RNA–Protein interactions for RNA: ENST00000592804.1

PTBP1-218, Transcript of polypyrimidine tract binding protein 1, humanhuman

TSL 2

Gene PTBP1, Length 742 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-218ENST00000592804 MSL1Q68DK7 614 aa25.57■■□□□ 1.68
PTBP1-218ENST00000592804 ZBTB1Q9Y2K1 713 aa25.57■■□□□ 1.68
PTBP1-218ENST00000592804 ARHGEF1Q92888 912 aaKnown RBP25.56■■□□□ 1.68
PTBP1-218ENST00000592804 ADRA2BP18089 450 aa25.55■■□□□ 1.68
PTBP1-218ENST00000592804 TEX13AQ9BXU3 409 aaPredicted RBP25.55■■□□□ 1.68
PTBP1-218ENST00000592804 PPP1R1BQ9UD71 204 aaPredicted RBP25.55■■□□□ 1.68
PTBP1-218ENST00000592804 SOS1Q07889 1333 aaPredicted RBP25.55■■□□□ 1.68
PTBP1-218ENST00000592804 SENP3-EIF4A1A0A087X0R7 540 aa25.54■■□□□ 1.68
PTBP1-218ENST00000592804 STARD3NLO95772 234 aa25.54■■□□□ 1.68
PTBP1-218ENST00000592804 TSPYL4Q9UJ04 414 aa25.54■■□□□ 1.68
PTBP1-218ENST00000592804 SNRPA1P09661 255 aaKnown RBP25.53■■□□□ 1.68
PTBP1-218ENST00000592804 EIF4A1P60842 406 aaKnown RBP25.53■■□□□ 1.68
PTBP1-218ENST00000592804 FAM9BQ8IZU0 186 aa25.53■■□□□ 1.68
PTBP1-218ENST00000592804 USP16Q9Y5T5 823 aa25.53■■□□□ 1.68
PTBP1-218ENST00000592804 BCORQ6W2J9 1755 aa25.53■■□□□ 1.68
PTBP1-218ENST00000592804 CANXP27824 592 aaKnown RBP25.52■■□□□ 1.68
PTBP1-218ENST00000592804 SCN7AQ01118 1682 aa25.52■■□□□ 1.68
PTBP1-218ENST00000592804 POLD1P28340 1107 aa25.51■■□□□ 1.67
PTBP1-218ENST00000592804 RFC4P35249 363 aa25.51■■□□□ 1.67
PTBP1-218ENST00000592804 COL15A1P39059 1388 aa25.51■■□□□ 1.67
PTBP1-218ENST00000592804 A1BGP04217 495 aa25.5■■□□□ 1.67
PTBP1-218ENST00000592804 ARXQ96QS3 562 aa25.5■■□□□ 1.67
PTBP1-218ENST00000592804 BABAM1Q9NWV8 329 aa25.5■■□□□ 1.67
PTBP1-218ENST00000592804 DIEXFQ68CQ4 756 aaKnown RBP25.49■■□□□ 1.67
PTBP1-218ENST00000592804 SRP68Q9UHB9 627 aaKnown RBP25.49■■□□□ 1.67
PTBP1-218ENST00000592804 LAS1LQ9Y4W2 734 aaKnown RBP25.49■■□□□ 1.67
PTBP1-218ENST00000592804 AFDNP55196 1824 aaKnown RBP25.49■■□□□ 1.67
PTBP1-218ENST00000592804 GIGYF1O75420 1035 aaPredicted RBP25.48■■□□□ 1.67
PTBP1-218ENST00000592804 USP42Q9H9J4 1324 aaKnown RBP25.47■■□□□ 1.67
PTBP1-218ENST00000592804 CHL1O00533 1208 aa25.47■■□□□ 1.67
PTBP1-218ENST00000592804 EIF5P55010 431 aaKnown RBP25.47■■□□□ 1.67
PTBP1-218ENST00000592804 KIF13BQ9NQT8 1826 aa25.47■■□□□ 1.67
PTBP1-218ENST00000592804 GYS1P13807 737 aa25.46■■□□□ 1.67
PTBP1-218ENST00000592804 PIP4K2AP48426 406 aaPredicted RBP25.46■■□□□ 1.67
PTBP1-218ENST00000592804 NUP98P52948 1817 aa25.44■■□□□ 1.66
PTBP1-218ENST00000592804 CCER2I3L3R5 266 aa25.44■■□□□ 1.66
PTBP1-218ENST00000592804 IL6STP40189 918 aaPredicted RBP25.44■■□□□ 1.66
PTBP1-218ENST00000592804 CFAP44Q96MT7 982 aa25.44■■□□□ 1.66
PTBP1-218ENST00000592804 FHDC1Q9C0D6 1143 aaPredicted RBP25.44■■□□□ 1.66
PTBP1-218ENST00000592804 ZNF330Q9Y3S2 320 aaPredicted RBP25.44■■□□□ 1.66
PTBP1-218ENST00000592804 ZNF853P0CG23 659 aa25.43■■□□□ 1.66
PTBP1-218ENST00000592804 CCDC27Q2M243 656 aa25.43■■□□□ 1.66
PTBP1-218ENST00000592804 USPL1Q5W0Q7 1092 aa25.43■■□□□ 1.66
PTBP1-218ENST00000592804 NBPF26B4DH59 902 aa25.42■■□□□ 1.66
PTBP1-218ENST00000592804 NBPF10Q6P3W6 841 aaKnown RBP25.42■■□□□ 1.66
PTBP1-218ENST00000592804 NBPF15Q8N660 670 aa25.42■■□□□ 1.66
PTBP1-218ENST00000592804 NARFQ9UHQ1 456 aa25.42■■□□□ 1.66
PTBP1-218ENST00000592804 ZPR1O75312 459 aa25.41■■□□□ 1.66
PTBP1-218ENST00000592804 CALD1Q05682 793 aaKnown RBP25.41■■□□□ 1.66
PTBP1-218ENST00000592804 KRT24Q2M2I5 525 aa25.41■■□□□ 1.66
PTBP1-218ENST00000592804 WWC1Q8IX03 1113 aa25.41■■□□□ 1.66
PTBP1-218ENST00000592804 NLGN1Q8N2Q7 840 aa25.41■■□□□ 1.66
PTBP1-218ENST00000592804 MBIPQ9NS73 344 aa25.41■■□□□ 1.66
PTBP1-218ENST00000592804 IFT57Q9NWB7 429 aa25.41■■□□□ 1.66
PTBP1-218ENST00000592804 A0A087WZG4 1122 aa25.4■■□□□ 1.66
PTBP1-218ENST00000592804 MMP10P09238 476 aa25.4■■□□□ 1.66
PTBP1-218ENST00000592804 FKBP8Q14318 412 aa25.4■■□□□ 1.66
PTBP1-218ENST00000592804 NCBP3Q53F19 620 aaKnown RBP25.4■■□□□ 1.66
PTBP1-218ENST00000592804 KLHL34Q8N239 644 aa25.4■■□□□ 1.66
PTBP1-218ENST00000592804 SALL2Q9Y467 1007 aaPredicted RBP25.4■■□□□ 1.66
PTBP1-218ENST00000592804 GNAI1P63096 354 aa25.39■■□□□ 1.66
PTBP1-218ENST00000592804 SYT17Q9BSW7 474 aa25.39■■□□□ 1.66
PTBP1-218ENST00000592804 BCL2L12Q9HB09 334 aa25.39■■□□□ 1.66
PTBP1-218ENST00000592804 KIAA1551Q9HCM1 1747 aa25.39■■□□□ 1.65
PTBP1-218ENST00000592804 NRXN2Q9P2S2 1712 aa25.39■■□□□ 1.65
PTBP1-218ENST00000592804 N4BP2Q86UW6 1770 aaPredicted RBP25.39■■□□□ 1.65
PTBP1-218ENST00000592804 MIER1Q8N108 512 aa25.38■■□□□ 1.65
PTBP1-218ENST00000592804 TBC1D2BQ9UPU7 963 aa25.38■■□□□ 1.65
PTBP1-218ENST00000592804 EIF2S2P20042 333 aaKnown RBP25.35■■□□□ 1.65
PTBP1-218ENST00000592804 NPM2Q86SE8 214 aaKnown RBP25.35■■□□□ 1.65
PTBP1-218ENST00000592804 DZIP3Q86Y13 1208 aaKnown RBP25.34■■□□□ 1.65
PTBP1-218ENST00000592804 CAMTA2O94983 1202 aa25.33■■□□□ 1.65
PTBP1-218ENST00000592804 TM4SF1P30408 202 aa25.33■■□□□ 1.65
PTBP1-218ENST00000592804 BRCA1P38398 1863 aaKnown RBP25.33■■□□□ 1.65
PTBP1-218ENST00000592804 DDR1Q08345 913 aa25.33■■□□□ 1.65
PTBP1-218ENST00000592804 ANKRD36CQ5JPF3 1778 aa25.33■■□□□ 1.65
PTBP1-218ENST00000592804 ERBB4Q15303 1308 aa25.33■■□□□ 1.64
PTBP1-218ENST00000592804 MYL6BP14649 208 aa25.32■■□□□ 1.64
PTBP1-218ENST00000592804 NLGN2Q8NFZ4 835 aa25.32■■□□□ 1.64
PTBP1-218ENST00000592804 NECTIN2Q92692 538 aa25.32■■□□□ 1.64
PTBP1-218ENST00000592804 PARP3Q9Y6F1 533 aa25.32■■□□□ 1.64
PTBP1-218ENST00000592804 CACNA1FO60840 1977 aa25.32■■□□□ 1.64
PTBP1-218ENST00000592804 ANKRD31Q8N7Z5 1873 aa25.32■■□□□ 1.64
PTBP1-218ENST00000592804 NFIXQ14938 502 aa25.31■■□□□ 1.64
PTBP1-218ENST00000592804 NGEFQ8N5V2 710 aa25.31■■□□□ 1.64
PTBP1-218ENST00000592804 TSR2Q969E8 191 aaKnown RBP25.31■■□□□ 1.64
PTBP1-218ENST00000592804 IL16Q14005 1332 aa25.31■■□□□ 1.64
PTBP1-218ENST00000592804 POLRMTO00411 1230 aaKnown RBP25.3■■□□□ 1.64
PTBP1-218ENST00000592804 PDIA6Q15084 440 aa25.3■■□□□ 1.64
PTBP1-218ENST00000592804 DUSP27Q5VZP5 1158 aa25.3■■□□□ 1.64
PTBP1-218ENST00000592804 C10orf71Q711Q0 1435 aa25.29■■□□□ 1.64
PTBP1-218ENST00000592804 ANXA1P04083 346 aa25.29■■□□□ 1.64
PTBP1-218ENST00000592804 HOXB7P09629 217 aa25.29■■□□□ 1.64
PTBP1-218ENST00000592804 PROSER3Q2NL68 480 aa25.29■■□□□ 1.64
PTBP1-218ENST00000592804 WDR63Q8IWG1 891 aa25.29■■□□□ 1.64
PTBP1-218ENST00000592804 CD2APQ9Y5K6 639 aa25.29■■□□□ 1.64
PTBP1-218ENST00000592804 TBC1D9BQ66K14 1250 aa25.28■■□□□ 1.64
PTBP1-218ENST00000592804 BICDL1Q6ZP65 573 aa25.28■■□□□ 1.64
PTBP1-218ENST00000592804 LRP10Q7Z4F1 713 aa25.28■■□□□ 1.64
PTBP1-218ENST00000592804 DLEC1Q9Y238 1755 aa25.27■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms