KCNA6P17658 529 aa20.02■□□□□ 0.8
LIG1-206ENST00000594067 TERF1P54274 439 aa20.02■□□□□ 0.8
LIG1-206ENST00000594067 BABAM1Q9NWV8 329 aa20.02■□□□□ 0.8
LIG1-206ENST00000594067 ARHGAP23Q9P227 1491 aa20.02■□□□□ 0.79
LIG1-206ENST00000594067 TUBGCP6Q96RT7 1819 aa20.01■□□□□ 0.79
LIG1-206ENST00000594067 SYCE3A1L190 88 aa20.01■□□□□ 0.79
LIG1-206ENST00000594067 ZNF500O60304 480 aaPredicted RBP20.01■□□□□ 0.79
LIG1-206ENST00000594067 SLIT1O75093 1534 aa20.01■□□□□ 0.79
LIG1-206ENST00000594067 PXDNLA1KZ92 1463 aa20■□□□□ 0.79
LIG1-206ENST00000594067 FOXD4L6Q3SYB3 417 aaPredicted RBP20■□□□□ 0.79
LIG1-206ENST00000594067 FOXD4L3Q6VB84 417 aaPredicted RBP20■□□□□ 0.79
LIG1-206ENST00000594067 AOX1Q06278 1338 aa20■□□□□ 0.79
LIG1-206ENST00000594067 RHPN1Q8TCX5 695 aa19.99■□□□□ 0.79
LIG1-206ENST00000594067 LGR6Q9HBX8 967 aa19.99■□□□□ 0.79
LIG1-206ENST00000594067 SRGAP3O43295 1099 aa19.99■□□□□ 0.79
LIG1-206ENST00000594067 NBPF7P0C2Y1 421 aaPredicted RBP19.99■□□□□ 0.79
LIG1-206ENST00000594067 LRSAM1Q6UWE0 723 aa19.99■□□□□ 0.79
LIG1-206ENST00000594067 INTS4Q96HW7 963 aaKnown RBP19.99■□□□□ 0.79
LIG1-206ENST00000594067 RAB11FIP3O75154 756 aa19.99■□□□□ 0.79
LIG1-206ENST00000594067 POLA2Q14181 598 aa19.99■□□□□ 0.79
LIG1-206ENST00000594067 THEMISQ8N1K5 641 aaPredicted RBP19.99■□□□□ 0.79
LIG1-206ENST00000594067 ZBTB7CA1YPR0 619 aa19.98■□□□□ 0.79
LIG1-206ENST00000594067 ANXA1P04083 346 aa19.98■□□□□ 0.79
LIG1-206ENST00000594067 PI4K2BQ8TCG2 481 aa19.98■□□□□ 0.79
LIG1-206ENST00000594067 PKNOX2Q96KN3 472 aa19.98■□□□□ 0.79
LIG1-206ENST00000594067 CHPF2Q9P2E5 772 aa19.98■□□□□ 0.79
LIG1-206ENST00000594067 ANKARQ7Z5J8 1434 aa19.98■□□□□ 0.79
LIG1-206ENST00000594067 KCNQ3O43525 872 aa19.97■□□□□ 0.79
LIG1-206ENST00000594067 HSPA4P34932 840 aa19.97■□□□□ 0.79
LIG1-206ENST00000594067 EIF4A1P60842 406 aaKnown RBP19.97■□□□□ 0.79
LIG1-206ENST00000594067 NBPF6Q5VWK0 638 aa19.97■□□□□ 0.79
LIG1-206ENST00000594067 NBPF4Q96M43 638 aa19.97■□□□□ 0.79
LIG1-206ENST00000594067 R3HCC1Q9Y3T6 440 aaKnown RBP19.97■□□□□ 0.79
LIG1-206ENST00000594067 MBD3O95983 291 aa19.96■□□□□ 0.79
LIG1-206ENST00000594067 IL17RAQ96F46 866 aa19.96■□□□□ 0.79
LIG1-206ENST00000594067 MARF1Q9Y4F3 1742 aaKnown RBP19.96■□□□□ 0.79
LIG1-206ENST00000594067 PI4KAP2A4QPH2 592 aa19.96■□□□□ 0.79
LIG1-206ENST00000594067 XPCQ01831 940 aaPredicted RBP19.96■□□□□ 0.79
LIG1-206ENST00000594067 PI4KAP1Q8N8J0 262 aa19.96■□□□□ 0.79
LIG1-206ENST00000594067 KIF1BPQ96EK5 621 aa19.96■□□□□ 0.79
LIG1-206ENST00000594067 ZKSCAN5Q9Y2L8 839 aa19.96■□□□□ 0.79
LIG1-206ENST00000594067 GDPD2Q9HCC8 539 aa19.95■□□□□ 0.78
LIG1-206ENST00000594067 BEND3Q5T5X7 828 aa19.95■□□□□ 0.78
LIG1-206ENST00000594067 DNAAF4Q8WXU2 420 aa19.95■□□□□ 0.78
LIG1-206ENST00000594067 CEMIPQ8WUJ3 1361 aa19.95■□□□□ 0.78
LIG1-206ENST00000594067 SGSM2O43147 1006 aa19.94■□□□□ 0.78
LIG1-206ENST00000594067 RBM33Q96EV2 1170 aaKnown RBP19.94■□□□□ 0.78
LIG1-206ENST00000594067 CACNA1FO60840 1977 aa19.94■□□□□ 0.78
LIG1-206ENST00000594067 RNF214Q8ND24 703 aa19.93■□□□□ 0.78
LIG1-206ENST00000594067 IP6K1Q92551 441 aa19.93■□□□□ 0.78
LIG1-206ENST00000594067 PHF8Q9UPP1 1060 aa19.93■□□□□ 0.78
LIG1-206ENST00000594067 RAD50Q92878 1312 aa19.92■□□□□ 0.78
LIG1-206ENST00000594067 RBM10P98175 930 aaKnown RBP19.92■□□□□ 0.78
LIG1-206ENST00000594067 CNTROBQ8N137 903 aa19.92■□□□□ 0.78
LIG1-206ENST00000594067 LARP6Q9BRS8 491 aaKnown RBP19.92■□□□□ 0.78
LIG1-206ENST00000594067 SNX14Q9Y5W7 946 aa19.92■□□□□ 0.78
LIG1-206ENST00000594067 N4BP2Q86UW6 1770 aaPredicted RBP19.92■□□□□ 0.78
LIG1-206ENST00000594067 MCM5P33992 734 aa19.92■□□□□ 0.78
LIG1-206ENST00000594067 EPB41L2O43491 1005 aaKnown RBP19.91■□□□□ 0.78
LIG1-206ENST00000594067 GADD45BO75293 160 aaPredicted RBP19.91■□□□□ 0.78
LIG1-206ENST00000594067 CWC27Q6UX04 472 aaKnown RBP19.91■□□□□ 0.78
LIG1-206ENST00000594067 RASEFQ8IZ41 740 aa19.91■□□□□ 0.78
LIG1-206ENST00000594067 LSG1Q9H089 658 aaKnown RBP19.91■□□□□ 0.78
LIG1-206ENST00000594067 OS9Q13438 667 aaPredicted RBP19.91■□□□□ 0.78
LIG1-206ENST00000594067 LRRC59Q96AG4 307 aaKnown RBP19.91■□□□□ 0.78
LIG1-206ENST00000594067 SPG7Q9UQ90 795 aa19.91■□□□□ 0.78
LIG1-206ENST00000594067 BTBD11A6QL63 1104 aa19.9■□□□□ 0.78
LIG1-206ENST00000594067 PLEKHG5O94827 1062 aa19.9■□□□□ 0.78
LIG1-206ENST00000594067 TEFQ10587 303 aa19.9■□□□□ 0.78
LIG1-206ENST00000594067 MPRIPQ6WCQ1 1025 aa19.9■□□□□ 0.78
LIG1-206ENST00000594067 WDR33Q9C0J8 1336 aaKnown RBP19.9■□□□□ 0.78
LIG1-206ENST00000594067 ZNF530Q6P9A1 599 aaPredicted RBP19.89■□□□□ 0.78
LIG1-206ENST00000594067 USP48Q86UV5 1035 aa19.89■□□□□ 0.78
LIG1-206ENST00000594067 HOXB7P09629 217 aa19.89■□□□□ 0.77
LIG1-206ENST00000594067 CCDC39Q9UFE4 941 aa19.89■□□□□ 0.77
LIG1-206ENST00000594067 AK2P54819 239 aa19.89■□□□□ 0.77
LIG1-206ENST00000594067 ADCY9O60503 1353 aa19.88■□□□□ 0.77
LIG1-206ENST00000594067 TTC14Q96N46 770 aa19.88■□□□□ 0.77
LIG1-206ENST00000594067 RPAP1Q9BWH6 1393 aaPredicted RBP19.88■□□□□ 0.77
LIG1-206ENST00000594067 CPA1P15085 419 aa19.88■□□□□ 0.77
LIG1-206ENST00000594067 TPRNQ4KMQ1 711 aa19.88■□□□□ 0.77
LIG1-206ENST00000594067 HSP90AB4PQ58FF6 505 aa19.88■□□□□ 0.77
LIG1-206ENST00000594067 TSPY26PQ9H489 355 aa19.88■□□□□ 0.77
LIG1-206ENST00000594067 CSPP1Q1MSJ5 1256 aa19.87■□□□□ 0.77
LIG1-206ENST00000594067 UQCRHLA0A096LP55 91 aa19.87■□□□□ 0.77
LIG1-206ENST00000594067 UQCRHP07919 91 aa19.87■□□□□ 0.77
LIG1-206ENST00000594067 SYAP1Q96A49 352 aaPredicted RBP19.87■□□□□ 0.77
LIG1-206ENST00000594067 FAM13BQ9NYF5 915 aa19.87■□□□□ 0.77
LIG1-206ENST00000594067 SETD1BQ9UPS6 1966 aaKnown RBP19.86■□□□□ 0.77
LIG1-206ENST00000594067 AKAP4Q5JQC9 854 aa19.86■□□□□ 0.77
LIG1-206ENST00000594067 RUFY3Q7L099 469 aa19.86■□□□□ 0.77
LIG1-206ENST00000594067 USP54Q70EL1 1684 aa19.86■□□□□ 0.77
LIG1-206ENST00000594067 PA2G4Q9UQ80 394 aaKnown RBP19.86■□□□□ 0.77
LIG1-206ENST00000594067 MAP3K2Q9Y2U5 619 aa19.86■□□□□ 0.77
LIG1-206ENST00000594067 MED1Q15648 1581 aaPredicted RBP19.86■□□□□ 0.77
LIG1-206ENST00000594067 GLRX3O76003 335 aaKnown RBP19.85■□□□□ 0.77
LIG1-206ENST00000594067 PSME1Q06323 249 aa19.85■□□□□ 0.77
LIG1-206ENST00000594067 PROSER3Q2NL68 480 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms