RNA–Protein interactions for RNA: ENST00000589553.5

TMC6-212, Transcript of transmembrane channel like 6, humanhuman

TSL 2 BASIC

Gene TMC6, Length 2,389 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMC6-212ENST00000589553 BEND3Q5T5X7 828 aa25.6■■□□□ 1.69
TMC6-212ENST00000589553 ZDHHC9Q9Y397 364 aa25.6■■□□□ 1.69
TMC6-212ENST00000589553 LMO7Q8WWI1 1683 aa25.6■■□□□ 1.69
TMC6-212ENST00000589553 SRGAP3O43295 1099 aa25.6■■□□□ 1.69
TMC6-212ENST00000589553 MAP4K4O95819 1239 aaPredicted RBP25.6■■□□□ 1.69
TMC6-212ENST00000589553 AKAP4Q5JQC9 854 aa25.6■■□□□ 1.69
TMC6-212ENST00000589553 DNAAF4Q8WXU2 420 aa25.6■■□□□ 1.69
TMC6-212ENST00000589553 KLHL40Q2TBA0 621 aa25.59■■□□□ 1.69
TMC6-212ENST00000589553 HOXB7P09629 217 aa25.58■■□□□ 1.69
TMC6-212ENST00000589553 RHPN1Q8TCX5 695 aa25.58■■□□□ 1.69
TMC6-212ENST00000589553 TMX3Q96JJ7 454 aa25.58■■□□□ 1.69
TMC6-212ENST00000589553 CHAMP1Q96JM3 812 aa25.58■■□□□ 1.69
TMC6-212ENST00000589553 ADCY9O60503 1353 aa25.58■■□□□ 1.68
TMC6-212ENST00000589553 PHRF1Q9P1Y6 1649 aaKnown RBP25.57■■□□□ 1.68
TMC6-212ENST00000589553 GCP02774 474 aa25.57■■□□□ 1.68
TMC6-212ENST00000589553 NOL8Q76FK4 1167 aaKnown RBP25.57■■□□□ 1.68
TMC6-212ENST00000589553 AOX1Q06278 1338 aa25.57■■□□□ 1.68
TMC6-212ENST00000589553 PLEKHO1Q53GL0 409 aaPredicted RBP25.56■■□□□ 1.68
TMC6-212ENST00000589553 LMOD2Q6P5Q4 547 aa25.56■■□□□ 1.68
TMC6-212ENST00000589553 RAB11FIP3O75154 756 aa25.56■■□□□ 1.68
TMC6-212ENST00000589553 MCCP23508 829 aa25.56■■□□□ 1.68
TMC6-212ENST00000589553 LMBRD1Q9NUN5 540 aa25.56■■□□□ 1.68
TMC6-212ENST00000589553 ZNF142P52746 1687 aaPredicted RBP25.56■■□□□ 1.68
TMC6-212ENST00000589553 ARHGEF25Q86VW2 580 aa25.55■■□□□ 1.68
TMC6-212ENST00000589553 PI4K2BQ8TCG2 481 aa25.55■■□□□ 1.68
TMC6-212ENST00000589553 RNMTO43148 476 aaKnown RBP25.55■■□□□ 1.68
TMC6-212ENST00000589553 PROSER3Q2NL68 480 aa25.54■■□□□ 1.68
TMC6-212ENST00000589553 FOXD4L5Q5VV16 416 aaPredicted RBP25.54■■□□□ 1.68
TMC6-212ENST00000589553 FOXD4L4Q8WXT5 416 aaPredicted RBP25.54■■□□□ 1.68
TMC6-212ENST00000589553 PRAMEF22A3QJZ6 481 aa25.53■■□□□ 1.68
TMC6-212ENST00000589553 ANKRD24Q8TF21 1146 aa25.53■■□□□ 1.68
TMC6-212ENST00000589553 C1orf141Q5JVX7 400 aa25.53■■□□□ 1.68
TMC6-212ENST00000589553 KIF1BPQ96EK5 621 aa25.53■■□□□ 1.68
TMC6-212ENST00000589553 UPF3BQ9BZI7 483 aaKnown RBP25.53■■□□□ 1.68
TMC6-212ENST00000589553 NCLP19338 710 aaKnown RBP25.52■■□□□ 1.68
TMC6-212ENST00000589553 ANAPC15P60006 121 aa25.52■■□□□ 1.68
TMC6-212ENST00000589553 AXIN2Q9Y2T1 843 aa25.52■■□□□ 1.68
TMC6-212ENST00000589553 AMOTQ4VCS5 1084 aa25.51■■□□□ 1.67
TMC6-212ENST00000589553 CAVIN1Q6NZI2 390 aaKnown RBP25.51■■□□□ 1.67
TMC6-212ENST00000589553 SLIT3O75094 1523 aa25.5■■□□□ 1.67
TMC6-212ENST00000589553 PRPF40AO75400 957 aaKnown RBP25.5■■□□□ 1.67
TMC6-212ENST00000589553 DBF4Q9UBU7 674 aaPredicted RBP25.5■■□□□ 1.67
TMC6-212ENST00000589553 NCAPD2Q15021 1401 aa25.5■■□□□ 1.67
TMC6-212ENST00000589553 MAP3K2Q9Y2U5 619 aa25.49■■□□□ 1.67
TMC6-212ENST00000589553 GIGYF1O75420 1035 aaPredicted RBP25.49■■□□□ 1.67
TMC6-212ENST00000589553 MCM2P49736 904 aa25.49■■□□□ 1.67
TMC6-212ENST00000589553 CUL4AQ13619 759 aa25.48■■□□□ 1.67
TMC6-212ENST00000589553 NPHP4O75161 1426 aaPredicted RBP25.48■■□□□ 1.67
TMC6-212ENST00000589553 GPT2Q8TD30 523 aa25.47■■□□□ 1.67
TMC6-212ENST00000589553 HSPA4P34932 840 aa25.46■■□□□ 1.67
TMC6-212ENST00000589553 OS9Q13438 667 aaPredicted RBP25.46■■□□□ 1.67
TMC6-212ENST00000589553 CWF19L2Q2TBE0 894 aaKnown RBP25.46■■□□□ 1.67
TMC6-212ENST00000589553 IL17RAQ96F46 866 aa25.46■■□□□ 1.67
TMC6-212ENST00000589553 CHMP4AQ9BY43 222 aa25.46■■□□□ 1.67
TMC6-212ENST00000589553 ZSCAN23Q3MJ62 389 aa25.46■■□□□ 1.67
TMC6-212ENST00000589553 SGSM2O43147 1006 aa25.45■■□□□ 1.66
TMC6-212ENST00000589553 RBM27Q9P2N5 1060 aaKnown RBP25.45■■□□□ 1.66
TMC6-212ENST00000589553 HEG1Q9ULI3 1381 aa25.44■■□□□ 1.66
TMC6-212ENST00000589553 C9orf78Q9NZ63 289 aaPredicted RBP25.44■■□□□ 1.66
TMC6-212ENST00000589553 PA2G4Q9UQ80 394 aaKnown RBP25.44■■□□□ 1.66
TMC6-212ENST00000589553 CNTROBQ8N137 903 aa25.44■■□□□ 1.66
TMC6-212ENST00000589553 ERBB4Q15303 1308 aa25.43■■□□□ 1.66
TMC6-212ENST00000589553 RAD50Q92878 1312 aa25.43■■□□□ 1.66
TMC6-212ENST00000589553 TRPM3Q9HCF6 1732 aaPredicted RBP25.43■■□□□ 1.66
TMC6-212ENST00000589553 NASPP49321 788 aaPredicted RBP25.43■■□□□ 1.66
TMC6-212ENST00000589553 ZNF445P59923 1031 aa25.43■■□□□ 1.66
TMC6-212ENST00000589553 KSR2Q6VAB6 950 aa25.43■■□□□ 1.66
TMC6-212ENST00000589553 BRD1O95696 1058 aa25.42■■□□□ 1.66
TMC6-212ENST00000589553 MTX1Q13505 466 aa25.42■■□□□ 1.66
TMC6-212ENST00000589553 HSP90AB4PQ58FF6 505 aa25.42■■□□□ 1.66
TMC6-212ENST00000589553 KRT28Q7Z3Y7 464 aa25.42■■□□□ 1.66
TMC6-212ENST00000589553 OVOS2A0A0G2JMS6 1433 aa25.42■■□□□ 1.66
TMC6-212ENST00000589553 RGPD5Q99666 1765 aa25.42■■□□□ 1.66
TMC6-212ENST00000589553 CWC27Q6UX04 472 aaKnown RBP25.42■■□□□ 1.66
TMC6-212ENST00000589553 NSFL1CQ9UNZ2 370 aaKnown RBP25.42■■□□□ 1.66
TMC6-212ENST00000589553 CAMTA1Q9Y6Y1 1673 aa25.42■■□□□ 1.66
TMC6-212ENST00000589553 LSG1Q9H089 658 aaKnown RBP25.41■■□□□ 1.66
TMC6-212ENST00000589553 INTS4Q96HW7 963 aaKnown RBP25.41■■□□□ 1.66
TMC6-212ENST00000589553 SIPA1L3O60292 1781 aaPredicted RBP25.4■■□□□ 1.66
TMC6-212ENST00000589553 ALDH1L1O75891 902 aa25.4■■□□□ 1.66
TMC6-212ENST00000589553 ZC3H6P61129 1189 aaKnown RBP25.4■■□□□ 1.66
TMC6-212ENST00000589553 SPG7Q9UQ90 795 aa25.4■■□□□ 1.66
TMC6-212ENST00000589553 CRYBG1Q9Y4K1 1723 aa25.4■■□□□ 1.66
TMC6-212ENST00000589553 USP42Q9H9J4 1324 aaKnown RBP25.4■■□□□ 1.66
TMC6-212ENST00000589553 AIMP1Q12904 312 aaKnown RBP25.4■■□□□ 1.66
TMC6-212ENST00000589553 SNX14Q9Y5W7 946 aa25.4■■□□□ 1.66
TMC6-212ENST00000589553 RASEFQ8IZ41 740 aa25.39■■□□□ 1.66
TMC6-212ENST00000589553 EPB41L2O43491 1005 aaKnown RBP25.39■■□□□ 1.65
TMC6-212ENST00000589553 CLCN1P35523 988 aa25.39■■□□□ 1.65
TMC6-212ENST00000589553 CLASRPQ8N2M8 674 aaKnown RBP25.38■■□□□ 1.65
TMC6-212ENST00000589553 TTC41PQ6P2S7 1318 aa25.38■■□□□ 1.65
TMC6-212ENST00000589553 ADAMTSL3P82987 1691 aa25.38■■□□□ 1.65
TMC6-212ENST00000589553 GLRX3O76003 335 aaKnown RBP25.38■■□□□ 1.65
TMC6-212ENST00000589553 SLC39A6Q13433 755 aa25.38■■□□□ 1.65
TMC6-212ENST00000589553 TRIM44Q96DX7 344 aaPredicted RBP25.38■■□□□ 1.65
TMC6-212ENST00000589553 ERBB3P21860 1342 aa25.37■■□□□ 1.65
TMC6-212ENST00000589553 ESPNB1AK53 854 aa25.37■■□□□ 1.65
TMC6-212ENST00000589553 KAZALD1Q96I82 304 aa25.37■■□□□ 1.65
TMC6-212ENST00000589553 SUCLG2Q96I99 432 aa25.37■■□□□ 1.65
TMC6-212ENST00000589553 TMEM63CQ9P1W3 806 aa25.37■■□□□ 1.65
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms