RNA–Protein interactions for RNA: ENST00000587975.2

R3HDM4-203, Transcript of R3H domain containing 4, humanhuman

TSL 3 BASIC

Gene R3HDM4, Length 1,765 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM4-203ENST00000587975 RBM42Q9BTD8 480 aaKnown RBP28.58■■■□□ 2.17
R3HDM4-203ENST00000587975 HSP90AA1P07900 732 aaKnown RBP28.57■■■□□ 2.16
R3HDM4-203ENST00000587975 MTX1Q13505 466 aa28.57■■■□□ 2.16
R3HDM4-203ENST00000587975 PPP1R42Q7Z4L9 355 aa28.57■■■□□ 2.16
R3HDM4-203ENST00000587975 HYPKQ9NX55 129 aa28.57■■■□□ 2.16
R3HDM4-203ENST00000587975 NPHP3Q7Z494 1330 aa28.57■■■□□ 2.16
R3HDM4-203ENST00000587975 GBP4Q96PP9 640 aa28.57■■■□□ 2.16
R3HDM4-203ENST00000587975 COL18A1P39060 1754 aa28.56■■■□□ 2.16
R3HDM4-203ENST00000587975 RGPD5Q99666 1765 aa28.56■■■□□ 2.16
R3HDM4-203ENST00000587975 CADPS2Q86UW7 1296 aa28.56■■■□□ 2.16
R3HDM4-203ENST00000587975 ST18O60284 1047 aa28.55■■■□□ 2.16
R3HDM4-203ENST00000587975 RAPGEF4Q8WZA2 1011 aa28.55■■■□□ 2.16
R3HDM4-203ENST00000587975 KSR2Q6VAB6 950 aa28.55■■■□□ 2.16
R3HDM4-203ENST00000587975 KIF1BPQ96EK5 621 aa28.55■■■□□ 2.16
R3HDM4-203ENST00000587975 TNS3Q68CZ2 1445 aa28.54■■■□□ 2.16
R3HDM4-203ENST00000587975 CLEC17AQ6ZS10 378 aa28.54■■■□□ 2.16
R3HDM4-203ENST00000587975 IL17RAQ96F46 866 aa28.54■■■□□ 2.16
R3HDM4-203ENST00000587975 ESYT1Q9BSJ8 1104 aa28.54■■■□□ 2.16
R3HDM4-203ENST00000587975 CRYBG1Q9Y4K1 1723 aa28.54■■■□□ 2.16
R3HDM4-203ENST00000587975 STRCP1A6NGW2 1772 aa28.53■■■□□ 2.16
R3HDM4-203ENST00000587975 SCN11AQ9UI33 1791 aa28.53■■■□□ 2.16
R3HDM4-203ENST00000587975 TNPO1Q92973 898 aaKnown RBP28.52■■■□□ 2.16
R3HDM4-203ENST00000587975 SPG7Q9UQ90 795 aa28.52■■■□□ 2.16
R3HDM4-203ENST00000587975 SRGAP3O43295 1099 aa28.52■■■□□ 2.16
R3HDM4-203ENST00000587975 NBPF7P0C2Y1 421 aaPredicted RBP28.52■■■□□ 2.16
R3HDM4-203ENST00000587975 TATP17735 454 aaPredicted RBP28.52■■■□□ 2.16
R3HDM4-203ENST00000587975 ANAPC15P60006 121 aa28.52■■■□□ 2.16
R3HDM4-203ENST00000587975 L1TD1Q5T7N2 865 aaKnown RBP28.52■■■□□ 2.16
R3HDM4-203ENST00000587975 RHPN1Q8TCX5 695 aa28.52■■■□□ 2.16
R3HDM4-203ENST00000587975 SURF6O75683 361 aaKnown RBP28.51■■■□□ 2.15
R3HDM4-203ENST00000587975 DDX21Q9NR30 783 aaKnown RBP eCLIP28.51■■■□□ 2.15
R3HDM4-203ENST00000587975 DDX58O95786 925 aaKnown RBP28.5■■■□□ 2.15
R3HDM4-203ENST00000587975 CHMLP26374 656 aa28.5■■■□□ 2.15
R3HDM4-203ENST00000587975 CWC22Q9HCG8 908 aaKnown RBP28.5■■■□□ 2.15
R3HDM4-203ENST00000587975 CPDO75976 1380 aa28.5■■■□□ 2.15
R3HDM4-203ENST00000587975 MRC1P22897 1456 aa28.5■■■□□ 2.15
R3HDM4-203ENST00000587975 USP42Q9H9J4 1324 aaKnown RBP28.5■■■□□ 2.15
R3HDM4-203ENST00000587975 TRAK2O60296 914 aa28.5■■■□□ 2.15
R3HDM4-203ENST00000587975 MCCP23508 829 aa28.5■■■□□ 2.15
R3HDM4-203ENST00000587975 ZC3H6P61129 1189 aaKnown RBP28.5■■■□□ 2.15
R3HDM4-203ENST00000587975 SLC52A2Q9HAB3 445 aa28.49■■■□□ 2.15
R3HDM4-203ENST00000587975 UTYO14607 1347 aa28.48■■■□□ 2.15
R3HDM4-203ENST00000587975 HSPA2P54652 639 aa28.48■■■□□ 2.15
R3HDM4-203ENST00000587975 MAP3K2Q9Y2U5 619 aa28.48■■■□□ 2.15
R3HDM4-203ENST00000587975 KDM6AO15550 1401 aaPredicted RBP28.48■■■□□ 2.15
R3HDM4-203ENST00000587975 PHKG2P15735 406 aa28.47■■■□□ 2.15
R3HDM4-203ENST00000587975 MCM2P49736 904 aa28.47■■■□□ 2.15
R3HDM4-203ENST00000587975 LINS1Q8NG48 757 aa28.47■■■□□ 2.15
R3HDM4-203ENST00000587975 SKOR2Q2VWA4 1001 aaPredicted RBP28.47■■■□□ 2.15
R3HDM4-203ENST00000587975 NUCB2P80303 420 aa28.46■■■□□ 2.15
R3HDM4-203ENST00000587975 ZNF790Q6PG37 636 aa28.46■■■□□ 2.15
R3HDM4-203ENST00000587975 IFNL2Q8IZJ0 200 aa28.46■■■□□ 2.15
R3HDM4-203ENST00000587975 NLRP2Q9NX02 1062 aa28.46■■■□□ 2.15
R3HDM4-203ENST00000587975 PKD1L3Q7Z443 1732 aa28.45■■■□□ 2.15
R3HDM4-203ENST00000587975 TTC41PQ6P2S7 1318 aa28.45■■■□□ 2.14
R3HDM4-203ENST00000587975 TRIM6-TRIM34B2RNG4 842 aa28.45■■■□□ 2.14
R3HDM4-203ENST00000587975 ANXA1P04083 346 aa28.45■■■□□ 2.14
R3HDM4-203ENST00000587975 ERC1Q8IUD2 1116 aa28.45■■■□□ 2.14
R3HDM4-203ENST00000587975 ISY1Q9ULR0 285 aaKnown RBP28.45■■■□□ 2.14
R3HDM4-203ENST00000587975 SPATA31A3Q5VYP0 1347 aa28.44■■■□□ 2.14
R3HDM4-203ENST00000587975 MEGF6O75095 1541 aa28.44■■■□□ 2.14
R3HDM4-203ENST00000587975 TSHZ3Q63HK5 1081 aa28.44■■■□□ 2.14
R3HDM4-203ENST00000587975 PI4K2BQ8TCG2 481 aa28.44■■■□□ 2.14
R3HDM4-203ENST00000587975 PROSER3Q2NL68 480 aa28.43■■■□□ 2.14
R3HDM4-203ENST00000587975 RILPL2Q969X0 211 aa28.43■■■□□ 2.14
R3HDM4-203ENST00000587975 IL1RAPL2Q9NP60 686 aa28.43■■■□□ 2.14
R3HDM4-203ENST00000587975 C9orf78Q9NZ63 289 aaPredicted RBP28.43■■■□□ 2.14
R3HDM4-203ENST00000587975 PDIA6Q15084 440 aa28.42■■■□□ 2.14
R3HDM4-203ENST00000587975 DCAF5Q96JK2 942 aa28.42■■■□□ 2.14
R3HDM4-203ENST00000587975 FSD2A1L4K1 749 aa28.41■■■□□ 2.14
R3HDM4-203ENST00000587975 PLEKHG5O94827 1062 aa28.4■■■□□ 2.14
R3HDM4-203ENST00000587975 PARP4Q9UKK3 1724 aaKnown RBP28.39■■■□□ 2.14
R3HDM4-203ENST00000587975 GOLGA6L22H0YM25 854 aa28.39■■■□□ 2.13
R3HDM4-203ENST00000587975 GRM8O00222 908 aa28.39■■■□□ 2.13
R3HDM4-203ENST00000587975 CYP2E1P05181 493 aaPredicted RBP28.39■■■□□ 2.13
R3HDM4-203ENST00000587975 LARP1Q6PKG0 1096 aaKnown RBP28.39■■■□□ 2.13
R3HDM4-203ENST00000587975 CNTROBQ8N137 903 aa28.39■■■□□ 2.13
R3HDM4-203ENST00000587975 GLRX3O76003 335 aaKnown RBP28.38■■■□□ 2.13
R3HDM4-203ENST00000587975 NUTM1Q86Y26 1132 aa28.38■■■□□ 2.13
R3HDM4-203ENST00000587975 C5P01031 1676 aa28.38■■■□□ 2.13
R3HDM4-203ENST00000587975 UNC5CLQ8IV45 518 aa28.37■■■□□ 2.13
R3HDM4-203ENST00000587975 PRAMEF22A3QJZ6 481 aa28.37■■■□□ 2.13
R3HDM4-203ENST00000587975 CSB-PGBD3P0DP91 1061 aa28.37■■■□□ 2.13
R3HDM4-203ENST00000587975 CLASRPQ8N2M8 674 aaKnown RBP28.37■■■□□ 2.13
R3HDM4-203ENST00000587975 ANO2Q9NQ90 1003 aa28.37■■■□□ 2.13
R3HDM4-203ENST00000587975 FOXD4L1Q9NU39 408 aa28.37■■■□□ 2.13
R3HDM4-203ENST00000587975 AK9Q5TCS8 1911 aa28.36■■■□□ 2.13
R3HDM4-203ENST00000587975 GOLGA6L3A6NEY3 463 aa28.36■■■□□ 2.13
R3HDM4-203ENST00000587975 GPATCH3Q96I76 525 aa28.35■■■□□ 2.13
R3HDM4-203ENST00000587975 SSFA2P28290 1259 aa28.34■■■□□ 2.13
R3HDM4-203ENST00000587975 SNRPA1P09661 255 aaKnown RBP28.34■■■□□ 2.13
R3HDM4-203ENST00000587975 OS9Q13438 667 aaPredicted RBP28.34■■■□□ 2.13
R3HDM4-203ENST00000587975 NFATC2IPQ8NCF5 419 aa28.34■■■□□ 2.13
R3HDM4-203ENST00000587975 NEXNQ0ZGT2 675 aa28.33■■■□□ 2.13
R3HDM4-203ENST00000587975 DDX17Q92841 729 aaKnown RBP28.33■■■□□ 2.13
R3HDM4-203ENST00000587975 SGSM2O43147 1006 aa28.32■■■□□ 2.12
R3HDM4-203ENST00000587975 NEK4P51957 841 aa28.32■■■□□ 2.12
R3HDM4-203ENST00000587975 CWF19L2Q2TBE0 894 aaKnown RBP28.32■■■□□ 2.12
R3HDM4-203ENST00000587975 COL15A1P39059 1388 aa28.32■■■□□ 2.12
R3HDM4-203ENST00000587975 HSPA4P34932 840 aa28.32■■■□□ 2.12
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms