RNA–Protein interactions for RNA: ENST00000590874.5

CAPNS1-211, Transcript of calpain small subunit 1, humanhuman

TSL 5 BASIC

Gene CAPNS1, Length 926 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPNS1-211ENST00000590874 ZBTB1Q9Y2K1 713 aa34.78■■■■□ 3.16
CAPNS1-211ENST00000590874 COL15A1P39059 1388 aa34.77■■■■□ 3.16
CAPNS1-211ENST00000590874 DIAPH1O60610 1272 aaKnown RBP34.77■■■■□ 3.16
CAPNS1-211ENST00000590874 NARFQ9UHQ1 456 aa34.75■■■■□ 3.15
CAPNS1-211ENST00000590874 NFIXQ14938 502 aa34.74■■■■□ 3.15
CAPNS1-211ENST00000590874 APLP1P51693 650 aa34.73■■■■□ 3.15
CAPNS1-211ENST00000590874 BCL2L12Q9HB09 334 aa34.73■■■■□ 3.15
CAPNS1-211ENST00000590874 VSIG10Q8N0Z9 540 aa34.72■■■■□ 3.15
CAPNS1-211ENST00000590874 RNF181Q9P0P0 153 aa34.72■■■■□ 3.15
CAPNS1-211ENST00000590874 VIRMAQ69YN4 1812 aaKnown RBP34.71■■■■□ 3.15
CAPNS1-211ENST00000590874 COL3A1P02461 1466 aaPredicted RBP34.7■■■■□ 3.15
CAPNS1-211ENST00000590874 UBR2Q8IWV8 1755 aa34.69■■■■□ 3.14
CAPNS1-211ENST00000590874 NRXN2Q9P2S2 1712 aa34.68■■■■□ 3.14
CAPNS1-211ENST00000590874 CANXP27824 592 aaKnown RBP34.67■■■■□ 3.14
CAPNS1-211ENST00000590874 RBM46Q8TBY0 533 aaKnown RBP34.66■■■■□ 3.14
CAPNS1-211ENST00000590874 AFDNP55196 1824 aaKnown RBP34.66■■■■□ 3.14
CAPNS1-211ENST00000590874 SERPINB2P05120 415 aa34.65■■■■□ 3.14
CAPNS1-211ENST00000590874 KDM2BQ8NHM5 1336 aa34.64■■■■□ 3.14
CAPNS1-211ENST00000590874 RASSF7Q02833 373 aa34.64■■■■□ 3.14
CAPNS1-211ENST00000590874 DNAJC5GQ8N7S2 189 aa34.64■■■■□ 3.14
CAPNS1-211ENST00000590874 CARMIL3Q8ND23 1372 aa34.63■■■■□ 3.13
CAPNS1-211ENST00000590874 CNGB1Q14028 1251 aaPredicted RBP34.63■■■■□ 3.13
CAPNS1-211ENST00000590874 C16orf71Q8IYS4 520 aaPredicted RBP34.63■■■■□ 3.13
CAPNS1-211ENST00000590874 TTC5Q8N0Z6 440 aa34.63■■■■□ 3.13
CAPNS1-211ENST00000590874 U2SURPO15042 1029 aaKnown RBP34.62■■■■□ 3.13
CAPNS1-211ENST00000590874 NPC1L1Q9UHC9 1359 aa34.62■■■■□ 3.13
CAPNS1-211ENST00000590874 EIF5P55010 431 aaKnown RBP34.61■■■■□ 3.13
CAPNS1-211ENST00000590874 IL17REQ8NFR9 667 aa34.61■■■■□ 3.13
CAPNS1-211ENST00000590874 ZNF496Q96IT1 587 aaPredicted RBP34.6■■■■□ 3.13
CAPNS1-211ENST00000590874 STARD3NLO95772 234 aa34.59■■■■□ 3.13
CAPNS1-211ENST00000590874 RRAGCQ9HB90 399 aa34.59■■■■□ 3.13
CAPNS1-211ENST00000590874 BICDL1Q6ZP65 573 aa34.58■■■■□ 3.13
CAPNS1-211ENST00000590874 DLEC1Q9Y238 1755 aa34.58■■■■□ 3.13
CAPNS1-211ENST00000590874 SBF1O95248 1867 aa34.58■■■■□ 3.13
CAPNS1-211ENST00000590874 HEG1Q9ULI3 1381 aa34.58■■■■□ 3.13
CAPNS1-211ENST00000590874 GNAT3A8MTJ3 354 aa34.57■■■■□ 3.12
CAPNS1-211ENST00000590874 PRELPP51888 382 aa34.57■■■■□ 3.12
CAPNS1-211ENST00000590874 TEFQ10587 303 aa34.57■■■■□ 3.12
CAPNS1-211ENST00000590874 ZNF790Q6PG37 636 aa34.57■■■■□ 3.12
CAPNS1-211ENST00000590874 C2CD5Q86YS7 1000 aa34.57■■■■□ 3.12
CAPNS1-211ENST00000590874 GAS2L2Q8NHY3 880 aa34.57■■■■□ 3.12
CAPNS1-211ENST00000590874 TTLL6Q8N841 843 aa34.56■■■■□ 3.12
CAPNS1-211ENST00000590874 WDR90Q96KV7 1748 aa34.55■■■■□ 3.12
CAPNS1-211ENST00000590874 HTRA3P83110 453 aa34.55■■■■□ 3.12
CAPNS1-211ENST00000590874 FSTL1Q12841 308 aa34.55■■■■□ 3.12
CAPNS1-211ENST00000590874 TNRC6CQ9HCJ0 1690 aaKnown RBP34.54■■■■□ 3.12
CAPNS1-211ENST00000590874 A0A087WZG4 1122 aa34.54■■■■□ 3.12
CAPNS1-211ENST00000590874 TBC1D9BQ66K14 1250 aa34.54■■■■□ 3.12
CAPNS1-211ENST00000590874 ZC3H4Q9UPT8 1303 aaKnown RBP34.53■■■■□ 3.12
CAPNS1-211ENST00000590874 SIPA1L3O60292 1781 aaPredicted RBP34.52■■■■□ 3.12
CAPNS1-211ENST00000590874 SCN7AQ01118 1682 aa34.52■■■■□ 3.12
CAPNS1-211ENST00000590874 H0YIN7 160 aa34.52■■■■□ 3.12
CAPNS1-211ENST00000590874 LMNB1P20700 586 aa34.52■■■■□ 3.12
CAPNS1-211ENST00000590874 ZNF330Q9Y3S2 320 aaPredicted RBP34.51■■■■□ 3.12
CAPNS1-211ENST00000590874 TEX13AQ9BXU3 409 aaPredicted RBP34.5■■■■□ 3.11
CAPNS1-211ENST00000590874 TBC1D2BQ9UPU7 963 aa34.5■■■■□ 3.11
CAPNS1-211ENST00000590874 CEMIPQ8WUJ3 1361 aa34.49■■■■□ 3.11
CAPNS1-211ENST00000590874 NFKBIEO00221 500 aa34.49■■■■□ 3.11
CAPNS1-211ENST00000590874 PHACTR3Q96KR7 559 aa34.48■■■■□ 3.11
CAPNS1-211ENST00000590874 FMNL2Q96PY5 1086 aa34.48■■■■□ 3.11
CAPNS1-211ENST00000590874 IL6STP40189 918 aaPredicted RBP34.47■■■■□ 3.11
CAPNS1-211ENST00000590874 CCDC24Q8N4L8 307 aa34.47■■■■□ 3.11
CAPNS1-211ENST00000590874 KCNQ3O43525 872 aa34.46■■■■□ 3.11
CAPNS1-211ENST00000590874 A1BGP04217 495 aa34.46■■■■□ 3.11
CAPNS1-211ENST00000590874 PRKAR2BP31323 418 aa34.46■■■■□ 3.11
CAPNS1-211ENST00000590874 ANKRD31Q8N7Z5 1873 aa34.46■■■■□ 3.11
CAPNS1-211ENST00000590874 GLTPD2A6NH11 291 aa34.45■■■■□ 3.11
CAPNS1-211ENST00000590874 PRR5LQ6MZQ0 368 aa34.45■■■■□ 3.11
CAPNS1-211ENST00000590874 RSPH6AQ9H0K4 717 aa34.45■■■■□ 3.11
CAPNS1-211ENST00000590874 SMC1BQ8NDV3 1235 aa34.44■■■■□ 3.1
CAPNS1-211ENST00000590874 KLRG1Q96E93 195 aa34.44■■■■□ 3.1
CAPNS1-211ENST00000590874 BRIP1Q9BX63 1249 aa34.44■■■■□ 3.1
CAPNS1-211ENST00000590874 ZNF622Q969S3 477 aaKnown RBP eCLIP34.43■■■■□ 3.1
CAPNS1-211ENST00000590874 TIAM2Q8IVF5 1701 aa34.43■■■■□ 3.1
CAPNS1-211ENST00000590874 COL11A2P13942 1736 aaPredicted RBP34.42■■■■□ 3.1
CAPNS1-211ENST00000590874 BTBD11A6QL63 1104 aa34.42■■■■□ 3.1
CAPNS1-211ENST00000590874 CAMTA2O94983 1202 aa34.42■■■■□ 3.1
CAPNS1-211ENST00000590874 PDE6BP35913 854 aa34.41■■■■□ 3.1
CAPNS1-211ENST00000590874 ZNF219Q9P2Y4 722 aaPredicted RBP34.4■■■■□ 3.1
CAPNS1-211ENST00000590874 C21orf2O43822 256 aa34.39■■■■□ 3.1
CAPNS1-211ENST00000590874 VEGFAP15692 232 aaPredicted RBP34.39■■■■□ 3.1
CAPNS1-211ENST00000590874 CFAP53Q96M91 514 aa34.39■■■■□ 3.1
CAPNS1-211ENST00000590874 PDZRN3Q9UPQ7 1066 aa34.39■■■■□ 3.1
CAPNS1-211ENST00000590874 JMYQ8N9B5 988 aa34.38■■■■□ 3.09
CAPNS1-211ENST00000590874 PIP4K2AP48426 406 aaPredicted RBP34.37■■■■□ 3.09
CAPNS1-211ENST00000590874 SETDB2Q96T68 719 aa34.37■■■■□ 3.09
CAPNS1-211ENST00000590874 USP16Q9Y5T5 823 aa34.37■■■■□ 3.09
CAPNS1-211ENST00000590874 PRAMEF22A3QJZ6 481 aa34.36■■■■□ 3.09
CAPNS1-211ENST00000590874 NPM2Q86SE8 214 aaKnown RBP34.36■■■■□ 3.09
CAPNS1-211ENST00000590874 DZIP3Q86Y13 1208 aaKnown RBP34.36■■■■□ 3.09
CAPNS1-211ENST00000590874 CNBD1Q8NA66 436 aa34.36■■■■□ 3.09
CAPNS1-211ENST00000590874 BCORQ6W2J9 1755 aa34.34■■■■□ 3.09
CAPNS1-211ENST00000590874 POTECB2RU33 542 aa34.33■■■■□ 3.09
CAPNS1-211ENST00000590874 NPHP1O15259 732 aa34.32■■■■□ 3.08
CAPNS1-211ENST00000590874 MCM10Q7L590 875 aa34.32■■■■□ 3.08
CAPNS1-211ENST00000590874 NUDCQ9Y266 331 aa34.32■■■■□ 3.08
CAPNS1-211ENST00000590874 CCDC88AQ3V6T2 1871 aa34.31■■■■□ 3.08
CAPNS1-211ENST00000590874 U2AF1L5P0DN76 240 aaPredicted RBP34.31■■■■□ 3.08
CAPNS1-211ENST00000590874 ST5P78524 1137 aa34.31■■■■□ 3.08
CAPNS1-211ENST00000590874 U2AF1Q01081 240 aaKnown RBP eCLIP34.31■■■■□ 3.08
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms