RNA–Protein interactions for RNA: ENST00000589126.5

PRKCSH-208, Transcript of protein kinase C substrate 80K-H, humanhuman

TSL 5

Gene PRKCSH, Length 625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCSH-208ENST00000589126 COL15A1P39059 1388 aa17.92■□□□□ 0.46
PRKCSH-208ENST00000589126 STARD3NLO95772 234 aa17.92■□□□□ 0.46
PRKCSH-208ENST00000589126 NEFMP07197 916 aa17.92■□□□□ 0.46
PRKCSH-208ENST00000589126 YBX3P16989 372 aaKnown RBP eCLIP17.92■□□□□ 0.464e-10■■□□□ 13.8
PRKCSH-208ENST00000589126 CANXP27824 592 aaKnown RBP17.92■□□□□ 0.46
PRKCSH-208ENST00000589126 PELP1Q8IZL8 1130 aaKnown RBP17.92■□□□□ 0.46
PRKCSH-208ENST00000589126 KIF13BQ9NQT8 1826 aa17.91■□□□□ 0.46
PRKCSH-208ENST00000589126 PRAMEF22A3QJZ6 481 aa17.91■□□□□ 0.46
PRKCSH-208ENST00000589126 TAF7Q15545 349 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-208ENST00000589126 USPL1Q5W0Q7 1092 aa17.91■□□□□ 0.46
PRKCSH-208ENST00000589126 THUMPD2Q9BTF0 503 aaKnown RBP17.91■□□□□ 0.46
PRKCSH-208ENST00000589126 TEX13AQ9BXU3 409 aaPredicted RBP17.91■□□□□ 0.46
PRKCSH-208ENST00000589126 PNNQ9H307 717 aaKnown RBP17.91■□□□□ 0.46
PRKCSH-208ENST00000589126 KIAA1551Q9HCM1 1747 aa17.9■□□□□ 0.46
PRKCSH-208ENST00000589126 EIF5P55010 431 aaKnown RBP17.9■□□□□ 0.46
PRKCSH-208ENST00000589126 DDR1Q08345 913 aa17.9■□□□□ 0.46
PRKCSH-208ENST00000589126 MIS18AQ9NYP9 233 aa17.9■□□□□ 0.46
PRKCSH-208ENST00000589126 NARFQ9UHQ1 456 aa17.9■□□□□ 0.46
PRKCSH-208ENST00000589126 MAPK8IP3Q9UPT6 1336 aa17.9■□□□□ 0.46
PRKCSH-208ENST00000589126 C10orf71Q711Q0 1435 aa17.89■□□□□ 0.46
PRKCSH-208ENST00000589126 ZPR1O75312 459 aa17.89■□□□□ 0.45
PRKCSH-208ENST00000589126 A1BGP04217 495 aa17.89■□□□□ 0.45
PRKCSH-208ENST00000589126 BCL2L12Q9HB09 334 aa17.89■□□□□ 0.45
PRKCSH-208ENST00000589126 USP16Q9Y5T5 823 aa17.89■□□□□ 0.45
PRKCSH-208ENST00000589126 TM4SF1P30408 202 aa17.88■□□□□ 0.45
PRKCSH-208ENST00000589126 PARP3Q9Y6F1 533 aa17.88■□□□□ 0.45
PRKCSH-208ENST00000589126 CHD4Q14839 1912 aa17.88■□□□□ 0.45
PRKCSH-208ENST00000589126 KDM3BQ7LBC6 1761 aa17.87■□□□□ 0.45
PRKCSH-208ENST00000589126 WWC3Q9ULE0 1092 aa17.87■□□□□ 0.45
PRKCSH-208ENST00000589126 PXDNLA1KZ92 1463 aa17.87■□□□□ 0.45
PRKCSH-208ENST00000589126 POLRMTO00411 1230 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-208ENST00000589126 SNRPA1P09661 255 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-208ENST00000589126 IL6STP40189 918 aaPredicted RBP17.86■□□□□ 0.45
PRKCSH-208ENST00000589126 TMPOP42166 694 aaKnown RBP17.86■□□□□ 0.45
PRKCSH-208ENST00000589126 CCDC146Q8IYE0 955 aa17.86■□□□□ 0.45
PRKCSH-208ENST00000589126 N4BP2Q86UW6 1770 aaPredicted RBP17.86■□□□□ 0.45
PRKCSH-208ENST00000589126 ZNF316A6NFI3 1004 aaPredicted RBP17.85■□□□□ 0.45
PRKCSH-208ENST00000589126 PIP4K2AP48426 406 aaPredicted RBP17.85■□□□□ 0.45
PRKCSH-208ENST00000589126 RIPK4P57078 832 aa17.85■□□□□ 0.45
PRKCSH-208ENST00000589126 NFIXQ14938 502 aa17.85■□□□□ 0.45
PRKCSH-208ENST00000589126 ADAMTS8Q9UP79 889 aa17.85■□□□□ 0.45
PRKCSH-208ENST00000589126 TGFB2P61812 414 aa17.84■□□□□ 0.45
PRKCSH-208ENST00000589126 WDR43Q15061 677 aaKnown RBP eCLIP17.84■□□□□ 0.45
PRKCSH-208ENST00000589126 TBC1D2BQ9UPU7 963 aa17.84■□□□□ 0.45
PRKCSH-208ENST00000589126 RRP7AQ9Y3A4 280 aaKnown RBP17.84■□□□□ 0.45
PRKCSH-208ENST00000589126 A0A087WZG4 1122 aa17.83■□□□□ 0.44
PRKCSH-208ENST00000589126 A0A0G2JLW4 131 aa17.83■□□□□ 0.44
PRKCSH-208ENST00000589126 GRIN3BO60391 1043 aa17.83■□□□□ 0.44
PRKCSH-208ENST00000589126 PNISRQ8TF01 805 aaKnown RBP17.83■□□□□ 0.44
PRKCSH-208ENST00000589126 RUNDC1Q96C34 613 aa17.83■□□□□ 0.44
PRKCSH-208ENST00000589126 ZNF330Q9Y3S2 320 aaPredicted RBP17.83■□□□□ 0.44
PRKCSH-208ENST00000589126 AFDNP55196 1824 aaKnown RBP17.83■□□□□ 0.44
PRKCSH-208ENST00000589126 SCN7AQ01118 1682 aa17.83■□□□□ 0.44
PRKCSH-208ENST00000589126 NRXN2Q9P2S2 1712 aa17.82■□□□□ 0.44
PRKCSH-208ENST00000589126 NBPF26B4DH59 902 aa17.82■□□□□ 0.44
PRKCSH-208ENST00000589126 DPEP1P16444 411 aa17.82■□□□□ 0.44
PRKCSH-208ENST00000589126 EIF4A1P60842 406 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-208ENST00000589126 NBPF10Q6P3W6 841 aaKnown RBP17.82■□□□□ 0.44
PRKCSH-208ENST00000589126 NBPF15Q8N660 670 aa17.82■□□□□ 0.44
PRKCSH-208ENST00000589126 KCNA3P22001 575 aa17.81■□□□□ 0.44
PRKCSH-208ENST00000589126 LAMB4A4D0S4 1761 aa17.81■□□□□ 0.44
PRKCSH-208ENST00000589126 BRCA1P38398 1863 aaKnown RBP17.8■□□□□ 0.44
PRKCSH-208ENST00000589126 GIGYF1O75420 1035 aaPredicted RBP17.8■□□□□ 0.44
PRKCSH-208ENST00000589126 CAMTA2O94983 1202 aa17.8■□□□□ 0.44
PRKCSH-208ENST00000589126 NEUROD2Q15784 382 aa17.8■□□□□ 0.44
PRKCSH-208ENST00000589126 CCDC184Q52MB2 194 aa17.8■□□□□ 0.44
PRKCSH-208ENST00000589126 TBC1D9BQ66K14 1250 aa17.8■□□□□ 0.44
PRKCSH-208ENST00000589126 TRIM35Q9UPQ4 493 aa17.8■□□□□ 0.44
PRKCSH-208ENST00000589126 BCORQ6W2J9 1755 aa17.79■□□□□ 0.44
PRKCSH-208ENST00000589126 SERPINB2P05120 415 aa17.79■□□□□ 0.44
PRKCSH-208ENST00000589126 BICDL1Q6ZP65 573 aa17.79■□□□□ 0.44
PRKCSH-208ENST00000589126 DZIP3Q86Y13 1208 aaKnown RBP17.78■□□□□ 0.44
PRKCSH-208ENST00000589126 ZNF784Q8NCA9 323 aaPredicted RBP17.78■□□□□ 0.44
PRKCSH-208ENST00000589126 CHRNA5P30532 468 aa17.77■□□□□ 0.44
PRKCSH-208ENST00000589126 LMOD3Q0VAK6 560 aa17.77■□□□□ 0.44
PRKCSH-208ENST00000589126 TSPYL4Q9UJ04 414 aa17.77■□□□□ 0.44
PRKCSH-208ENST00000589126 CARMIL3Q8ND23 1372 aa17.77■□□□□ 0.43
PRKCSH-208ENST00000589126 BCS1LQ9Y276 419 aa17.76■□□□□ 0.43
PRKCSH-208ENST00000589126 NPM2Q86SE8 214 aaKnown RBP17.75■□□□□ 0.43
PRKCSH-208ENST00000589126 BABAM1Q9NWV8 329 aa17.75■□□□□ 0.43
PRKCSH-208ENST00000589126 PIM2Q9P1W9 311 aa17.73■□□□□ 0.43
PRKCSH-208ENST00000589126 ANKRD31Q8N7Z5 1873 aa17.73■□□□□ 0.43
PRKCSH-208ENST00000589126 CHL1O00533 1208 aa17.72■□□□□ 0.43
PRKCSH-208ENST00000589126 APAF1O14727 1248 aa17.72■□□□□ 0.43
PRKCSH-208ENST00000589126 PRR5LQ6MZQ0 368 aa17.72■□□□□ 0.43
PRKCSH-208ENST00000589126 CCDC24Q8N4L8 307 aa17.72■□□□□ 0.43
PRKCSH-208ENST00000589126 SETDB2Q96T68 719 aa17.72■□□□□ 0.43
PRKCSH-208ENST00000589126 ARFGEF1Q9Y6D6 1849 aa17.72■□□□□ 0.43
PRKCSH-208ENST00000589126 HLFQ16534 295 aa17.71■□□□□ 0.43
PRKCSH-208ENST00000589126 CLEC4GQ6UXB4 293 aa17.71■□□□□ 0.43
PRKCSH-208ENST00000589126 NGEFQ8N5V2 710 aa17.71■□□□□ 0.43
PRKCSH-208ENST00000589126 DLEC1Q9Y238 1755 aa17.71■□□□□ 0.43
PRKCSH-208ENST00000589126 MYL6BP14649 208 aa17.7■□□□□ 0.42
PRKCSH-208ENST00000589126 KRT24Q2M2I5 525 aa17.7■□□□□ 0.42
PRKCSH-208ENST00000589126 DALRD3Q5D0E6 543 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-208ENST00000589126 TTLL7Q6ZT98 887 aa17.7■□□□□ 0.42
PRKCSH-208ENST00000589126 LRP10Q7Z4F1 713 aa17.7■□□□□ 0.42
PRKCSH-208ENST00000589126 LAS1LQ9Y4W2 734 aaKnown RBP17.7■□□□□ 0.42
PRKCSH-208ENST00000589126 ADCY9O60503 1353 aa17.69■□□□□ 0.42
PRKCSH-208ENST00000589126 RGL2O15211 777 aa17.69■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 187 ms