RNA–Protein interactions for RNA: ENST00000590704.5

CIRBP-229, Transcript of cold inducible RNA binding protein, humanhuman

TSL 2

Gene CIRBP, Length 1,456 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CIRBP-229ENST00000590704 SNRPA1P09661 255 aaKnown RBP27.53■■■□□ 2
CIRBP-229ENST00000590704 LAS1LQ9Y4W2 734 aaKnown RBP27.53■■■□□ 2
CIRBP-229ENST00000590704 WDR63Q8IWG1 891 aa27.52■■■□□ 2
CIRBP-229ENST00000590704 NGEFQ8N5V2 710 aa27.52■■■□□ 2
CIRBP-229ENST00000590704 ZBTB1Q9Y2K1 713 aa27.52■■■□□ 2
CIRBP-229ENST00000590704 A1BGP04217 495 aa27.51■■■□□ 2
CIRBP-229ENST00000590704 IL16Q14005 1332 aa27.51■■□□□ 1.99
CIRBP-229ENST00000590704 GNPATO15228 680 aa27.51■■□□□ 1.99
CIRBP-229ENST00000590704 AK7Q96M32 723 aa27.51■■□□□ 1.99
CIRBP-229ENST00000590704 TEX13AQ9BXU3 409 aaPredicted RBP27.51■■□□□ 1.99
CIRBP-229ENST00000590704 CCDC87Q9NVE4 849 aa27.51■■□□□ 1.99
CIRBP-229ENST00000590704 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP27.5■■□□□ 1.99
CIRBP-229ENST00000590704 GNAI1P63096 354 aa27.5■■□□□ 1.99
CIRBP-229ENST00000590704 NBPF26B4DH59 902 aa27.48■■□□□ 1.99
CIRBP-229ENST00000590704 HMGB2P26583 209 aaKnown RBP27.48■■□□□ 1.99
CIRBP-229ENST00000590704 SSFA2P28290 1259 aa27.48■■□□□ 1.99
CIRBP-229ENST00000590704 NBPF10Q6P3W6 841 aaKnown RBP27.48■■□□□ 1.99
CIRBP-229ENST00000590704 NBPF15Q8N660 670 aa27.48■■□□□ 1.99
CIRBP-229ENST00000590704 SOS1Q07889 1333 aaPredicted RBP27.47■■□□□ 1.99
CIRBP-229ENST00000590704 CALD1Q05682 793 aaKnown RBP27.47■■□□□ 1.99
CIRBP-229ENST00000590704 ARHGEF1Q92888 912 aaKnown RBP27.47■■□□□ 1.99
CIRBP-229ENST00000590704 TSR2Q969E8 191 aaKnown RBP27.47■■□□□ 1.99
CIRBP-229ENST00000590704 STARD3NLO95772 234 aa27.46■■□□□ 1.99
CIRBP-229ENST00000590704 EIF5P55010 431 aaKnown RBP27.46■■□□□ 1.99
CIRBP-229ENST00000590704 PIP4K2AP48426 406 aaPredicted RBP27.45■■□□□ 1.99
CIRBP-229ENST00000590704 C8orf58Q8NAV2 365 aa27.45■■□□□ 1.99
CIRBP-229ENST00000590704 RTCBQ9Y3I0 505 aaKnown RBP27.45■■□□□ 1.99
CIRBP-229ENST00000590704 PHF14O94880 888 aa27.44■■□□□ 1.98
CIRBP-229ENST00000590704 LRP10Q7Z4F1 713 aa27.44■■□□□ 1.98
CIRBP-229ENST00000590704 PDIA6Q15084 440 aa27.44■■□□□ 1.98
CIRBP-229ENST00000590704 TSPYL6Q8N831 410 aa27.44■■□□□ 1.98
CIRBP-229ENST00000590704 SGIP1Q9BQI5 828 aa27.44■■□□□ 1.98
CIRBP-229ENST00000590704 CANXP27824 592 aaKnown RBP27.43■■□□□ 1.98
CIRBP-229ENST00000590704 LAMB4A4D0S4 1761 aa27.43■■□□□ 1.98
CIRBP-229ENST00000590704 COL24A1Q17RW2 1714 aa27.42■■□□□ 1.98
CIRBP-229ENST00000590704 FLAD1Q8NFF5 587 aa27.42■■□□□ 1.98
CIRBP-229ENST00000590704 ZBTB7AO95365 584 aa27.41■■□□□ 1.98
CIRBP-229ENST00000590704 PTGER2P43116 358 aa27.41■■□□□ 1.98
CIRBP-229ENST00000590704 TRAPPC3LQ5T215 181 aa27.41■■□□□ 1.98
CIRBP-229ENST00000590704 DUSP27Q5VZP5 1158 aa27.41■■□□□ 1.98
CIRBP-229ENST00000590704 FANCIQ9NVI1 1328 aa27.41■■□□□ 1.98
CIRBP-229ENST00000590704 C4AP0C0L4 1744 aa27.4■■□□□ 1.98
CIRBP-229ENST00000590704 ADRA2BP18089 450 aa27.4■■□□□ 1.98
CIRBP-229ENST00000590704 CDCA7LQ96GN5 454 aa27.4■■□□□ 1.98
CIRBP-229ENST00000590704 IL6STP40189 918 aaPredicted RBP27.39■■□□□ 1.98
CIRBP-229ENST00000590704 SLC16A10Q8TF71 515 aa27.39■■□□□ 1.98
CIRBP-229ENST00000590704 TRMT2AQ8IZ69 625 aaKnown RBP27.38■■□□□ 1.97
CIRBP-229ENST00000590704 ELL2O00472 640 aaPredicted RBP27.38■■□□□ 1.97
CIRBP-229ENST00000590704 BCL2L12Q9HB09 334 aa27.38■■□□□ 1.97
CIRBP-229ENST00000590704 SRP68Q9UHB9 627 aaKnown RBP27.38■■□□□ 1.97
CIRBP-229ENST00000590704 ATF5Q9Y2D1 282 aaPredicted RBP27.38■■□□□ 1.97
CIRBP-229ENST00000590704 HOXB7P09629 217 aa27.37■■□□□ 1.97
CIRBP-229ENST00000590704 SLFN5Q08AF3 891 aa27.37■■□□□ 1.97
CIRBP-229ENST00000590704 PROSER3Q2NL68 480 aa27.37■■□□□ 1.97
CIRBP-229ENST00000590704 MTFR1LQ9H019 292 aa27.37■■□□□ 1.97
CIRBP-229ENST00000590704 COL15A1P39059 1388 aa27.36■■□□□ 1.97
CIRBP-229ENST00000590704 GYS1P13807 737 aa27.36■■□□□ 1.97
CIRBP-229ENST00000590704 EIF2S2P20042 333 aaKnown RBP27.36■■□□□ 1.97
CIRBP-229ENST00000590704 USP42Q9H9J4 1324 aaKnown RBP27.35■■□□□ 1.97
CIRBP-229ENST00000590704 GOLGA2Q08379 1002 aa27.34■■□□□ 1.97
CIRBP-229ENST00000590704 ANXA1P04083 346 aa27.33■■□□□ 1.97
CIRBP-229ENST00000590704 NECTIN2Q92692 538 aa27.33■■□□□ 1.97
CIRBP-229ENST00000590704 NARFQ9UHQ1 456 aa27.33■■□□□ 1.97
CIRBP-229ENST00000590704 MSH5O43196 834 aa27.32■■□□□ 1.96
CIRBP-229ENST00000590704 RFC4P35249 363 aa27.32■■□□□ 1.96
CIRBP-229ENST00000590704 EXOSC9Q06265 439 aaKnown RBP27.32■■□□□ 1.96
CIRBP-229ENST00000590704 ERBB4Q15303 1308 aa27.32■■□□□ 1.96
CIRBP-229ENST00000590704 VAMP4O75379 141 aa27.32■■□□□ 1.96
CIRBP-229ENST00000590704 MSL1Q68DK7 614 aa27.32■■□□□ 1.96
CIRBP-229ENST00000590704 TBC1D2BQ9UPU7 963 aa27.32■■□□□ 1.96
CIRBP-229ENST00000590704 HNRNPUQ00839 825 aaKnown RBP eCLIP27.31■■□□□ 1.96
CIRBP-229ENST00000590704 USPL1Q5W0Q7 1092 aa27.31■■□□□ 1.96
CIRBP-229ENST00000590704 SPON1Q9HCB6 807 aa27.31■■□□□ 1.96
CIRBP-229ENST00000590704 CAMTA2O94983 1202 aa27.3■■□□□ 1.96
CIRBP-229ENST00000590704 FKBP8Q14318 412 aa27.3■■□□□ 1.96
CIRBP-229ENST00000590704 HDGFL1Q5TGJ6 251 aa27.29■■□□□ 1.96
CIRBP-229ENST00000590704 TTLL7Q6ZT98 887 aa27.29■■□□□ 1.96
CIRBP-229ENST00000590704 CHPF2Q9P2E5 772 aa27.29■■□□□ 1.96
CIRBP-229ENST00000590704 LRP5O75197 1615 aa27.29■■□□□ 1.96
CIRBP-229ENST00000590704 E9PSI1 815 aa27.28■■□□□ 1.96
CIRBP-229ENST00000590704 MYL6BP14649 208 aa27.28■■□□□ 1.96
CIRBP-229ENST00000590704 DDX21Q9NR30 783 aaKnown RBP eCLIP27.28■■□□□ 1.96
CIRBP-229ENST00000590704 TM4SF1P30408 202 aa27.27■■□□□ 1.96
CIRBP-229ENST00000590704 TWISTNBQ3B726 338 aaPredicted RBP27.27■■□□□ 1.96
CIRBP-229ENST00000590704 MYH16Q9H6N6 1097 aa27.27■■□□□ 1.96
CIRBP-229ENST00000590704 DZIP3Q86Y13 1208 aaKnown RBP27.25■■□□□ 1.95
CIRBP-229ENST00000590704 ZNF330Q9Y3S2 320 aaPredicted RBP27.25■■□□□ 1.95
CIRBP-229ENST00000590704 A0A087WZG4 1122 aa27.25■■□□□ 1.95
CIRBP-229ENST00000590704 HLFQ16534 295 aa27.24■■□□□ 1.95
CIRBP-229ENST00000590704 NLGN1Q8N2Q7 840 aa27.23■■□□□ 1.95
CIRBP-229ENST00000590704 BCORQ6W2J9 1755 aa27.23■■□□□ 1.95
CIRBP-229ENST00000590704 SCN7AQ01118 1682 aa27.22■■□□□ 1.95
CIRBP-229ENST00000590704 ZPR1O75312 459 aa27.22■■□□□ 1.95
CIRBP-229ENST00000590704 DDR1Q08345 913 aa27.22■■□□□ 1.95
CIRBP-229ENST00000590704 DBF4Q9UBU7 674 aaPredicted RBP27.22■■□□□ 1.95
CIRBP-229ENST00000590704 TCERG1O14776 1098 aaKnown RBP27.21■■□□□ 1.95
CIRBP-229ENST00000590704 COPS6Q7L5N1 327 aa27.21■■□□□ 1.95
CIRBP-229ENST00000590704 PHAXQ9H814 394 aaKnown RBP27.21■■□□□ 1.95
CIRBP-229ENST00000590704 ZBED9Q6R2W3 1325 aa27.21■■□□□ 1.95
CIRBP-229ENST00000590704 NFIXQ14938 502 aa27.2■■□□□ 1.95
Retrieved 100 of 20,778 RNA–protein pairs in 90.2 ms