RNA–Protein interactions for RNA: ENST00000587637.2

SF3A2-203, Transcript of splicing factor 3a subunit 2, humanhuman

TSL 2

Gene SF3A2, Length 501 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A2-203ENST00000587637 DIAPH1O60610 1272 aaKnown RBP22.83■■□□□ 1.25
SF3A2-203ENST00000587637 SCN7AQ01118 1682 aa22.83■■□□□ 1.24
SF3A2-203ENST00000587637 SBF1O95248 1867 aa22.82■■□□□ 1.24
SF3A2-203ENST00000587637 CYP19A1P11511 503 aaPredicted RBP22.82■■□□□ 1.24
SF3A2-203ENST00000587637 CARMIL3Q8ND23 1372 aa22.81■■□□□ 1.24
SF3A2-203ENST00000587637 HSPA6P17066 643 aa22.8■■□□□ 1.24
SF3A2-203ENST00000587637 NMRK2Q9NPI5 230 aa22.8■■□□□ 1.24
SF3A2-203ENST00000587637 ANKRD31Q8N7Z5 1873 aa22.79■■□□□ 1.24
SF3A2-203ENST00000587637 BCL2L12Q9HB09 334 aa22.79■■□□□ 1.24
SF3A2-203ENST00000587637 COL11A2P13942 1736 aaPredicted RBP22.79■■□□□ 1.24
SF3A2-203ENST00000587637 U2SURPO15042 1029 aaKnown RBP22.78■■□□□ 1.24
SF3A2-203ENST00000587637 TM4SF1P30408 202 aa22.78■■□□□ 1.24
SF3A2-203ENST00000587637 NFIXQ14938 502 aa22.78■■□□□ 1.24
SF3A2-203ENST00000587637 C9orf131Q5VYM1 1079 aa22.78■■□□□ 1.24
SF3A2-203ENST00000587637 ZPR1O75312 459 aa22.76■■□□□ 1.23
SF3A2-203ENST00000587637 RASSF7Q02833 373 aa22.76■■□□□ 1.23
SF3A2-203ENST00000587637 TIAM2Q8IVF5 1701 aa22.75■■□□□ 1.23
SF3A2-203ENST00000587637 CANXP27824 592 aaKnown RBP22.75■■□□□ 1.23
SF3A2-203ENST00000587637 DALRD3Q5D0E6 543 aaKnown RBP22.75■■□□□ 1.23
SF3A2-203ENST00000587637 PIM2Q9P1W9 311 aa22.75■■□□□ 1.23
SF3A2-203ENST00000587637 NARFQ9UHQ1 456 aa22.74■■□□□ 1.23
SF3A2-203ENST00000587637 NPC1L1Q9UHC9 1359 aa22.74■■□□□ 1.23
SF3A2-203ENST00000587637 BCORQ6W2J9 1755 aa22.73■■□□□ 1.23
SF3A2-203ENST00000587637 CACNA1SQ13698 1873 aa22.73■■□□□ 1.23
SF3A2-203ENST00000587637 CCDC88AQ3V6T2 1871 aa22.73■■□□□ 1.23
SF3A2-203ENST00000587637 IL17REQ8NFR9 667 aa22.73■■□□□ 1.23
SF3A2-203ENST00000587637 WDR90Q96KV7 1748 aa22.72■■□□□ 1.23
SF3A2-203ENST00000587637 BICDL1Q6ZP65 573 aa22.72■■□□□ 1.23
SF3A2-203ENST00000587637 ZNF496Q96IT1 587 aaPredicted RBP22.72■■□□□ 1.23
SF3A2-203ENST00000587637 RNF181Q9P0P0 153 aa22.72■■□□□ 1.23
SF3A2-203ENST00000587637 TNRC6CQ9HCJ0 1690 aaKnown RBP22.71■■□□□ 1.23
SF3A2-203ENST00000587637 KCNQ3O43525 872 aa22.71■■□□□ 1.23
SF3A2-203ENST00000587637 PRELPP51888 382 aa22.7■■□□□ 1.22
SF3A2-203ENST00000587637 CCDC24Q8N4L8 307 aa22.7■■□□□ 1.22
SF3A2-203ENST00000587637 ZNF330Q9Y3S2 320 aaPredicted RBP22.7■■□□□ 1.22
SF3A2-203ENST00000587637 HEG1Q9ULI3 1381 aa22.7■■□□□ 1.22
SF3A2-203ENST00000587637 SERPINB2P05120 415 aa22.69■■□□□ 1.22
SF3A2-203ENST00000587637 TTC5Q8N0Z6 440 aa22.69■■□□□ 1.22
SF3A2-203ENST00000587637 PHACTR3Q96KR7 559 aa22.69■■□□□ 1.22
SF3A2-203ENST00000587637 PRKAR2BP31323 418 aa22.68■■□□□ 1.22
SF3A2-203ENST00000587637 VSIG10Q8N0Z9 540 aa22.68■■□□□ 1.22
SF3A2-203ENST00000587637 GNAT3A8MTJ3 354 aa22.67■■□□□ 1.22
SF3A2-203ENST00000587637 PIP4K2AP48426 406 aaPredicted RBP22.67■■□□□ 1.22
SF3A2-203ENST00000587637 EIF5P55010 431 aaKnown RBP22.67■■□□□ 1.22
SF3A2-203ENST00000587637 TBC1D9BQ66K14 1250 aa22.67■■□□□ 1.22
SF3A2-203ENST00000587637 GAS2L2Q8NHY3 880 aa22.67■■□□□ 1.22
SF3A2-203ENST00000587637 RSPH6AQ9H0K4 717 aa22.67■■□□□ 1.22
SF3A2-203ENST00000587637 CEMIPQ8WUJ3 1361 aa22.66■■□□□ 1.22
SF3A2-203ENST00000587637 HTRA3P83110 453 aa22.66■■□□□ 1.22
SF3A2-203ENST00000587637 TEFQ10587 303 aa22.66■■□□□ 1.22
SF3A2-203ENST00000587637 ZNF790Q6PG37 636 aa22.66■■□□□ 1.22
SF3A2-203ENST00000587637 PRAMEF22A3QJZ6 481 aa22.65■■□□□ 1.22
SF3A2-203ENST00000587637 C2CD5Q86YS7 1000 aa22.65■■□□□ 1.22
SF3A2-203ENST00000587637 TBC1D2BQ9UPU7 963 aa22.65■■□□□ 1.22
SF3A2-203ENST00000587637 TOMM70O94826 608 aa22.64■■□□□ 1.21
SF3A2-203ENST00000587637 A1BGP04217 495 aa22.63■■□□□ 1.21
SF3A2-203ENST00000587637 STARD3NLO95772 234 aa22.62■■□□□ 1.21
SF3A2-203ENST00000587637 DLG5Q8TDM6 1919 aa22.61■■□□□ 1.21
SF3A2-203ENST00000587637 FER1L6Q2WGJ9 1857 aa22.61■■□□□ 1.21
SF3A2-203ENST00000587637 ZNF219Q9P2Y4 722 aaPredicted RBP22.61■■□□□ 1.21
SF3A2-203ENST00000587637 SLX4Q8IY92 1834 aa22.6■■□□□ 1.21
SF3A2-203ENST00000587637 NFKBIEO00221 500 aa22.6■■□□□ 1.21
SF3A2-203ENST00000587637 MCM10Q7L590 875 aa22.6■■□□□ 1.21
SF3A2-203ENST00000587637 RRAGCQ9HB90 399 aa22.6■■□□□ 1.21
SF3A2-203ENST00000587637 LAMB4A4D0S4 1761 aa22.59■■□□□ 1.21
SF3A2-203ENST00000587637 ARFGEF2Q9Y6D5 1785 aa22.59■■□□□ 1.21
SF3A2-203ENST00000587637 PPP2R1AP30153 589 aa22.59■■□□□ 1.21
SF3A2-203ENST00000587637 APLP1P51693 650 aa22.59■■□□□ 1.21
SF3A2-203ENST00000587637 DCTN1Q14203 1278 aa22.59■■□□□ 1.21
SF3A2-203ENST00000587637 PRR5LQ6MZQ0 368 aa22.59■■□□□ 1.21
SF3A2-203ENST00000587637 FMNL2Q96PY5 1086 aa22.59■■□□□ 1.21
SF3A2-203ENST00000587637 BTBD11A6QL63 1104 aa22.58■■□□□ 1.21
SF3A2-203ENST00000587637 CAMTA2O94983 1202 aa22.58■■□□□ 1.21
SF3A2-203ENST00000587637 TTLL6Q8N841 843 aa22.58■■□□□ 1.21
SF3A2-203ENST00000587637 DICER1Q9UPY3 1922 aaKnown RBP22.58■■□□□ 1.21
SF3A2-203ENST00000587637 A0A087WZG4 1122 aa22.57■■□□□ 1.2
SF3A2-203ENST00000587637 RBM46Q8TBY0 533 aaKnown RBP22.57■■□□□ 1.2
SF3A2-203ENST00000587637 KDM2BQ8NHM5 1336 aa22.57■■□□□ 1.2
SF3A2-203ENST00000587637 U2AF1L5P0DN76 240 aaPredicted RBP22.56■■□□□ 1.2
SF3A2-203ENST00000587637 IL6STP40189 918 aaPredicted RBP22.56■■□□□ 1.2
SF3A2-203ENST00000587637 U2AF1Q01081 240 aaKnown RBP eCLIP22.56■■□□□ 1.2
SF3A2-203ENST00000587637 C16orf71Q8IYS4 520 aaPredicted RBP22.56■■□□□ 1.2
SF3A2-203ENST00000587637 ZNF622Q969S3 477 aaKnown RBP eCLIP22.56■■□□□ 1.2
SF3A2-203ENST00000587637 CFAP53Q96M91 514 aa22.56■■□□□ 1.2
SF3A2-203ENST00000587637 USP16Q9Y5T5 823 aa22.56■■□□□ 1.2
SF3A2-203ENST00000587637 H0YIN7 160 aa22.55■■□□□ 1.2
SF3A2-203ENST00000587637 IFFO2Q5TF58 517 aa22.55■■□□□ 1.2
SF3A2-203ENST00000587637 DNAJC5GQ8N7S2 189 aa22.55■■□□□ 1.2
SF3A2-203ENST00000587637 KDM3BQ7LBC6 1761 aa22.55■■□□□ 1.2
SF3A2-203ENST00000587637 LMNB1P20700 586 aa22.54■■□□□ 1.2
SF3A2-203ENST00000587637 C21orf2O43822 256 aa22.53■■□□□ 1.2
SF3A2-203ENST00000587637 DZIP3Q86Y13 1208 aaKnown RBP22.53■■□□□ 1.2
SF3A2-203ENST00000587637 CNBD1Q8NA66 436 aa22.51■■□□□ 1.19
SF3A2-203ENST00000587637 TEX13AQ9BXU3 409 aaPredicted RBP22.51■■□□□ 1.19
SF3A2-203ENST00000587637 NBPF26B4DH59 902 aa22.49■■□□□ 1.19
SF3A2-203ENST00000587637 NBPF10Q6P3W6 841 aaKnown RBP22.49■■□□□ 1.19
SF3A2-203ENST00000587637 NBPF15Q8N660 670 aa22.49■■□□□ 1.19
SF3A2-203ENST00000587637 BRIP1Q9BX63 1249 aa22.49■■□□□ 1.19
SF3A2-203ENST00000587637 MIS18AQ9NYP9 233 aa22.49■■□□□ 1.19
SF3A2-203ENST00000587637 NUDCQ9Y266 331 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms