RNA–Protein interactions for RNA: ENST00000589445.1

R3HDM4-205, Transcript of R3H domain containing 4, humanhuman

TSL 3

Gene R3HDM4, Length 705 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-205ENST00000589445 KRT24Q2M2I5 525 aa29.14■■■□□ 2.26
R3HDM4-205ENST00000589445 CASZ1Q86V15 1759 aa29.13■■■□□ 2.25
R3HDM4-205ENST00000589445 SLC15A2Q16348 729 aa29.13■■■□□ 2.25
R3HDM4-205ENST00000589445 AKT1S1Q96B36 256 aa29.13■■■□□ 2.25
R3HDM4-205ENST00000589445 TFCP2L1Q9NZI6 479 aa29.13■■■□□ 2.25
R3HDM4-205ENST00000589445 STARD3NLO95772 234 aa29.12■■■□□ 2.25
R3HDM4-205ENST00000589445 PHF14O94880 888 aa29.11■■■□□ 2.25
R3HDM4-205ENST00000589445 CYP19A1P11511 503 aaPredicted RBP29.11■■■□□ 2.25
R3HDM4-205ENST00000589445 GOLGA2Q08379 1002 aa29.11■■■□□ 2.25
R3HDM4-205ENST00000589445 TEX13AQ9BXU3 409 aaPredicted RBP29.11■■■□□ 2.25
R3HDM4-205ENST00000589445 MYH16Q9H6N6 1097 aa29.11■■■□□ 2.25
R3HDM4-205ENST00000589445 CCDC87Q9NVE4 849 aa29.11■■■□□ 2.25
R3HDM4-205ENST00000589445 GIGYF1O75420 1035 aaPredicted RBP29.1■■■□□ 2.25
R3HDM4-205ENST00000589445 SPINK5Q9NQ38 1064 aaPredicted RBP29.1■■■□□ 2.25
R3HDM4-205ENST00000589445 DCAF8L1A6NGE4 600 aa29.09■■■□□ 2.25
R3HDM4-205ENST00000589445 ZBTB1Q9Y2K1 713 aa29.08■■■□□ 2.25
R3HDM4-205ENST00000589445 ZNF330Q9Y3S2 320 aaPredicted RBP29.07■■■□□ 2.24
R3HDM4-205ENST00000589445 USP16Q9Y5T5 823 aa29.07■■■□□ 2.24
R3HDM4-205ENST00000589445 CANXP27824 592 aaKnown RBP29.06■■■□□ 2.24
R3HDM4-205ENST00000589445 SMIM5Q71RC9 77 aa29.06■■■□□ 2.24
R3HDM4-205ENST00000589445 ZBED9Q6R2W3 1325 aa29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 PNPLA7Q6ZV29 1317 aa29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 E9PSI1 815 aa29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 ELL2O00472 640 aaPredicted RBP29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 MSH5O43196 834 aa29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 PIP4K2AP48426 406 aaPredicted RBP29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 RC3H1Q5TC82 1133 aaKnown RBP29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 DUSP27Q5VZP5 1158 aa29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 INTS5Q6P9B9 1019 aaKnown RBP29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 NECTIN2Q92692 538 aa29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 YTHDC1Q96MU7 727 aaKnown RBP29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 RTCBQ9Y3I0 505 aaKnown RBP29.05■■■□□ 2.24
R3HDM4-205ENST00000589445 EIF2S2P20042 333 aaKnown RBP29.04■■■□□ 2.24
R3HDM4-205ENST00000589445 AMIGO3Q86WK7 504 aa29.04■■■□□ 2.24
R3HDM4-205ENST00000589445 CDCA7LQ96GN5 454 aa29.04■■■□□ 2.24
R3HDM4-205ENST00000589445 PPP1R1BQ9UD71 204 aaPredicted RBP29.04■■■□□ 2.24
R3HDM4-205ENST00000589445 SCN7AQ01118 1682 aa29.04■■■□□ 2.24
R3HDM4-205ENST00000589445 COL15A1P39059 1388 aa29.03■■■□□ 2.24
R3HDM4-205ENST00000589445 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP29.03■■■□□ 2.24
R3HDM4-205ENST00000589445 A1BGP04217 495 aa29.03■■■□□ 2.24
R3HDM4-205ENST00000589445 HDGFL1Q5TGJ6 251 aa29.02■■■□□ 2.24
R3HDM4-205ENST00000589445 C8orf58Q8NAV2 365 aa29.02■■■□□ 2.24
R3HDM4-205ENST00000589445 BCORQ6W2J9 1755 aa29.02■■■□□ 2.24
R3HDM4-205ENST00000589445 SOS1Q07889 1333 aaPredicted RBP29.01■■■□□ 2.23
R3HDM4-205ENST00000589445 SSFA2P28290 1259 aa29.01■■■□□ 2.23
R3HDM4-205ENST00000589445 RPS6KA4O75676 772 aa29■■■□□ 2.23
R3HDM4-205ENST00000589445 HOXB7P09629 217 aa29■■■□□ 2.23
R3HDM4-205ENST00000589445 EXOSC9Q06265 439 aaKnown RBP29■■■□□ 2.23
R3HDM4-205ENST00000589445 SLFN5Q08AF3 891 aa28.99■■■□□ 2.23
R3HDM4-205ENST00000589445 TWISTNBQ3B726 338 aaPredicted RBP28.99■■■□□ 2.23
R3HDM4-205ENST00000589445 TSPYL6Q8N831 410 aa28.99■■■□□ 2.23
R3HDM4-205ENST00000589445 PDGFDQ9GZP0 370 aaPredicted RBP28.99■■■□□ 2.23
R3HDM4-205ENST00000589445 NPM2Q86SE8 214 aaKnown RBP28.98■■■□□ 2.23
R3HDM4-205ENST00000589445 SPON1Q9HCB6 807 aa28.98■■■□□ 2.23
R3HDM4-205ENST00000589445 MYL6BP14649 208 aa28.97■■■□□ 2.23
R3HDM4-205ENST00000589445 COL23A1Q86Y22 540 aaPredicted RBP28.97■■■□□ 2.23
R3HDM4-205ENST00000589445 FLAD1Q8NFF5 587 aa28.97■■■□□ 2.23
R3HDM4-205ENST00000589445 TRAPPC3LQ5T215 181 aa28.96■■■□□ 2.23
R3HDM4-205ENST00000589445 ERBB4Q15303 1308 aa28.95■■■□□ 2.23
R3HDM4-205ENST00000589445 NBPF26B4DH59 902 aa28.95■■■□□ 2.22
R3HDM4-205ENST00000589445 ADRA2BP18089 450 aa28.95■■■□□ 2.22
R3HDM4-205ENST00000589445 NBPF10Q6P3W6 841 aaKnown RBP28.95■■■□□ 2.22
R3HDM4-205ENST00000589445 NBPF15Q8N660 670 aa28.95■■■□□ 2.22
R3HDM4-205ENST00000589445 ARXQ96QS3 562 aa28.95■■■□□ 2.22
R3HDM4-205ENST00000589445 RFC4P35249 363 aa28.94■■■□□ 2.22
R3HDM4-205ENST00000589445 IL6STP40189 918 aaPredicted RBP28.94■■■□□ 2.22
R3HDM4-205ENST00000589445 CHPF2Q9P2E5 772 aa28.94■■■□□ 2.22
R3HDM4-205ENST00000589445 ANXA1P04083 346 aa28.93■■■□□ 2.22
R3HDM4-205ENST00000589445 EIF5P55010 431 aaKnown RBP28.92■■■□□ 2.22
R3HDM4-205ENST00000589445 ARHGEF1Q92888 912 aaKnown RBP28.92■■■□□ 2.22
R3HDM4-205ENST00000589445 ZBTB7AO95365 584 aa28.91■■■□□ 2.22
R3HDM4-205ENST00000589445 PROSER3Q2NL68 480 aa28.91■■■□□ 2.22
R3HDM4-205ENST00000589445 TCERG1O14776 1098 aaKnown RBP28.9■■■□□ 2.22
R3HDM4-205ENST00000589445 MSL1Q68DK7 614 aa28.9■■■□□ 2.22
R3HDM4-205ENST00000589445 SRP68Q9UHB9 627 aaKnown RBP28.9■■■□□ 2.22
R3HDM4-205ENST00000589445 CACNA1FO60840 1977 aa28.9■■■□□ 2.22
R3HDM4-205ENST00000589445 A0A087WZG4 1122 aa28.89■■■□□ 2.22
R3HDM4-205ENST00000589445 CCDC30Q5VVM6 783 aa28.89■■■□□ 2.22
R3HDM4-205ENST00000589445 USP42Q9H9J4 1324 aaKnown RBP28.89■■■□□ 2.21
R3HDM4-205ENST00000589445 ARFGEF2Q9Y6D5 1785 aa28.88■■■□□ 2.21
R3HDM4-205ENST00000589445 DZIP3Q86Y13 1208 aaKnown RBP28.88■■■□□ 2.21
R3HDM4-205ENST00000589445 STK31Q9BXU1 1019 aa28.88■■■□□ 2.21
R3HDM4-205ENST00000589445 DDX21Q9NR30 783 aaKnown RBP eCLIP28.88■■■□□ 2.21
R3HDM4-205ENST00000589445 DBF4Q9UBU7 674 aaPredicted RBP28.88■■■□□ 2.21
R3HDM4-205ENST00000589445 COL24A1Q17RW2 1714 aa28.88■■■□□ 2.21
R3HDM4-205ENST00000589445 ZPR1O75312 459 aa28.87■■■□□ 2.21
R3HDM4-205ENST00000589445 CHMP4AQ9BY43 222 aa28.87■■■□□ 2.21
R3HDM4-205ENST00000589445 TBC1D2BQ9UPU7 963 aa28.87■■■□□ 2.21
R3HDM4-205ENST00000589445 ANKRD36CQ5JPF3 1778 aa28.86■■■□□ 2.21
R3HDM4-205ENST00000589445 PDIA6Q15084 440 aa28.86■■■□□ 2.21
R3HDM4-205ENST00000589445 KIF6Q6ZMV9 814 aa28.86■■■□□ 2.21
R3HDM4-205ENST00000589445 TRMT2AQ8IZ69 625 aaKnown RBP28.86■■■□□ 2.21
R3HDM4-205ENST00000589445 NUP98P52948 1817 aa28.85■■■□□ 2.21
R3HDM4-205ENST00000589445 USPL1Q5W0Q7 1092 aa28.85■■■□□ 2.21
R3HDM4-205ENST00000589445 VAMP4O75379 141 aa28.84■■■□□ 2.21
R3HDM4-205ENST00000589445 MTFR1LQ9H019 292 aa28.84■■■□□ 2.21
R3HDM4-205ENST00000589445 NARFQ9UHQ1 456 aa28.84■■■□□ 2.21
R3HDM4-205ENST00000589445 AIMP1Q12904 312 aaKnown RBP28.83■■■□□ 2.21
R3HDM4-205ENST00000589445 SLC16A10Q8TF71 515 aa28.83■■■□□ 2.21
R3HDM4-205ENST00000589445 ATF5Q9Y2D1 282 aaPredicted RBP28.83■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms