RNA–Protein interactions for RNA: ENST00000592299.5

SPHK1-210, Transcript of sphingosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SPHK1, Length 1,821 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPHK1-210ENST00000592299 ATG3Q9NT62 314 aa28.94■■■□□ 2.22
SPHK1-210ENST00000592299 USP16Q9Y5T5 823 aa28.94■■■□□ 2.22
SPHK1-210ENST00000592299 KCPQ6ZWJ8 1503 aa28.93■■■□□ 2.22
SPHK1-210ENST00000592299 ANXA1P04083 346 aa28.93■■■□□ 2.22
SPHK1-210ENST00000592299 FKBP5Q13451 457 aaPredicted RBP28.93■■■□□ 2.22
SPHK1-210ENST00000592299 ABCC4O15439 1325 aa28.93■■■□□ 2.22
SPHK1-210ENST00000592299 ONECUT3O60422 494 aaPredicted RBP28.92■■■□□ 2.22
SPHK1-210ENST00000592299 PHAXQ9H814 394 aaKnown RBP28.92■■■□□ 2.22
SPHK1-210ENST00000592299 ZNF772Q68DY9 489 aaPredicted RBP28.92■■■□□ 2.22
SPHK1-210ENST00000592299 SEPT12Q8IYM1 358 aa28.92■■■□□ 2.22
SPHK1-210ENST00000592299 DDX19BQ9UMR2 479 aa28.91■■■□□ 2.22
SPHK1-210ENST00000592299 RBM42Q9BTD8 480 aaKnown RBP28.9■■■□□ 2.22
SPHK1-210ENST00000592299 RGS12O14924 1447 aa28.89■■■□□ 2.22
SPHK1-210ENST00000592299 PROSER3Q2NL68 480 aa28.89■■■□□ 2.22
SPHK1-210ENST00000592299 F6X3S4 739 aa28.88■■■□□ 2.21
SPHK1-210ENST00000592299 DDX21Q9NR30 783 aaKnown RBP eCLIP28.88■■■□□ 2.21
SPHK1-210ENST00000592299 FAM182BQ5T319 152 aa28.87■■■□□ 2.21
SPHK1-210ENST00000592299 SLC4A10Q6U841 1118 aa28.87■■■□□ 2.21
SPHK1-210ENST00000592299 HYPKQ9NX55 129 aa28.87■■■□□ 2.21
SPHK1-210ENST00000592299 KCNQ2O43526 872 aa28.86■■■□□ 2.21
SPHK1-210ENST00000592299 LAMB4A4D0S4 1761 aa28.86■■■□□ 2.21
SPHK1-210ENST00000592299 MYL6BP14649 208 aa28.85■■■□□ 2.21
SPHK1-210ENST00000592299 PDIA6Q15084 440 aa28.85■■■□□ 2.21
SPHK1-210ENST00000592299 AAMPQ13685 434 aa28.85■■■□□ 2.21
SPHK1-210ENST00000592299 INTS3Q68E01 1043 aaKnown RBP28.83■■■□□ 2.21
SPHK1-210ENST00000592299 VSIG10Q8N0Z9 540 aa28.83■■■□□ 2.21
SPHK1-210ENST00000592299 PIP4K2AP48426 406 aaPredicted RBP28.83■■■□□ 2.21
SPHK1-210ENST00000592299 RBM6P78332 1123 aaKnown RBP28.82■■■□□ 2.2
SPHK1-210ENST00000592299 TEX13AQ9BXU3 409 aaPredicted RBP28.81■■■□□ 2.2
SPHK1-210ENST00000592299 AIMP1Q12904 312 aaKnown RBP28.8■■■□□ 2.2
SPHK1-210ENST00000592299 DNAJC10Q8IXB1 793 aa28.8■■■□□ 2.2
SPHK1-210ENST00000592299 CHMP4BQ9H444 224 aaKnown RBP28.8■■■□□ 2.2
SPHK1-210ENST00000592299 PI4KAP2A4QPH2 592 aa28.79■■■□□ 2.2
SPHK1-210ENST00000592299 PI4KAP1Q8N8J0 262 aa28.79■■■□□ 2.2
SPHK1-210ENST00000592299 ZBTB7BO15156 539 aaPredicted RBP28.78■■■□□ 2.2
SPHK1-210ENST00000592299 A1BGP04217 495 aa28.78■■■□□ 2.2
SPHK1-210ENST00000592299 CCT4P50991 539 aaKnown RBP28.78■■■□□ 2.2
SPHK1-210ENST00000592299 ZBTB40Q9NUA8 1239 aa28.78■■■□□ 2.2
SPHK1-210ENST00000592299 ERBB4Q15303 1308 aa28.78■■■□□ 2.2
SPHK1-210ENST00000592299 SLC4A9Q96Q91 983 aa28.78■■■□□ 2.2
SPHK1-210ENST00000592299 STARD3NLO95772 234 aa28.77■■■□□ 2.2
SPHK1-210ENST00000592299 DDX58O95786 925 aaKnown RBP28.77■■■□□ 2.2
SPHK1-210ENST00000592299 XAGE3Q8WTP9 111 aa28.76■■■□□ 2.19
SPHK1-210ENST00000592299 SMARCC1Q92922 1105 aaPredicted RBP28.76■■■□□ 2.19
SPHK1-210ENST00000592299 PALLDQ8WX93 1383 aa28.76■■■□□ 2.19
SPHK1-210ENST00000592299 COPS6Q7L5N1 327 aa28.76■■■□□ 2.19
SPHK1-210ENST00000592299 DNAAF4Q8WXU2 420 aa28.76■■■□□ 2.19
SPHK1-210ENST00000592299 NBPF26B4DH59 902 aa28.75■■■□□ 2.19
SPHK1-210ENST00000592299 NBPF14Q5TI25 921 aa28.75■■■□□ 2.19
SPHK1-210ENST00000592299 NBPF10Q6P3W6 841 aaKnown RBP28.75■■■□□ 2.19
SPHK1-210ENST00000592299 KRT27Q7Z3Y8 459 aa28.75■■■□□ 2.19
SPHK1-210ENST00000592299 NBPF15Q8N660 670 aa28.75■■■□□ 2.19
SPHK1-210ENST00000592299 PCDHB15Q9Y5E8 787 aa28.75■■■□□ 2.19
SPHK1-210ENST00000592299 KSR2Q6VAB6 950 aa28.74■■■□□ 2.19
SPHK1-210ENST00000592299 PTF1AQ7RTS3 328 aa28.74■■■□□ 2.19
SPHK1-210ENST00000592299 LRP10Q7Z4F1 713 aa28.74■■■□□ 2.19
SPHK1-210ENST00000592299 MAP3K2Q9Y2U5 619 aa28.74■■■□□ 2.19
SPHK1-210ENST00000592299 ADCY9O60503 1353 aa28.74■■■□□ 2.19
SPHK1-210ENST00000592299 BRWD3Q6RI45 1802 aa28.73■■■□□ 2.19
SPHK1-210ENST00000592299 LOC102724428A0A0B4J2F2 783 aa28.73■■■□□ 2.19
SPHK1-210ENST00000592299 RXRBP28702 533 aa28.73■■■□□ 2.19
SPHK1-210ENST00000592299 SIK1P57059 783 aa28.73■■■□□ 2.19
SPHK1-210ENST00000592299 PXDNLA1KZ92 1463 aa28.73■■■□□ 2.19
SPHK1-210ENST00000592299 ATP6V1AP38606 617 aa28.72■■■□□ 2.19
SPHK1-210ENST00000592299 NHSQ6T4R5 1651 aa28.72■■■□□ 2.19
SPHK1-210ENST00000592299 RIC3Q7Z5B4 369 aa28.71■■■□□ 2.19
SPHK1-210ENST00000592299 CYP19A1P11511 503 aaPredicted RBP28.7■■■□□ 2.18
SPHK1-210ENST00000592299 SBF2Q86WG5 1849 aa28.69■■■□□ 2.18
SPHK1-210ENST00000592299 SRCIN1Q9C0H9 1055 aa28.69■■■□□ 2.18
SPHK1-210ENST00000592299 C1orf115Q9H7X2 142 aa28.69■■■□□ 2.18
SPHK1-210ENST00000592299 ZNF330Q9Y3S2 320 aaPredicted RBP28.69■■■□□ 2.18
SPHK1-210ENST00000592299 ANKRD13DQ6ZTN6 518 aa28.69■■■□□ 2.18
SPHK1-210ENST00000592299 MEIS3Q99687 375 aa28.69■■■□□ 2.18
SPHK1-210ENST00000592299 RGS17Q9UGC6 210 aaPredicted RBP28.69■■■□□ 2.18
SPHK1-210ENST00000592299 BTAF1O14981 1849 aa28.68■■■□□ 2.18
SPHK1-210ENST00000592299 TJP1Q07157 1748 aa28.68■■■□□ 2.18
SPHK1-210ENST00000592299 FAM196AQ6ZSG2 479 aa28.68■■■□□ 2.18
SPHK1-210ENST00000592299 BEND3Q5T5X7 828 aa28.67■■■□□ 2.18
SPHK1-210ENST00000592299 IGHDP01880 384 aa28.66■■■□□ 2.18
SPHK1-210ENST00000592299 CENPQQ7L2Z9 268 aaPredicted RBP28.66■■■□□ 2.18
SPHK1-210ENST00000592299 N4BP2Q86UW6 1770 aaPredicted RBP28.66■■■□□ 2.18
SPHK1-210ENST00000592299 KDM2BQ8NHM5 1336 aa28.65■■■□□ 2.18
SPHK1-210ENST00000592299 EP400Q96L91 3159 aa28.65■■■□□ 2.18
SPHK1-210ENST00000592299 TTLL7Q6ZT98 887 aa28.64■■■□□ 2.18
SPHK1-210ENST00000592299 RWDD1Q9H446 243 aaPredicted RBP28.64■■■□□ 2.18
SPHK1-210ENST00000592299 ITPK1Q13572 414 aa28.64■■■□□ 2.17
SPHK1-210ENST00000592299 POTEAQ6S8J7 498 aa28.64■■■□□ 2.17
SPHK1-210ENST00000592299 ZBTB1Q9Y2K1 713 aa28.64■■■□□ 2.17
SPHK1-210ENST00000592299 ATP10DQ9P241 1426 aa28.64■■■□□ 2.17
SPHK1-210ENST00000592299 NEXNQ0ZGT2 675 aa28.63■■■□□ 2.17
SPHK1-210ENST00000592299 PLBD2Q8NHP8 589 aa28.63■■■□□ 2.17
SPHK1-210ENST00000592299 BCL11BQ9C0K0 894 aaPredicted RBP28.63■■■□□ 2.17
SPHK1-210ENST00000592299 GNAI3P08754 354 aa28.62■■■□□ 2.17
SPHK1-210ENST00000592299 ARXQ96QS3 562 aa28.62■■■□□ 2.17
SPHK1-210ENST00000592299 METTL22Q9BUU2 404 aaPredicted RBP28.62■■■□□ 2.17
SPHK1-210ENST00000592299 CWF19L2Q2TBE0 894 aaKnown RBP28.61■■■□□ 2.17
SPHK1-210ENST00000592299 LINS1Q8NG48 757 aa28.61■■■□□ 2.17
SPHK1-210ENST00000592299 MYD88Q99836 296 aa28.61■■■□□ 2.17
SPHK1-210ENST00000592299 CRKLP46109 303 aaKnown RBP28.6■■■□□ 2.17
SPHK1-210ENST00000592299 NPM2Q86SE8 214 aaKnown RBP28.6■■■□□ 2.17
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms