RNA–Protein interactions for RNA: ENST00000592388.1

VAT1-209, Transcript of vesicle amine transport 1, humanhuman

TSL 5

Gene VAT1, Length 478 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAT1-209ENST00000592388 CAPNS2Q96L46 248 aa10.39□□□□□ -0.75
VAT1-209ENST00000592388 GPR101Q96P66 508 aaPredicted RBP10.39□□□□□ -0.75
VAT1-209ENST00000592388 TESK2Q96S53 571 aa10.39□□□□□ -0.75
VAT1-209ENST00000592388 CNTNAP4Q9C0A0 1308 aa10.38□□□□□ -0.75
VAT1-209ENST00000592388 ST20-MTHFSA0A0A6YYL1 179 aa10.38□□□□□ -0.75
VAT1-209ENST00000592388 IQCA1LA6NCM1 817 aa10.38□□□□□ -0.75
VAT1-209ENST00000592388 MAP1SQ66K74 1059 aaPredicted RBP10.38□□□□□ -0.75
VAT1-209ENST00000592388 CYP4F22Q6NT55 531 aa10.38□□□□□ -0.75
VAT1-209ENST00000592388 SMG6Q86US8 1419 aaKnown RBP10.38□□□□□ -0.75
VAT1-209ENST00000592388 CASP8AP2Q9UKL3 1982 aa10.37□□□□□ -0.75
VAT1-209ENST00000592388 USP42Q9H9J4 1324 aaKnown RBP10.37□□□□□ -0.75
VAT1-209ENST00000592388 TM4SF1P30408 202 aa10.37□□□□□ -0.75
VAT1-209ENST00000592388 HSP90AB2PQ58FF8 381 aa10.37□□□□□ -0.75
VAT1-209ENST00000592388 C2CD5Q86YS7 1000 aa10.37□□□□□ -0.75
VAT1-209ENST00000592388 CNTROBQ8N137 903 aa10.37□□□□□ -0.75
VAT1-209ENST00000592388 KDRP35968 1356 aa10.37□□□□□ -0.75
VAT1-209ENST00000592388 ANKRD26Q9UPS8 1709 aa10.36□□□□□ -0.75
VAT1-209ENST00000592388 C21orf2O43822 256 aa10.36□□□□□ -0.75
VAT1-209ENST00000592388 ECE1P42892 770 aa10.36□□□□□ -0.75
VAT1-209ENST00000592388 TERF2IPQ9NYB0 399 aa10.36□□□□□ -0.75
VAT1-209ENST00000592388 H0YIN7 160 aa10.35□□□□□ -0.75
VAT1-209ENST00000592388 AOC2O75106 756 aa10.35□□□□□ -0.75
VAT1-209ENST00000592388 TRIM26Q12899 539 aaPredicted RBP10.35□□□□□ -0.75
VAT1-209ENST00000592388 SPG7Q9UQ90 795 aa10.35□□□□□ -0.75
VAT1-209ENST00000592388 RTL1A6NKG5 1358 aa10.35□□□□□ -0.75
VAT1-209ENST00000592388 MYH14Q7Z406 1995 aaKnown RBP10.34□□□□□ -0.75
VAT1-209ENST00000592388 FMR1Q06787 632 aaKnown RBP eCLIP10.34□□□□□ -0.75
VAT1-209ENST00000592388 ZNF622Q969S3 477 aaKnown RBP eCLIP10.34□□□□□ -0.75
VAT1-209ENST00000592388 L3MBTL3Q96JM7 780 aaPredicted RBP10.34□□□□□ -0.75
VAT1-209ENST00000592388 TAOK3Q9H2K8 898 aa10.34□□□□□ -0.75
VAT1-209ENST00000592388 ZPR1O75312 459 aa10.33□□□□□ -0.76
VAT1-209ENST00000592388 EPHX2P34913 555 aa10.33□□□□□ -0.76
VAT1-209ENST00000592388 CRKLP46109 303 aaKnown RBP10.33□□□□□ -0.76
VAT1-209ENST00000592388 USPL1Q5W0Q7 1092 aa10.33□□□□□ -0.76
VAT1-209ENST00000592388 IFNL2Q8IZJ0 200 aa10.33□□□□□ -0.76
VAT1-209ENST00000592388 DDX21Q9NR30 783 aaKnown RBP eCLIP10.33□□□□□ -0.76
VAT1-209ENST00000592388 HACL1Q9UJ83 578 aa10.33□□□□□ -0.76
VAT1-209ENST00000592388 DICER1Q9UPY3 1922 aaKnown RBP10.33□□□□□ -0.76
VAT1-209ENST00000592388 SERPINB2P05120 415 aa10.32□□□□□ -0.76
VAT1-209ENST00000592388 PHKG2P15735 406 aa10.32□□□□□ -0.76
VAT1-209ENST00000592388 NFIXQ14938 502 aa10.32□□□□□ -0.76
VAT1-209ENST00000592388 PUS7Q96PZ0 661 aaKnown RBP10.32□□□□□ -0.76
VAT1-209ENST00000592388 LTBP1Q14766 1721 aa10.32□□□□□ -0.76
VAT1-209ENST00000592388 INSRP06213 1382 aa10.31□□□□□ -0.76
VAT1-209ENST00000592388 CARMIL3Q8ND23 1372 aa10.31□□□□□ -0.76
VAT1-209ENST00000592388 COL5A3P25940 1745 aaPredicted RBP10.31□□□□□ -0.76
VAT1-209ENST00000592388 CA12O43570 354 aa10.31□□□□□ -0.76
VAT1-209ENST00000592388 PTCD1O75127 700 aaKnown RBP10.31□□□□□ -0.76
VAT1-209ENST00000592388 MAP2K2P36507 400 aa10.31□□□□□ -0.76
VAT1-209ENST00000592388 HABP4Q5JVS0 413 aaKnown RBP10.31□□□□□ -0.76
VAT1-209ENST00000592388 GCC1Q96CN9 775 aa10.31□□□□□ -0.76
VAT1-209ENST00000592388 THSD7BQ9C0I4 1608 aa10.31□□□□□ -0.76
VAT1-209ENST00000592388 SCN4AP35499 1836 aa10.3□□□□□ -0.76
VAT1-209ENST00000592388 PNMA8AQ86V59 439 aaPredicted RBP10.3□□□□□ -0.76
VAT1-209ENST00000592388 GGNBP2Q9H3C7 697 aa10.3□□□□□ -0.76
VAT1-209ENST00000592388 RNF123Q5XPI4 1314 aa10.3□□□□□ -0.76
VAT1-209ENST00000592388 ZNF541Q9H0D2 1346 aa10.3□□□□□ -0.76
VAT1-209ENST00000592388 DLEC1Q9Y238 1755 aa10.29□□□□□ -0.76
VAT1-209ENST00000592388 AFDNP55196 1824 aaKnown RBP10.29□□□□□ -0.76
VAT1-209ENST00000592388 FER1L6Q2WGJ9 1857 aa10.29□□□□□ -0.76
VAT1-209ENST00000592388 LTBP3Q9NS15 1303 aa10.29□□□□□ -0.76
VAT1-209ENST00000592388 CST9Q5W186 159 aa10.28□□□□□ -0.76
VAT1-209ENST00000592388 CIAPIN1Q6FI81 312 aa10.28□□□□□ -0.76
VAT1-209ENST00000592388 INTS5Q6P9B9 1019 aaKnown RBP10.28□□□□□ -0.76
VAT1-209ENST00000592388 CCDC24Q8N4L8 307 aa10.28□□□□□ -0.76
VAT1-209ENST00000592388 NBPF15Q8N660 670 aa10.28□□□□□ -0.76
VAT1-209ENST00000592388 TLL2Q9Y6L7 1015 aa10.28□□□□□ -0.76
VAT1-209ENST00000592388 ADAMTSL1Q8N6G6 1762 aa10.28□□□□□ -0.76
VAT1-209ENST00000592388 FLT4P35916 1363 aa10.27□□□□□ -0.76
VAT1-209ENST00000592388 ERVV-2B6SEH9 535 aa10.27□□□□□ -0.77
VAT1-209ENST00000592388 TRAF5O00463 557 aa10.27□□□□□ -0.77
VAT1-209ENST00000592388 DLL1O00548 723 aa10.27□□□□□ -0.77
VAT1-209ENST00000592388 FYB1O15117 783 aa10.27□□□□□ -0.77
VAT1-209ENST00000592388 BRPF1P55201 1214 aaPredicted RBP10.27□□□□□ -0.77
VAT1-209ENST00000592388 BICDL1Q6ZP65 573 aa10.27□□□□□ -0.77
VAT1-209ENST00000592388 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP10.27□□□□□ -0.77
VAT1-209ENST00000592388 ZNF831Q5JPB2 1677 aa10.26□□□□□ -0.77
VAT1-209ENST00000592388 CABP4P57796 275 aa10.26□□□□□ -0.77
VAT1-209ENST00000592388 BCL2L12Q9HB09 334 aa10.26□□□□□ -0.77
VAT1-209ENST00000592388 NARFQ9UHQ1 456 aa10.26□□□□□ -0.77
VAT1-209ENST00000592388 NRXN2Q9P2S2 1712 aa10.25□□□□□ -0.77
VAT1-209ENST00000592388 CARD14Q9BXL6 1004 aa10.25□□□□□ -0.77
VAT1-209ENST00000592388 PCGF6Q9BYE7 350 aa10.25□□□□□ -0.77
VAT1-209ENST00000592388 ZNF277Q9NRM2 450 aaPredicted RBP10.25□□□□□ -0.77
VAT1-209ENST00000592388 SOS1Q07889 1333 aaPredicted RBP10.25□□□□□ -0.77
VAT1-209ENST00000592388 PPM1GO15355 546 aaPredicted RBP10.24□□□□□ -0.77
VAT1-209ENST00000592388 PDE6BP35913 854 aa10.24□□□□□ -0.77
VAT1-209ENST00000592388 PRPF40BQ6NWY9 871 aaKnown RBP10.24□□□□□ -0.77
VAT1-209ENST00000592388 SAPCD2Q86UD0 394 aa10.24□□□□□ -0.77
VAT1-209ENST00000592388 ZIC5Q96T25 663 aa10.24□□□□□ -0.77
VAT1-209ENST00000592388 EYA1Q99502 592 aa10.24□□□□□ -0.77
VAT1-209ENST00000592388 EMILIN1Q9Y6C2 1016 aa10.24□□□□□ -0.77
VAT1-209ENST00000592388 ADAMTS7Q9UKP4 1686 aa10.23□□□□□ -0.77
VAT1-209ENST00000592388 FXR1P51114 621 aaKnown RBP eCLIP10.23□□□□□ -0.77
VAT1-209ENST00000592388 SOGA3Q5TF21 947 aa10.23□□□□□ -0.77
VAT1-209ENST00000592388 DNAJC10Q8IXB1 793 aa10.23□□□□□ -0.77
VAT1-209ENST00000592388 CNKSR1Q969H4 720 aa10.23□□□□□ -0.77
VAT1-209ENST00000592388 BRIP1Q9BX63 1249 aa10.23□□□□□ -0.77
VAT1-209ENST00000592388 PDZRN3Q9UPQ7 1066 aa10.23□□□□□ -0.77
VAT1-209ENST00000592388 NCAPD2Q15021 1401 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms