RNA–Protein interactions for RNA: ENST00000592354.5

CAPNS1-213, Transcript of calpain small subunit 1, humanhuman

TSL 2

Gene CAPNS1, Length 690 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-213ENST00000592354 GAS2L2Q8NHY3 880 aa18.13■□□□□ 0.49
CAPNS1-213ENST00000592354 DLEC1Q9Y238 1755 aa18.12■□□□□ 0.49
CAPNS1-213ENST00000592354 ZPR1O75312 459 aa18.12■□□□□ 0.49
CAPNS1-213ENST00000592354 TEFQ10587 303 aa18.12■□□□□ 0.49
CAPNS1-213ENST00000592354 IL17REQ8NFR9 667 aa18.12■□□□□ 0.49
CAPNS1-213ENST00000592354 GPBP1L1Q9HC44 474 aaPredicted RBP18.12■□□□□ 0.49
CAPNS1-213ENST00000592354 PPP2R1AP30153 589 aa18.11■□□□□ 0.49
CAPNS1-213ENST00000592354 RSPH6AQ9H0K4 717 aa18.11■□□□□ 0.49
CAPNS1-213ENST00000592354 POLRMTO00411 1230 aaKnown RBP18.1■□□□□ 0.49
CAPNS1-213ENST00000592354 FCHSD2O94868 740 aa18.1■□□□□ 0.49
CAPNS1-213ENST00000592354 VSIG10Q8N0Z9 540 aa18.1■□□□□ 0.49
CAPNS1-213ENST00000592354 PHACTR3Q96KR7 559 aa18.1■□□□□ 0.49
CAPNS1-213ENST00000592354 CEMIPQ8WUJ3 1361 aa18.09■□□□□ 0.49
CAPNS1-213ENST00000592354 HEG1Q9ULI3 1381 aa18.09■□□□□ 0.49
CAPNS1-213ENST00000592354 CANXP27824 592 aaKnown RBP18.09■□□□□ 0.49
CAPNS1-213ENST00000592354 ZNF496Q96IT1 587 aaPredicted RBP18.09■□□□□ 0.49
CAPNS1-213ENST00000592354 BCORQ6W2J9 1755 aa18.09■□□□□ 0.49
CAPNS1-213ENST00000592354 U2AF1L5P0DN76 240 aaPredicted RBP18.08■□□□□ 0.48
CAPNS1-213ENST00000592354 KCNA3P22001 575 aa18.08■□□□□ 0.48
CAPNS1-213ENST00000592354 CHRNA5P30532 468 aa18.08■□□□□ 0.48
CAPNS1-213ENST00000592354 U2AF1Q01081 240 aaKnown RBP eCLIP18.08■□□□□ 0.48
CAPNS1-213ENST00000592354 ZNF790Q6PG37 636 aa18.08■□□□□ 0.48
CAPNS1-213ENST00000592354 NARFQ9UHQ1 456 aa18.08■□□□□ 0.48
CAPNS1-213ENST00000592354 TM4SF1P30408 202 aa18.07■□□□□ 0.48
CAPNS1-213ENST00000592354 ARHGAP27Q6ZUM4 889 aa18.07■□□□□ 0.48
CAPNS1-213ENST00000592354 NUDCQ9Y266 331 aa18.07■□□□□ 0.48
CAPNS1-213ENST00000592354 DLG5Q8TDM6 1919 aa18.07■□□□□ 0.48
CAPNS1-213ENST00000592354 ANKRD31Q8N7Z5 1873 aa18.06■□□□□ 0.48
CAPNS1-213ENST00000592354 STARD3NLO95772 234 aa18.06■□□□□ 0.48
CAPNS1-213ENST00000592354 NFIXQ14938 502 aa18.06■□□□□ 0.48
CAPNS1-213ENST00000592354 BCL2L12Q9HB09 334 aa18.06■□□□□ 0.48
CAPNS1-213ENST00000592354 ZNF330Q9Y3S2 320 aaPredicted RBP18.06■□□□□ 0.48
CAPNS1-213ENST00000592354 COL11A2P13942 1736 aaPredicted RBP18.06■□□□□ 0.48
CAPNS1-213ENST00000592354 CARMIL3Q8ND23 1372 aa18.05■□□□□ 0.48
CAPNS1-213ENST00000592354 PIM2Q9P1W9 311 aa18.05■□□□□ 0.48
CAPNS1-213ENST00000592354 KCNQ3O43525 872 aa18.04■□□□□ 0.48
CAPNS1-213ENST00000592354 LAMB4A4D0S4 1761 aa18.04■□□□□ 0.48
CAPNS1-213ENST00000592354 BTBD11A6QL63 1104 aa18.03■□□□□ 0.48
CAPNS1-213ENST00000592354 EIF5P55010 431 aaKnown RBP18.03■□□□□ 0.48
CAPNS1-213ENST00000592354 DALRD3Q5D0E6 543 aaKnown RBP18.03■□□□□ 0.48
CAPNS1-213ENST00000592354 BICDL1Q6ZP65 573 aa18.03■□□□□ 0.48
CAPNS1-213ENST00000592354 MCM10Q7L590 875 aa18.03■□□□□ 0.48
CAPNS1-213ENST00000592354 FMNL2Q96PY5 1086 aa18.03■□□□□ 0.48
CAPNS1-213ENST00000592354 CACNA1SQ13698 1873 aa18.03■□□□□ 0.48
CAPNS1-213ENST00000592354 SBF1O95248 1867 aa18.02■□□□□ 0.48
CAPNS1-213ENST00000592354 KDM3BQ7LBC6 1761 aa18.02■□□□□ 0.47
CAPNS1-213ENST00000592354 TIAM2Q8IVF5 1701 aa18.01■□□□□ 0.47
CAPNS1-213ENST00000592354 A1BGP04217 495 aa18.01■□□□□ 0.47
CAPNS1-213ENST00000592354 SERPINB2P05120 415 aa18.01■□□□□ 0.47
CAPNS1-213ENST00000592354 DCTN1Q14203 1278 aa18.01■□□□□ 0.47
CAPNS1-213ENST00000592354 RTF1Q92541 710 aaKnown RBP18.01■□□□□ 0.47
CAPNS1-213ENST00000592354 PIP4K2AP48426 406 aaPredicted RBP18■□□□□ 0.47
CAPNS1-213ENST00000592354 TBC1D2BQ9UPU7 963 aa18■□□□□ 0.47
CAPNS1-213ENST00000592354 A0A087WZG4 1122 aa17.99■□□□□ 0.47
CAPNS1-213ENST00000592354 PRAMEF22A3QJZ6 481 aa17.99■□□□□ 0.47
CAPNS1-213ENST00000592354 KIF3CO14782 793 aa17.99■□□□□ 0.47
CAPNS1-213ENST00000592354 C9orf131Q5VYM1 1079 aa17.99■□□□□ 0.47
CAPNS1-213ENST00000592354 TBC1D9BQ66K14 1250 aa17.99■□□□□ 0.47
CAPNS1-213ENST00000592354 TEX13AQ9BXU3 409 aaPredicted RBP17.99■□□□□ 0.47
CAPNS1-213ENST00000592354 IL6STP40189 918 aaPredicted RBP17.98■□□□□ 0.47
CAPNS1-213ENST00000592354 TNRC6CQ9HCJ0 1690 aaKnown RBP17.97■□□□□ 0.47
CAPNS1-213ENST00000592354 CCDC24Q8N4L8 307 aa17.97■□□□□ 0.47
CAPNS1-213ENST00000592354 RNF181Q9P0P0 153 aa17.97■□□□□ 0.47
CAPNS1-213ENST00000592354 CCDC88AQ3V6T2 1871 aa17.97■□□□□ 0.47
CAPNS1-213ENST00000592354 RASSF7Q02833 373 aa17.96■□□□□ 0.47
CAPNS1-213ENST00000592354 C2CD5Q86YS7 1000 aa17.96■□□□□ 0.47
CAPNS1-213ENST00000592354 NMRK2Q9NPI5 230 aa17.96■□□□□ 0.47
CAPNS1-213ENST00000592354 USP16Q9Y5T5 823 aa17.96■□□□□ 0.47
CAPNS1-213ENST00000592354 ARFGEF2Q9Y6D5 1785 aa17.95■□□□□ 0.46
CAPNS1-213ENST00000592354 CAMTA2O94983 1202 aa17.95■□□□□ 0.46
CAPNS1-213ENST00000592354 NPM2Q86SE8 214 aaKnown RBP17.95■□□□□ 0.46
CAPNS1-213ENST00000592354 DZIP3Q86Y13 1208 aaKnown RBP17.95■□□□□ 0.46
CAPNS1-213ENST00000592354 SNRPA1P09661 255 aaKnown RBP17.93■□□□□ 0.46
CAPNS1-213ENST00000592354 HSPA6P17066 643 aa17.93■□□□□ 0.46
CAPNS1-213ENST00000592354 PRR5LQ6MZQ0 368 aa17.93■□□□□ 0.46
CAPNS1-213ENST00000592354 H0YIN7 160 aa17.92■□□□□ 0.46
CAPNS1-213ENST00000592354 NPHP1O15259 732 aa17.92■□□□□ 0.46
CAPNS1-213ENST00000592354 HTATSF1O43719 755 aaKnown RBP17.92■□□□□ 0.46
CAPNS1-213ENST00000592354 NEFMP07197 916 aa17.92■□□□□ 0.46
CAPNS1-213ENST00000592354 TTLL6Q8N841 843 aa17.92■□□□□ 0.46
CAPNS1-213ENST00000592354 MIS18AQ9NYP9 233 aa17.92■□□□□ 0.46
CAPNS1-213ENST00000592354 CNBD1Q8NA66 436 aa17.91■□□□□ 0.46
CAPNS1-213ENST00000592354 FER1L6Q2WGJ9 1857 aa17.9■□□□□ 0.46
CAPNS1-213ENST00000592354 CEP350Q5VT06 3117 aa17.9■□□□□ 0.46
CAPNS1-213ENST00000592354 ZNF622Q969S3 477 aaKnown RBP eCLIP17.9■□□□□ 0.46
CAPNS1-213ENST00000592354 PLEKHF1Q96S99 279 aa17.9■□□□□ 0.46
CAPNS1-213ENST00000592354 SETDB2Q96T68 719 aa17.9■□□□□ 0.46
CAPNS1-213ENST00000592354 THUMPD2Q9BTF0 503 aaKnown RBP17.9■□□□□ 0.46
CAPNS1-213ENST00000592354 SLX4Q8IY92 1834 aa17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 NBPF26B4DH59 902 aa17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 PRELPP51888 382 aa17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 TAF7Q15545 349 aaPredicted RBP17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 NBPF10Q6P3W6 841 aaKnown RBP17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 NBPF15Q8N660 670 aa17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 BRIP1Q9BX63 1249 aa17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 ZNF219Q9P2Y4 722 aaPredicted RBP17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 MAPK8IP3Q9UPT6 1336 aa17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 WDR90Q96KV7 1748 aa17.89■□□□□ 0.45
CAPNS1-213ENST00000592354 PDE6BP35913 854 aa17.88■□□□□ 0.45
CAPNS1-213ENST00000592354 ST5P78524 1137 aa17.88■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms