RNA–Protein interactions for RNA: ENST00000588458.1

ABCA8-210, Transcript of ATP binding cassette subfamily A member 8, humanhuman

TSL 2

Gene ABCA8, Length 445 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA8-210ENST00000588458 GAS2L2Q8NHY3 880 aa17.29■□□□□ 0.36
ABCA8-210ENST00000588458 N4BP2Q86UW6 1770 aaPredicted RBP17.29■□□□□ 0.36
ABCA8-210ENST00000588458 C4AP0C0L4 1744 aa17.29■□□□□ 0.36
ABCA8-210ENST00000588458 SCN11AQ9UI33 1791 aa17.28■□□□□ 0.36
ABCA8-210ENST00000588458 CFAP53Q96M91 514 aa17.27■□□□□ 0.36
ABCA8-210ENST00000588458 COL15A1P39059 1388 aa17.27■□□□□ 0.35
ABCA8-210ENST00000588458 NPC1L1Q9UHC9 1359 aa17.27■□□□□ 0.35
ABCA8-210ENST00000588458 SERPINB2P05120 415 aa17.26■□□□□ 0.35
ABCA8-210ENST00000588458 BICDL1Q6ZP65 573 aa17.26■□□□□ 0.35
ABCA8-210ENST00000588458 ZNF496Q96IT1 587 aaPredicted RBP17.26■□□□□ 0.35
ABCA8-210ENST00000588458 ZNF330Q9Y3S2 320 aaPredicted RBP17.26■□□□□ 0.35
ABCA8-210ENST00000588458 KIF13BQ9NQT8 1826 aa17.26■□□□□ 0.35
ABCA8-210ENST00000588458 ZNF790Q6PG37 636 aa17.25■□□□□ 0.35
ABCA8-210ENST00000588458 TEX13AQ9BXU3 409 aaPredicted RBP17.25■□□□□ 0.35
ABCA8-210ENST00000588458 BCL2L12Q9HB09 334 aa17.25■□□□□ 0.35
ABCA8-210ENST00000588458 NMRK2Q9NPI5 230 aa17.25■□□□□ 0.35
ABCA8-210ENST00000588458 A0A087WZG4 1122 aa17.24■□□□□ 0.35
ABCA8-210ENST00000588458 PHACTR3Q96KR7 559 aa17.24■□□□□ 0.35
ABCA8-210ENST00000588458 RNF181Q9P0P0 153 aa17.24■□□□□ 0.35
ABCA8-210ENST00000588458 NUDCQ9Y266 331 aa17.24■□□□□ 0.35
ABCA8-210ENST00000588458 CEP350Q5VT06 3117 aa17.24■□□□□ 0.35
ABCA8-210ENST00000588458 TJP1Q07157 1748 aa17.24■□□□□ 0.35
ABCA8-210ENST00000588458 TOMM70O94826 608 aa17.23■□□□□ 0.35
ABCA8-210ENST00000588458 PRKAR2BP31323 418 aa17.23■□□□□ 0.35
ABCA8-210ENST00000588458 EIF5P55010 431 aaKnown RBP17.23■□□□□ 0.35
ABCA8-210ENST00000588458 NPM2Q86SE8 214 aaKnown RBP17.23■□□□□ 0.35
ABCA8-210ENST00000588458 MRC1P22897 1456 aa17.23■□□□□ 0.35
ABCA8-210ENST00000588458 KCPQ6ZWJ8 1503 aa17.22■□□□□ 0.35
ABCA8-210ENST00000588458 KIAA1551Q9HCM1 1747 aa17.22■□□□□ 0.35
ABCA8-210ENST00000588458 C2CD5Q86YS7 1000 aa17.22■□□□□ 0.35
ABCA8-210ENST00000588458 C16orf71Q8IYS4 520 aaPredicted RBP17.22■□□□□ 0.35
ABCA8-210ENST00000588458 FMNL2Q96PY5 1086 aa17.22■□□□□ 0.35
ABCA8-210ENST00000588458 TBC1D2BQ9UPU7 963 aa17.22■□□□□ 0.35
ABCA8-210ENST00000588458 HEG1Q9ULI3 1381 aa17.21■□□□□ 0.35
ABCA8-210ENST00000588458 BTBD11A6QL63 1104 aa17.21■□□□□ 0.35
ABCA8-210ENST00000588458 H0YIN7 160 aa17.21■□□□□ 0.35
ABCA8-210ENST00000588458 A1BGP04217 495 aa17.21■□□□□ 0.35
ABCA8-210ENST00000588458 U2AF1L5P0DN76 240 aaPredicted RBP17.21■□□□□ 0.35
ABCA8-210ENST00000588458 U2AF1Q01081 240 aaKnown RBP eCLIP17.21■□□□□ 0.35
ABCA8-210ENST00000588458 TTLL6Q8N841 843 aa17.21■□□□□ 0.35
ABCA8-210ENST00000588458 KCNQ3O43525 872 aa17.2■□□□□ 0.34
ABCA8-210ENST00000588458 TBC1D9BQ66K14 1250 aa17.2■□□□□ 0.34
ABCA8-210ENST00000588458 RSPH6AQ9H0K4 717 aa17.2■□□□□ 0.34
ABCA8-210ENST00000588458 COL3A1P02461 1466 aaPredicted RBP17.19■□□□□ 0.34
ABCA8-210ENST00000588458 RTF1Q92541 710 aaKnown RBP17.19■□□□□ 0.34
ABCA8-210ENST00000588458 RRAGCQ9HB90 399 aa17.19■□□□□ 0.34
ABCA8-210ENST00000588458 KDM2BQ8NHM5 1336 aa17.19■□□□□ 0.34
ABCA8-210ENST00000588458 PPP2R1AP30153 589 aa17.18■□□□□ 0.34
ABCA8-210ENST00000588458 IL6STP40189 918 aaPredicted RBP17.18■□□□□ 0.34
ABCA8-210ENST00000588458 APLP1P51693 650 aa17.18■□□□□ 0.34
ABCA8-210ENST00000588458 RASSF7Q02833 373 aa17.18■□□□□ 0.34
ABCA8-210ENST00000588458 CCDC24Q8N4L8 307 aa17.18■□□□□ 0.34
ABCA8-210ENST00000588458 ZNF622Q969S3 477 aaKnown RBP eCLIP17.18■□□□□ 0.34
ABCA8-210ENST00000588458 NPHP1O15259 732 aa17.17■□□□□ 0.34
ABCA8-210ENST00000588458 MCM10Q7L590 875 aa17.16■□□□□ 0.34
ABCA8-210ENST00000588458 RBM46Q8TBY0 533 aaKnown RBP17.16■□□□□ 0.34
ABCA8-210ENST00000588458 SETDB2Q96T68 719 aa17.16■□□□□ 0.34
ABCA8-210ENST00000588458 ZNF219Q9P2Y4 722 aaPredicted RBP17.16■□□□□ 0.34
ABCA8-210ENST00000588458 USP16Q9Y5T5 823 aa17.16■□□□□ 0.34
ABCA8-210ENST00000588458 ADAMTS7Q9UKP4 1686 aa17.16■□□□□ 0.34
ABCA8-210ENST00000588458 CEMIPQ8WUJ3 1361 aa17.15■□□□□ 0.34
ABCA8-210ENST00000588458 LMNB1P20700 586 aa17.15■□□□□ 0.34
ABCA8-210ENST00000588458 PDE6BP35913 854 aa17.15■□□□□ 0.34
ABCA8-210ENST00000588458 BRIP1Q9BX63 1249 aa17.15■□□□□ 0.34
ABCA8-210ENST00000588458 BRCA1P38398 1863 aaKnown RBP17.14■□□□□ 0.33
ABCA8-210ENST00000588458 PIP4K2AP48426 406 aaPredicted RBP17.14■□□□□ 0.33
ABCA8-210ENST00000588458 DCTN1Q14203 1278 aa17.14■□□□□ 0.33
ABCA8-210ENST00000588458 DZIP3Q86Y13 1208 aaKnown RBP17.14■□□□□ 0.33
ABCA8-210ENST00000588458 CARMIL3Q8ND23 1372 aa17.14■□□□□ 0.33
ABCA8-210ENST00000588458 ARFGEF1Q9Y6D6 1849 aa17.13■□□□□ 0.33
ABCA8-210ENST00000588458 PRAMEF22A3QJZ6 481 aa17.13■□□□□ 0.33
ABCA8-210ENST00000588458 CAMTA2O94983 1202 aa17.13■□□□□ 0.33
ABCA8-210ENST00000588458 SNRPA1P09661 255 aaKnown RBP17.13■□□□□ 0.33
ABCA8-210ENST00000588458 PRR5LQ6MZQ0 368 aa17.13■□□□□ 0.33
ABCA8-210ENST00000588458 PDZRN3Q9UPQ7 1066 aa17.13■□□□□ 0.33
ABCA8-210ENST00000588458 CNBD1Q8NA66 436 aa17.12■□□□□ 0.33
ABCA8-210ENST00000588458 VIRMAQ69YN4 1812 aaKnown RBP17.12■□□□□ 0.33
ABCA8-210ENST00000588458 C21orf2O43822 256 aa17.11■□□□□ 0.33
ABCA8-210ENST00000588458 NEFMP07197 916 aa17.11■□□□□ 0.33
ABCA8-210ENST00000588458 PRELPP51888 382 aa17.11■□□□□ 0.33
ABCA8-210ENST00000588458 FSTL1Q12841 308 aa17.11■□□□□ 0.33
ABCA8-210ENST00000588458 AFDNP55196 1824 aaKnown RBP17.1■□□□□ 0.33
ABCA8-210ENST00000588458 GLTPD2A6NH11 291 aa17.1■□□□□ 0.33
ABCA8-210ENST00000588458 NFKBIEO00221 500 aa17.1■□□□□ 0.33
ABCA8-210ENST00000588458 HTATSF1O43719 755 aaKnown RBP17.1■□□□□ 0.33
ABCA8-210ENST00000588458 ST5P78524 1137 aa17.1■□□□□ 0.33
ABCA8-210ENST00000588458 TAF7Q15545 349 aaPredicted RBP17.1■□□□□ 0.33
ABCA8-210ENST00000588458 IFFO2Q5TF58 517 aa17.1■□□□□ 0.33
ABCA8-210ENST00000588458 DNAJC5GQ8N7S2 189 aa17.1■□□□□ 0.33
ABCA8-210ENST00000588458 MIS18AQ9NYP9 233 aa17.1■□□□□ 0.33
ABCA8-210ENST00000588458 UBR2Q8IWV8 1755 aa17.1■□□□□ 0.33
ABCA8-210ENST00000588458 VEGFAP15692 232 aaPredicted RBP17.09■□□□□ 0.33
ABCA8-210ENST00000588458 HTRA3P83110 453 aa17.09■□□□□ 0.33
ABCA8-210ENST00000588458 ZC3H4Q9UPT8 1303 aaKnown RBP17.09■□□□□ 0.33
ABCA8-210ENST00000588458 DPY19L2Q6NUT2 758 aa17.08■□□□□ 0.32
ABCA8-210ENST00000588458 CLEC4GQ6UXB4 293 aa17.08■□□□□ 0.32
ABCA8-210ENST00000588458 NBPF5PQ86XG9 351 aaPredicted RBP17.08■□□□□ 0.32
ABCA8-210ENST00000588458 CNKSR1Q969H4 720 aa17.08■□□□□ 0.32
ABCA8-210ENST00000588458 ZNF652Q9Y2D9 606 aa17.08■□□□□ 0.32
ABCA8-210ENST00000588458 SMC1BQ8NDV3 1235 aa17.07■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 76.8 ms