RNA–Protein interactions for RNA: ENST00000592705.5

DNMT1-228, Transcript of DNA methyltransferase 1, humanhuman

TSL 1 (best)

Gene DNMT1, Length 5,215 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT1-228ENST00000592705 ABCC2Q92887 1545 aa14.96□□□□□ -0.01
DNMT1-228ENST00000592705 NF2P35240 595 aa14.96□□□□□ -0.01
DNMT1-228ENST00000592705 RRP12Q5JTH9 1297 aaKnown RBP14.96□□□□□ -0.01
DNMT1-228ENST00000592705 JDP2Q8WYK2 163 aa14.96□□□□□ -0.01
DNMT1-228ENST00000592705 TESK2Q96S53 571 aa14.96□□□□□ -0.01
DNMT1-228ENST00000592705 SHANK2Q9UPX8 1470 aa14.96□□□□□ -0.02
DNMT1-228ENST00000592705 LARP1Q6PKG0 1096 aaKnown RBP14.96□□□□□ -0.02
DNMT1-228ENST00000592705 MPNDQ8N594 471 aa14.96□□□□□ -0.02
DNMT1-228ENST00000592705 SMARCE1Q969G3 411 aa14.96□□□□□ -0.02
DNMT1-228ENST00000592705 PIP4K2AP48426 406 aaPredicted RBP14.95□□□□□ -0.02
DNMT1-228ENST00000592705 TAF7Q15545 349 aaPredicted RBP14.95□□□□□ -0.02
DNMT1-228ENST00000592705 CEP57L1Q8IYX8 460 aa14.95□□□□□ -0.02
DNMT1-228ENST00000592705 ERCC4Q92889 916 aaPredicted RBP14.95□□□□□ -0.02
DNMT1-228ENST00000592705 UPF3BQ9BZI7 483 aaKnown RBP14.95□□□□□ -0.02
DNMT1-228ENST00000592705 CTNNA3Q9UI47 895 aa14.95□□□□□ -0.02
DNMT1-228ENST00000592705 ATP6V1AP38606 617 aa14.95□□□□□ -0.02
DNMT1-228ENST00000592705 PDE4CQ08493 712 aa14.95□□□□□ -0.02
DNMT1-228ENST00000592705 TTC22Q5TAA0 569 aa14.95□□□□□ -0.02
DNMT1-228ENST00000592705 DACH1Q9UI36 760 aa14.95□□□□□ -0.02
DNMT1-228ENST00000592705 SERPINC1P01008 464 aa14.95□□□□□ -0.02
DNMT1-228ENST00000592705 IL2RBP14784 551 aa14.95□□□□□ -0.02
DNMT1-228ENST00000592705 MBIPQ9NS73 344 aa14.95□□□□□ -0.02
DNMT1-228ENST00000592705 CCDC66A2RUB6 948 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 METTL24Q5JXM2 366 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 RUFY1Q96T51 708 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 ABCF2Q9UG63 623 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 TTC21AQ8NDW8 1320 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 CBFA2T2O43439 604 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 KLHL40Q2TBA0 621 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 RTCBQ9Y3I0 505 aaKnown RBP14.94□□□□□ -0.02
DNMT1-228ENST00000592705 BAG4O95429 457 aaKnown RBP14.94□□□□□ -0.02
DNMT1-228ENST00000592705 CCDC83Q8IWF9 413 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 CABLES1Q8TDN4 633 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 CDC5LQ99459 802 aaKnown RBP14.94□□□□□ -0.02
DNMT1-228ENST00000592705 ZNF287Q9HBT7 754 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 SLAIN2Q9P270 581 aa14.94□□□□□ -0.02
DNMT1-228ENST00000592705 ZNF772Q68DY9 489 aaPredicted RBP14.93□□□□□ -0.02
DNMT1-228ENST00000592705 SETDB2Q96T68 719 aa14.93□□□□□ -0.02
DNMT1-228ENST00000592705 TTC21BQ7Z4L5 1316 aa14.93□□□□□ -0.02
DNMT1-228ENST00000592705 PRPF40BQ6NWY9 871 aaKnown RBP14.93□□□□□ -0.02
DNMT1-228ENST00000592705 BTG4Q9NY30 223 aa14.93□□□□□ -0.02
DNMT1-228ENST00000592705 CDKL5O76039 1030 aa14.93□□□□□ -0.02
DNMT1-228ENST00000592705 KDM4AO75164 1064 aa14.93□□□□□ -0.02
DNMT1-228ENST00000592705 TRIM22Q8IYM9 498 aa14.93□□□□□ -0.02
DNMT1-228ENST00000592705 SCAND2PQ9GZW5 306 aaPredicted RBP14.93□□□□□ -0.02
DNMT1-228ENST00000592705 LIMCH1Q9UPQ0 1083 aa14.93□□□□□ -0.02
DNMT1-228ENST00000592705 DNMT1P26358 1616 aaKnown RBP14.93□□□□□ -0.02
DNMT1-228ENST00000592705 KIAA0556O60303 1618 aa14.92□□□□□ -0.02
DNMT1-228ENST00000592705 LMOD1P29536 600 aaPredicted RBP14.92□□□□□ -0.02
DNMT1-228ENST00000592705 NOM1Q5C9Z4 860 aaKnown RBP14.92□□□□□ -0.02
DNMT1-228ENST00000592705 F6X3S4 739 aa14.92□□□□□ -0.02
DNMT1-228ENST00000592705 SYCP2Q9BX26 1530 aa14.92□□□□□ -0.02
DNMT1-228ENST00000592705 SNX21Q969T3 373 aa14.92□□□□□ -0.02
DNMT1-228ENST00000592705 PZPP20742 1482 aa14.92□□□□□ -0.02
DNMT1-228ENST00000592705 ATP2B1P20020 1258 aa14.92□□□□□ -0.02
DNMT1-228ENST00000592705 TXLNAP40222 546 aa14.91□□□□□ -0.02
DNMT1-228ENST00000592705 CWC15Q9P013 229 aaKnown RBP14.91□□□□□ -0.02
DNMT1-228ENST00000592705 HDAC9Q9UKV0 1011 aa14.91□□□□□ -0.02
DNMT1-228ENST00000592705 LRRFIP2Q9Y608 721 aaKnown RBP14.91□□□□□ -0.02
DNMT1-228ENST00000592705 PER1O15534 1290 aaPredicted RBP14.91□□□□□ -0.02
DNMT1-228ENST00000592705 MYCNP04198 464 aaPredicted RBP14.91□□□□□ -0.02
DNMT1-228ENST00000592705 MCM5P33992 734 aa14.91□□□□□ -0.02
DNMT1-228ENST00000592705 IFIT5Q13325 482 aaKnown RBP14.91□□□□□ -0.02
DNMT1-228ENST00000592705 OGFOD1Q8N543 542 aa14.91□□□□□ -0.02
DNMT1-228ENST00000592705 NAP1L1P55209 391 aaKnown RBP14.91□□□□□ -0.02
DNMT1-228ENST00000592705 DZIP1Q86YF9 867 aaKnown RBP14.91□□□□□ -0.02
DNMT1-228ENST00000592705 GPR162Q16538 588 aa14.9□□□□□ -0.02
DNMT1-228ENST00000592705 COL17A1Q9UMD9 1497 aaPredicted RBP14.9□□□□□ -0.02
DNMT1-228ENST00000592705 ATP10AO60312 1499 aa14.9□□□□□ -0.02
DNMT1-228ENST00000592705 GPTP24298 496 aa14.9□□□□□ -0.02
DNMT1-228ENST00000592705 FLIIQ13045 1269 aa14.9□□□□□ -0.02
DNMT1-228ENST00000592705 PUS7Q96PZ0 661 aaKnown RBP14.9□□□□□ -0.02
DNMT1-228ENST00000592705 SMTNL1A8MU46 457 aa14.9□□□□□ -0.02
DNMT1-228ENST00000592705 AKAP2Q9Y2D5 859 aa14.9□□□□□ -0.02
DNMT1-228ENST00000592705 FKBP4Q02790 459 aaKnown RBP eCLIP14.9□□□□□ -0.02
DNMT1-228ENST00000592705 CAGE1Q8TC20 777 aa14.9□□□□□ -0.02
DNMT1-228ENST00000592705 CCDC69A6NI79 296 aa14.89□□□□□ -0.03
DNMT1-228ENST00000592705 DNAAF4Q8WXU2 420 aa14.89□□□□□ -0.03
DNMT1-228ENST00000592705 APBA3O96018 575 aa14.89□□□□□ -0.03
DNMT1-228ENST00000592705 CDR1P51861 262 aa14.89□□□□□ -0.03
DNMT1-228ENST00000592705 MAGEC2Q9UBF1 373 aaPredicted RBP14.89□□□□□ -0.03
DNMT1-228ENST00000592705 ADAMTS12P58397 1594 aa14.89□□□□□ -0.03
DNMT1-228ENST00000592705 INSRP06213 1382 aa14.89□□□□□ -0.03
DNMT1-228ENST00000592705 FERMT3Q86UX7 667 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 PPFIBP1Q86W92 1011 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 RNF123Q5XPI4 1314 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 ANKRD18BA2A2Z9 1011 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 USP5P45974 858 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 SOGA3Q5TF21 947 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 KIF21AQ7Z4S6 1674 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 RXRBP28702 533 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 CAMK4Q16566 473 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 WWC3Q9ULE0 1092 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 TDO2P48775 406 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 ZBTB3Q9H5J0 574 aa14.88□□□□□ -0.03
DNMT1-228ENST00000592705 POLR3DP05423 398 aaPredicted RBP14.87□□□□□ -0.03
DNMT1-228ENST00000592705 U3KPZ7 1027 aaPredicted RBP14.87□□□□□ -0.03
DNMT1-228ENST00000592705 KIF2AO00139 706 aaPredicted RBP14.87□□□□□ -0.03
DNMT1-228ENST00000592705 IMMTQ16891 758 aaKnown RBP14.87□□□□□ -0.03
DNMT1-228ENST00000592705 NLRP3Q96P20 1036 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms