RNA–Protein interactions for RNA: ENST00000588210.1

CCDC43-203, Transcript of coiled-coil domain containing 43, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CCDC43, Length 2,067 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC43-203ENST00000588210 TAF7Q15545 349 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-203ENST00000588210 RBM42Q9BTD8 480 aaKnown RBP18.52■□□□□ 0.56
CCDC43-203ENST00000588210 DAXXQ9UER7 740 aaPredicted RBP18.52■□□□□ 0.56
CCDC43-203ENST00000588210 PAPPAQ13219 1627 aa18.52■□□□□ 0.55
CCDC43-203ENST00000588210 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
CCDC43-203ENST00000588210 KCNQ4P56696 695 aa18.51■□□□□ 0.55
CCDC43-203ENST00000588210 TTC5Q8N0Z6 440 aa18.51■□□□□ 0.55
CCDC43-203ENST00000588210 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
CCDC43-203ENST00000588210 ZNF790Q6PG37 636 aa18.51■□□□□ 0.55
CCDC43-203ENST00000588210 ZNF831Q5JPB2 1677 aa18.5■□□□□ 0.55
CCDC43-203ENST00000588210 PTCD1O75127 700 aaKnown RBP18.5■□□□□ 0.55
CCDC43-203ENST00000588210 THUMPD2Q9BTF0 503 aaKnown RBP18.5■□□□□ 0.55
CCDC43-203ENST00000588210 MYH16Q9H6N6 1097 aa18.5■□□□□ 0.55
CCDC43-203ENST00000588210 FRAT1Q92837 279 aaPredicted RBP18.5■□□□□ 0.55
CCDC43-203ENST00000588210 STK32BQ9NY57 414 aa18.5■□□□□ 0.55
CCDC43-203ENST00000588210 SLC4A9Q96Q91 983 aa18.49■□□□□ 0.55
CCDC43-203ENST00000588210 SLC15A2Q16348 729 aa18.48■□□□□ 0.55
CCDC43-203ENST00000588210 ANO8Q9HCE9 1232 aaPredicted RBP18.48■□□□□ 0.55
CCDC43-203ENST00000588210 VSIG10Q8N0Z9 540 aa18.48■□□□□ 0.55
CCDC43-203ENST00000588210 C5P01031 1676 aa18.48■□□□□ 0.55
CCDC43-203ENST00000588210 KCPQ6ZWJ8 1503 aa18.47■□□□□ 0.55
CCDC43-203ENST00000588210 TAF1LQ8IZX4 1826 aa18.47■□□□□ 0.55
CCDC43-203ENST00000588210 UBR2Q8IWV8 1755 aa18.47■□□□□ 0.55
CCDC43-203ENST00000588210 SLC4A3P48751 1232 aa18.47■□□□□ 0.55
CCDC43-203ENST00000588210 ITPK1Q13572 414 aa18.47■□□□□ 0.55
CCDC43-203ENST00000588210 NFKBIBQ15653 356 aa18.47■□□□□ 0.55
CCDC43-203ENST00000588210 AKT1S1Q96B36 256 aa18.47■□□□□ 0.55
CCDC43-203ENST00000588210 CT47B1P0C2W7 299 aaPredicted RBP18.46■□□□□ 0.55
CCDC43-203ENST00000588210 BABAM1Q9NWV8 329 aa18.46■□□□□ 0.55
CCDC43-203ENST00000588210 RLBP1P12271 317 aa18.46■□□□□ 0.55
CCDC43-203ENST00000588210 R3HDM1Q15032 1099 aaKnown RBP18.46■□□□□ 0.55
CCDC43-203ENST00000588210 FMNL2Q96PY5 1086 aa18.46■□□□□ 0.55
CCDC43-203ENST00000588210 ZNF496Q96IT1 587 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-203ENST00000588210 KCNQ3O43525 872 aa18.45■□□□□ 0.54
CCDC43-203ENST00000588210 CALD1Q05682 793 aaKnown RBP18.45■□□□□ 0.54
CCDC43-203ENST00000588210 ZNF827Q17R98 1081 aa18.45■□□□□ 0.54
CCDC43-203ENST00000588210 LINC00116Q8NCU8 138 aa18.45■□□□□ 0.54
CCDC43-203ENST00000588210 MIS18AQ9NYP9 233 aa18.45■□□□□ 0.54
CCDC43-203ENST00000588210 CICQ96RK0 1608 aaPredicted RBP18.45■□□□□ 0.54
CCDC43-203ENST00000588210 C4BP0C0L5 1744 aa18.44■□□□□ 0.54
CCDC43-203ENST00000588210 HEG1Q9ULI3 1381 aa18.44■□□□□ 0.54
CCDC43-203ENST00000588210 PSDA5PKW4 1024 aaPredicted RBP18.43■□□□□ 0.54
CCDC43-203ENST00000588210 PCDHB15Q9Y5E8 787 aa18.43■□□□□ 0.54
CCDC43-203ENST00000588210 TFCP2L1Q9NZI6 479 aa18.43■□□□□ 0.54
CCDC43-203ENST00000588210 TSPYL4Q9UJ04 414 aa18.43■□□□□ 0.54
CCDC43-203ENST00000588210 TNNQ9UQP3 1299 aa18.43■□□□□ 0.54
CCDC43-203ENST00000588210 KDM3BQ7LBC6 1761 aa18.42■□□□□ 0.54
CCDC43-203ENST00000588210 AK7Q96M32 723 aa18.42■□□□□ 0.54
CCDC43-203ENST00000588210 TEX13AQ9BXU3 409 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-203ENST00000588210 COL5A3P25940 1745 aaPredicted RBP18.42■□□□□ 0.54
CCDC43-203ENST00000588210 TJP1Q07157 1748 aa18.42■□□□□ 0.54
CCDC43-203ENST00000588210 RC3H1Q5TC82 1133 aaKnown RBP18.42■□□□□ 0.54
CCDC43-203ENST00000588210 DNAJC10Q8IXB1 793 aa18.42■□□□□ 0.54
CCDC43-203ENST00000588210 CNTNAP4Q9C0A0 1308 aa18.41■□□□□ 0.54
CCDC43-203ENST00000588210 CHL1O00533 1208 aa18.41■□□□□ 0.54
CCDC43-203ENST00000588210 MVPQ14764 893 aaKnown RBP18.41■□□□□ 0.54
CCDC43-203ENST00000588210 CFAP44Q96MT7 982 aa18.41■□□□□ 0.54
CCDC43-203ENST00000588210 BCL2L13Q9BXK5 485 aa18.41■□□□□ 0.54
CCDC43-203ENST00000588210 ZKSCAN2Q63HK3 967 aa18.4■□□□□ 0.54
CCDC43-203ENST00000588210 RWDD1Q9H446 243 aaPredicted RBP18.4■□□□□ 0.54
CCDC43-203ENST00000588210 IL16Q14005 1332 aa18.39■□□□□ 0.54
CCDC43-203ENST00000588210 SNRPA1P09661 255 aaKnown RBP18.39■□□□□ 0.53
CCDC43-203ENST00000588210 CYP19A1P11511 503 aaPredicted RBP18.39■□□□□ 0.53
CCDC43-203ENST00000588210 EIF4A1P60842 406 aaKnown RBP18.39■□□□□ 0.53
CCDC43-203ENST00000588210 IFT57Q9NWB7 429 aa18.39■□□□□ 0.53
CCDC43-203ENST00000588210 QSER1Q2KHR3 1735 aa18.39■□□□□ 0.53
CCDC43-203ENST00000588210 STARD3NLO95772 234 aa18.38■□□□□ 0.53
CCDC43-203ENST00000588210 CRKLP46109 303 aaKnown RBP18.38■□□□□ 0.53
CCDC43-203ENST00000588210 GNAI1P63096 354 aa18.38■□□□□ 0.53
CCDC43-203ENST00000588210 FLAD1Q8NFF5 587 aa18.38■□□□□ 0.53
CCDC43-203ENST00000588210 PNPLA7Q6ZV29 1317 aa18.38■□□□□ 0.53
CCDC43-203ENST00000588210 ZNF853P0CG23 659 aa18.38■□□□□ 0.53
CCDC43-203ENST00000588210 PDZRN3Q9UPQ7 1066 aa18.38■□□□□ 0.53
CCDC43-203ENST00000588210 GNPATO15228 680 aa18.37■□□□□ 0.53
CCDC43-203ENST00000588210 SEC24BO95487 1268 aa18.37■□□□□ 0.53
CCDC43-203ENST00000588210 SSFA2P28290 1259 aa18.37■□□□□ 0.53
CCDC43-203ENST00000588210 GSE1Q14687 1217 aa18.37■□□□□ 0.53
CCDC43-203ENST00000588210 DZIP1LQ8IYY4 767 aaKnown RBP18.37■□□□□ 0.53
CCDC43-203ENST00000588210 CCDC87Q9NVE4 849 aa18.37■□□□□ 0.53
CCDC43-203ENST00000588210 RTCBQ9Y3I0 505 aaKnown RBP18.37■□□□□ 0.53
CCDC43-203ENST00000588210 TUBGCP6Q96RT7 1819 aa18.36■□□□□ 0.53
CCDC43-203ENST00000588210 GIGYF1O75420 1035 aaPredicted RBP18.36■□□□□ 0.53
CCDC43-203ENST00000588210 RPS6KA4O75676 772 aa18.36■□□□□ 0.53
CCDC43-203ENST00000588210 INTS5Q6P9B9 1019 aaKnown RBP18.36■□□□□ 0.53
CCDC43-203ENST00000588210 UBR3Q6ZT12 1888 aa18.36■□□□□ 0.53
CCDC43-203ENST00000588210 MYH14Q7Z406 1995 aaKnown RBP18.35■□□□□ 0.53
CCDC43-203ENST00000588210 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
CCDC43-203ENST00000588210 BECN1Q14457 450 aa18.35■□□□□ 0.53
CCDC43-203ENST00000588210 FTSJ3Q8IY81 847 aaKnown RBP18.35■□□□□ 0.53
CCDC43-203ENST00000588210 TSR2Q969E8 191 aaKnown RBP18.35■□□□□ 0.53
CCDC43-203ENST00000588210 MBIPQ9NS73 344 aa18.35■□□□□ 0.53
CCDC43-203ENST00000588210 CASZ1Q86V15 1759 aa18.34■□□□□ 0.53
CCDC43-203ENST00000588210 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP18.34■□□□□ 0.53
CCDC43-203ENST00000588210 PRAMEF22A3QJZ6 481 aa18.34■□□□□ 0.53
CCDC43-203ENST00000588210 EXOSC9Q06265 439 aaKnown RBP18.34■□□□□ 0.53
CCDC43-203ENST00000588210 AMIGO3Q86WK7 504 aa18.34■□□□□ 0.53
CCDC43-203ENST00000588210 COL23A1Q86Y22 540 aaPredicted RBP18.34■□□□□ 0.53
CCDC43-203ENST00000588210 PDGFDQ9GZP0 370 aaPredicted RBP18.34■□□□□ 0.53
CCDC43-203ENST00000588210 ADRA2BP18089 450 aa18.34■□□□□ 0.53
CCDC43-203ENST00000588210 SLC16A10Q8TF71 515 aa18.34■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms