RNA–Protein interactions for RNA: ENST00000587470.1

VMP1-205, Transcript of vacuole membrane protein 1, humanhuman

TSL 2

Gene VMP1, Length 995 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMP1-205ENST00000587470 ZNF295-AS1Q8N0V1 137 aa9.02□□□□□ -0.97
VMP1-205ENST00000587470 MKRN1Q9UHC7 482 aaKnown RBP9.02□□□□□ -0.97
VMP1-205ENST00000587470 NSFL1CQ9UNZ2 370 aaKnown RBP9.02□□□□□ -0.97
VMP1-205ENST00000587470 IGHA1P01876 353 aa9.01□□□□□ -0.97
VMP1-205ENST00000587470 CALR3Q96L12 384 aaKnown RBP9.01□□□□□ -0.97
VMP1-205ENST00000587470 LRRC4BQ9NT99 713 aa9.01□□□□□ -0.97
VMP1-205ENST00000587470 SCHIP1Q9P0W5 487 aaPredicted RBP9.01□□□□□ -0.97
VMP1-205ENST00000587470 TFIP11Q9UBB9 837 aaKnown RBP9.01□□□□□ -0.97
VMP1-205ENST00000587470 CLDN10P78369 228 aa9□□□□□ -0.97
VMP1-205ENST00000587470 FOXK2Q01167 660 aa9□□□□□ -0.97
VMP1-205ENST00000587470 NBPF1Q3BBV0 1214 aa9□□□□□ -0.97
VMP1-205ENST00000587470 CCDC102BQ68D86 513 aa9□□□□□ -0.97
VMP1-205ENST00000587470 LARGE2Q8N3Y3 721 aa9□□□□□ -0.97
VMP1-205ENST00000587470 DCAF5Q96JK2 942 aa9□□□□□ -0.97
VMP1-205ENST00000587470 DNAAF2Q9NVR5 837 aaKnown RBP9□□□□□ -0.97
VMP1-205ENST00000587470 CABP1Q9NZU7 370 aa9□□□□□ -0.97
VMP1-205ENST00000587470 PALM3A6NDB9 673 aaPredicted RBP8.99□□□□□ -0.97
VMP1-205ENST00000587470 C1orf229Q6ZS94 237 aaPredicted RBP8.99□□□□□ -0.97
VMP1-205ENST00000587470 OGFOD1Q8N543 542 aa8.99□□□□□ -0.97
VMP1-205ENST00000587470 TPCN2Q8NHX9 752 aa8.99□□□□□ -0.97
VMP1-205ENST00000587470 ZDHHC3Q9NYG2 299 aa8.99□□□□□ -0.97
VMP1-205ENST00000587470 USP3Q9Y6I4 520 aa8.99□□□□□ -0.97
VMP1-205ENST00000587470 ATP4AP20648 1035 aa8.98□□□□□ -0.97
VMP1-205ENST00000587470 PLA2G4EQ3MJ16 856 aa8.98□□□□□ -0.97
VMP1-205ENST00000587470 FIGNL1Q6PIW4 674 aa8.98□□□□□ -0.97
VMP1-205ENST00000587470 NLRP8Q86W28 1048 aa8.98□□□□□ -0.97
VMP1-205ENST00000587470 TNS4Q8IZW8 715 aa8.98□□□□□ -0.97
VMP1-205ENST00000587470 ENAMQ9NRM1 1142 aa8.98□□□□□ -0.97
VMP1-205ENST00000587470 KIAA1024Q9UPX6 916 aa8.98□□□□□ -0.97
VMP1-205ENST00000587470 OIP5O43482 229 aa8.97□□□□□ -0.97
VMP1-205ENST00000587470 TATP17735 454 aaPredicted RBP8.97□□□□□ -0.97
VMP1-205ENST00000587470 MAP2K3P46734 347 aa8.97□□□□□ -0.97
VMP1-205ENST00000587470 EPHA4P54764 986 aa8.97□□□□□ -0.97
VMP1-205ENST00000587470 ARSJQ5FYB0 599 aaPredicted RBP8.97□□□□□ -0.97
VMP1-205ENST00000587470 ATXN7L1Q9ULK2 861 aaPredicted RBP8.97□□□□□ -0.97
VMP1-205ENST00000587470 MAFBQ9Y5Q3 323 aaPredicted RBP8.97□□□□□ -0.97
VMP1-205ENST00000587470 PROCP04070 461 aa8.96□□□□□ -0.98
VMP1-205ENST00000587470 HOXB4P17483 251 aaPredicted RBP8.96□□□□□ -0.98
VMP1-205ENST00000587470 TEAD4Q15561 434 aa8.96□□□□□ -0.98
VMP1-205ENST00000587470 PPP1R12CQ9BZL4 782 aa8.96□□□□□ -0.98
VMP1-205ENST00000587470 NDFIP2Q9NV92 336 aa8.96□□□□□ -0.98
VMP1-205ENST00000587470 RBM19Q9Y4C8 960 aaKnown RBP8.96□□□□□ -0.98
VMP1-205ENST00000587470 A0A1W2PNR3 127 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 SHISA8B8ZZ34 492 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 M0R2N6 131 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 BNIP3LO60238 219 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 NOS2P35228 1153 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 SLC9A9Q8IVB4 645 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 SIX5Q8N196 739 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 L3MBTL2Q969R5 705 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 ZCCHC2Q9C0B9 1178 aaKnown RBP8.95□□□□□ -0.98
VMP1-205ENST00000587470 PCDHGC4Q9Y5F7 938 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 PARP3Q9Y6F1 533 aa8.95□□□□□ -0.98
VMP1-205ENST00000587470 RASA1P20936 1047 aa8.94□□□□□ -0.98
VMP1-205ENST00000587470 SNRPNP63162 240 aaKnown RBP8.94□□□□□ -0.98
VMP1-205ENST00000587470 ZDHHC1Q8WTX9 485 aa8.94□□□□□ -0.98
VMP1-205ENST00000587470 ABHD17AQ96GS6 310 aa8.94□□□□□ -0.98
VMP1-205ENST00000587470 ZIC5Q96T25 663 aa8.94□□□□□ -0.98
VMP1-205ENST00000587470 OXCT2Q9BYC2 517 aaPredicted RBP8.94□□□□□ -0.98
VMP1-205ENST00000587470 HCN2Q9UL51 889 aa8.94□□□□□ -0.98
VMP1-205ENST00000587470 PHF20L1A8MW92 1017 aa8.93□□□□□ -0.98
VMP1-205ENST00000587470 C2CD2LO14523 706 aa8.93□□□□□ -0.98
VMP1-205ENST00000587470 DKK1O94907 266 aa8.93□□□□□ -0.98
VMP1-205ENST00000587470 FGFR3P22607 806 aa8.93□□□□□ -0.98
VMP1-205ENST00000587470 BICDL1Q6ZP65 573 aa8.93□□□□□ -0.98
VMP1-205ENST00000587470 BEND7Q8N7W2 519 aaPredicted RBP8.93□□□□□ -0.98
VMP1-205ENST00000587470 KLRG1Q96E93 195 aa8.93□□□□□ -0.98
VMP1-205ENST00000587470 ZNF594Q96JF6 807 aaPredicted RBP8.93□□□□□ -0.98
VMP1-205ENST00000587470 SPOCK3Q9BQ16 436 aa8.93□□□□□ -0.98
VMP1-205ENST00000587470 ATXN7O15265 892 aaPredicted RBP8.92□□□□□ -0.98
VMP1-205ENST00000587470 TXLNAP40222 546 aa8.92□□□□□ -0.98
VMP1-205ENST00000587470 TBCELQ5QJ74 424 aa8.92□□□□□ -0.98
VMP1-205ENST00000587470 LARP1Q6PKG0 1096 aaKnown RBP8.92□□□□□ -0.98
VMP1-205ENST00000587470 NEDD1Q8NHV4 660 aa8.92□□□□□ -0.98
VMP1-205ENST00000587470 ZNF777Q9ULD5 760 aaPredicted RBP8.92□□□□□ -0.98
VMP1-205ENST00000587470 ZNF232Q9UNY5 417 aa8.92□□□□□ -0.98
VMP1-205ENST00000587470 GJA3Q9Y6H8 435 aa8.92□□□□□ -0.98
VMP1-205ENST00000587470 SERTM1A2A2V5 107 aa8.91□□□□□ -0.98
VMP1-205ENST00000587470 BMP4P12644 408 aa8.91□□□□□ -0.98
VMP1-205ENST00000587470 TSPAN10Q9H1Z9 355 aaPredicted RBP8.91□□□□□ -0.98
VMP1-205ENST00000587470 SFI1A8K8P3 1242 aa8.9□□□□□ -0.98
VMP1-205ENST00000587470 LMOD1P29536 600 aaPredicted RBP8.9□□□□□ -0.98
VMP1-205ENST00000587470 SEC13P55735 322 aa8.9□□□□□ -0.98
VMP1-205ENST00000587470 PSMA6P60900 246 aaKnown RBP8.9□□□□□ -0.98
VMP1-205ENST00000587470 CTBSQ01459 385 aa8.9□□□□□ -0.98
VMP1-205ENST00000587470 KANK4Q5T7N3 995 aaPredicted RBP8.9□□□□□ -0.98
VMP1-205ENST00000587470 TSEN2Q8NCE0 465 aaKnown RBP8.9□□□□□ -0.98
VMP1-205ENST00000587470 VRTNQ9H8Y1 702 aa8.9□□□□□ -0.98
VMP1-205ENST00000587470 GDF2Q9UK05 429 aaPredicted RBP8.9□□□□□ -0.98
VMP1-205ENST00000587470 CHMP3Q9Y3E7 222 aa8.9□□□□□ -0.98
VMP1-205ENST00000587470 EML1O00423 815 aa8.89□□□□□ -0.99
VMP1-205ENST00000587470 COL8A1P27658 744 aa8.89□□□□□ -0.99
VMP1-205ENST00000587470 TNP2Q05952 138 aa8.89□□□□□ -0.99
VMP1-205ENST00000587470 SAMD5Q5TGI4 173 aa8.89□□□□□ -0.99
VMP1-205ENST00000587470 GOLGA6L1Q8N7Z2 621 aa8.89□□□□□ -0.99
VMP1-205ENST00000587470 GPC6Q9Y625 555 aaPredicted RBP8.89□□□□□ -0.99
VMP1-205ENST00000587470 KRBA1A5PL33 1030 aa8.88□□□□□ -0.99
VMP1-205ENST00000587470 MSTNO14793 375 aa8.88□□□□□ -0.99
VMP1-205ENST00000587470 MAPTP10636 758 aaKnown RBP8.88□□□□□ -0.99
VMP1-205ENST00000587470 PTK7Q13308 1070 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms